RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 LMTK3Q96Q04 1460 aa10.96□□□□□ -0.65
LINC00649-213ENST00000608431 TDRD9Q8NDG6 1382 aaKnown RBP10.96□□□□□ -0.65
LINC00649-213ENST00000608431 TSPOAP1O95153 1857 aa10.95□□□□□ -0.66
LINC00649-213ENST00000608431 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
LINC00649-213ENST00000608431 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
LINC00649-213ENST00000608431 SOGA1O94964 1423 aa10.93□□□□□ -0.66
LINC00649-213ENST00000608431 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
LINC00649-213ENST00000608431 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
LINC00649-213ENST00000608431 DIP2BQ9P265 1576 aa10.9□□□□□ -0.66
LINC00649-213ENST00000608431 ADGRL1O94910 1474 aa10.9□□□□□ -0.66
LINC00649-213ENST00000608431 FAM69CQ0P6D2 419 aa10.9□□□□□ -0.66
LINC00649-213ENST00000608431 CEP170Q5SW79 1584 aa10.9□□□□□ -0.67
LINC00649-213ENST00000608431 DMRT2Q9Y5R5 561 aa10.89□□□□□ -0.67
LINC00649-213ENST00000608431 SHROOM2Q13796 1616 aa10.88□□□□□ -0.67
LINC00649-213ENST00000608431 SOCS7O14512 581 aa10.88□□□□□ -0.67
LINC00649-213ENST00000608431 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
LINC00649-213ENST00000608431 CCDC88BA6NC98 1476 aa10.86□□□□□ -0.67
LINC00649-213ENST00000608431 RNF216Q9NWF9 866 aaPredicted RBP10.84□□□□□ -0.67
LINC00649-213ENST00000608431 NPM1P06748 294 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00649-213ENST00000608431 FGD5Q6ZNL6 1462 aa10.82□□□□□ -0.68
LINC00649-213ENST00000608431 CSRNP3Q8WYN3 585 aa10.81□□□□□ -0.68
LINC00649-213ENST00000608431 GRIN2AQ12879 1464 aa10.8□□□□□ -0.68
LINC00649-213ENST00000608431 HOXD11P31277 338 aaPredicted RBP10.77□□□□□ -0.69
LINC00649-213ENST00000608431 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
LINC00649-213ENST00000608431 ABCA5Q8WWZ7 1642 aa10.76□□□□□ -0.69
LINC00649-213ENST00000608431 NUP160Q12769 1436 aa10.76□□□□□ -0.69
LINC00649-213ENST00000608431 ADCY10Q96PN6 1610 aa10.73□□□□□ -0.69
LINC00649-213ENST00000608431 DISP3Q9P2K9 1392 aa10.73□□□□□ -0.69
LINC00649-213ENST00000608431 ADAMTS12P58397 1594 aa10.73□□□□□ -0.69
LINC00649-213ENST00000608431 ILDR2Q71H61 639 aa10.72□□□□□ -0.69
LINC00649-213ENST00000608431 PRG4Q92954 1404 aaPredicted RBP10.72□□□□□ -0.69
LINC00649-213ENST00000608431 PPRC1Q5VV67 1664 aaKnown RBP10.72□□□□□ -0.69
LINC00649-213ENST00000608431 ZBTB22O15209 634 aa10.71□□□□□ -0.69
LINC00649-213ENST00000608431 CUX1P39880 1505 aa10.69□□□□□ -0.7
LINC00649-213ENST00000608431 ABCA10Q8WWZ4 1543 aa10.68□□□□□ -0.7
LINC00649-213ENST00000608431 GLI2P10070 1586 aa10.65□□□□□ -0.7
LINC00649-213ENST00000608431 JPH4Q96JJ6 628 aa10.64□□□□□ -0.71
LINC00649-213ENST00000608431 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
LINC00649-213ENST00000608431 SPATA31D1Q6ZQQ2 1576 aa10.63□□□□□ -0.71
LINC00649-213ENST00000608431 TEX14Q8IWB6 1497 aa10.61□□□□□ -0.71
LINC00649-213ENST00000608431 RUSC2Q8N2Y8 1516 aa10.6□□□□□ -0.71
LINC00649-213ENST00000608431 MAP3K4Q9Y6R4 1608 aa10.59□□□□□ -0.71
LINC00649-213ENST00000608431 PLB1Q6P1J6 1458 aa10.59□□□□□ -0.71
LINC00649-213ENST00000608431 COL17A1Q9UMD9 1497 aaPredicted RBP10.58□□□□□ -0.72
LINC00649-213ENST00000608431 ERICH3Q5RHP9 1530 aa10.58□□□□□ -0.72
LINC00649-213ENST00000608431 CUL7Q14999 1698 aa10.57□□□□□ -0.72
LINC00649-213ENST00000608431 PCF11O94913 1555 aaKnown RBP10.55□□□□□ -0.72
LINC00649-213ENST00000608431 KIF21BO75037 1637 aa10.55□□□□□ -0.72
LINC00649-213ENST00000608431 ASXL2Q76L83 1435 aa10.54□□□□□ -0.72
