RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 POLA1P09884 1462 aaPredicted RBP7.67□□□□□ -1.18
SCARNA15-201ENST00000607520 TSPY4P0CV99 314 aa7.66□□□□□ -1.18
SCARNA15-201ENST00000607520 TSPY10P0CW01 314 aa7.66□□□□□ -1.18
SCARNA15-201ENST00000607520 MTUS2Q5JR59 1369 aa7.66□□□□□ -1.18
SCARNA15-201ENST00000607520 FAM69CQ0P6D2 419 aa7.65□□□□□ -1.18
SCARNA15-201ENST00000607520 GOLGA3Q08378 1498 aa7.65□□□□□ -1.18
SCARNA15-201ENST00000607520 BCANQ96GW7 911 aa7.65□□□□□ -1.19
SCARNA15-201ENST00000607520 DNAJC5Q9H3Z4 198 aa7.65□□□□□ -1.19
SCARNA15-201ENST00000607520 RAPGEF2Q9Y4G8 1499 aa7.64□□□□□ -1.19
SCARNA15-201ENST00000607520 SNAPC4Q5SXM2 1469 aa7.64□□□□□ -1.19
SCARNA15-201ENST00000607520 URB2Q14146 1524 aaKnown RBP7.64□□□□□ -1.19
SCARNA15-201ENST00000607520 STAG3Q9UJ98 1225 aa7.64□□□□□ -1.19
SCARNA15-201ENST00000607520 TRIM52Q96A61 297 aa7.62□□□□□ -1.19
SCARNA15-201ENST00000607520 CLIP1P30622 1438 aa7.61□□□□□ -1.19
SCARNA15-201ENST00000607520 IGF1RP08069 1367 aa7.61□□□□□ -1.19
SCARNA15-201ENST00000607520 CFDP1Q9UEE9 299 aaPredicted RBP7.6□□□□□ -1.19
SCARNA15-201ENST00000607520 MAGI1Q96QZ7 1491 aaPredicted RBP7.6□□□□□ -1.19
SCARNA15-201ENST00000607520 PRG4Q92954 1404 aaPredicted RBP7.6□□□□□ -1.19
SCARNA15-201ENST00000607520 EFCAB2Q5VUJ9 269 aa7.59□□□□□ -1.19
SCARNA15-201ENST00000607520 SYNJ2O15056 1496 aa7.59□□□□□ -1.19
SCARNA15-201ENST00000607520 ZNF608Q9ULD9 1512 aaPredicted RBP7.58□□□□□ -1.2
SCARNA15-201ENST00000607520 TNIKQ9UKE5 1360 aa7.58□□□□□ -1.2
SCARNA15-201ENST00000607520 CUX1P39880 1505 aa7.58□