LINC00649-213ENST00000608431 CERKQ8TCT0 537 aa10.54□□□□□ -0.72
LINC00649-213ENST00000608431 ABCC2Q92887 1545 aa10.53□□□□□ -0.72
LINC00649-213ENST00000608431 KIAA0586Q9BVV6 1533 aa10.53□□□□□ -0.72
LINC00649-213ENST00000608431 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.73
LINC00649-213ENST00000608431 PTPRMP28827 1452 aa10.51□□□□□ -0.73
LINC00649-213ENST00000608431 SLC4A2P04920 1241 aa10.51□□□□□ -0.73
LINC00649-213ENST00000608431 ADAMTSL3P82987 1691 aa10.5□□□□□ -0.73
LINC00649-213ENST00000608431 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
LINC00649-213ENST00000608431 EPRSP07814 1512 aaKnown RBP10.48□□□□□ -0.73
LINC00649-213ENST00000608431 PTPRGP23470 1445 aa10.46□□□□□ -0.74
LINC00649-213ENST00000608431 CFAP43Q8NDM7 1665 aa10.44□□□□□ -0.74
LINC00649-213ENST00000608431 BIVM-ERCC5R4GMW8 1640 aa10.44□□□□□ -0.74
LINC00649-213ENST00000608431 UHRF1BP1LA0JNW5 1464 aa10.43□□□□□ -0.74
LINC00649-213ENST00000608431 BCORL1Q5H9F3 1711 aa10.42□□□□□ -0.74
LINC00649-213ENST00000608431 MADDQ8WXG6 1647 aa10.41□□□□□ -0.74
LINC00649-213ENST00000608431 ZCCHC11Q5TAX3 1644 aaKnown RBP10.4□□□□□ -0.74
LINC00649-213ENST00000608431 CARMIL2Q6F5E8 1435 aa10.4□□□□□ -0.75
LINC00649-213ENST00000608431 TNIKQ9UKE5 1360 aa10.39□□□□□ -0.75
LINC00649-213ENST00000608431 MAGI3Q5TCQ9 1506 aa10.39□□□□□ -0.75
LINC00649-213ENST00000608431 KDM5BQ9UGL1 1544 aa10.38□□□□□ -0.75
LINC00649-213ENST00000608431 RIMS1Q86UR5 1692 aaKnown RBP10.38□□□□□ -0.75
LINC00649-213ENST00000608431 TTBK1Q5TCY1 1321 aaPredicted RBP10.36□□□□□ -0.75
LINC00649-213ENST00000608431 UACAQ9BZF9 1416 aa10.36□□□□□ -0.75
LINC00649-213ENST00000608431 HSPA2P54652 639 aa10.35□□□□□ -0.75
LINC00649-213ENST00000608431 CD109Q6YHK3 1445 aa10.34□□□□□ -0.75
LINC00649-213ENST00000608431 ARAP3Q8WWN8 1544 aa10.34□□□□□ -0.75
LINC00649-213ENST00000608431 WDR7Q9Y4E6 1490 aa10.34□□□□□ -0.75
LINC00649-213ENST00000608431 DCAF8L1A6NGE4 600 aa10.32□□□□□ -0.76
LINC00649-213ENST00000608431 PREX1Q8TCU6 1659 aa10.3□□□□□ -0.76
LINC00649-213ENST00000608431 IQSEC2Q5JU85 1478 aa10.3□□□□□ -0.76
LINC00649-213ENST00000608431 ARID4BQ4LE39 1312 aaPredicted RBP10.29□□□□□ -0.76
LINC00649-213ENST00000608431 STRCQ7RTU9 1775 aa10.29□□□□□ -0.76
LINC00649-213ENST00000608431 IQGAP2Q13576 1575 aa10.28□□□□□ -0.76
LINC00649-213ENST00000608431 SETD1BQ9UPS6 1966 aaKnown RBP10.27□□□□□ -0.77
LINC00649-213ENST00000608431 PHLDB1Q86UU1 1377 aa10.26□□□□□ -0.77
LINC00649-213ENST00000608431 FER1L4A9Z1Z3 1794 aa10.26□□□□□ -0.77
LINC00649-213ENST00000608431 YEATS2Q9ULM3 1422 aa10.25□□□□□ -0.77
LINC00649-213ENST00000608431 MYCNP04198 464 aaPredicted RBP10.24□□□□□ -0.77
LINC00649-213ENST00000608431 POGZQ7Z3K3 1410 aa10.23□□□□□ -0.77
LINC00649-213ENST00000608431 TTC37Q6PGP7 1564 aa10.22□□□□□ -0.77
LINC00649-213ENST00000608431 DISP1Q96F81 1524 aa10.22□□□□□ -0.77
LINC00649-213ENST00000608431 KCNH8Q96L42 1107 aa10.21□□□□□ -0.77
LINC00649-213ENST00000608431 ARHGEF40Q8TER5 1519 aa10.21□□□□□ -0.78
LINC00649-213ENST00000608431 FANCAO15360 1455 aa10.2□□□□□ -0.78
LINC00649-213ENST00000608431 MED1Q15648 1581 aaPredicted RBP10.2□□□□□ -0.78
LINC00649-213ENST00000608431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC00649-213ENST00000608431 KIAA0556O60303 1618 aa10.18□□□□□ -0.78
LINC00649-213ENST00000608431 LTBP4Q8N2S1 1624 aa10.18□□□□□ -0.78
LINC00649-213ENST00000608431 FRMPD1Q5SYB0 1578 aa10.18□□□□□ -0.78
LINC00649-213ENST00000608431 NEO1Q92859 1461 aa10.18□□□□□ -0.78
LINC00649-213ENST00000608431 PTPRTO14522 1441 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms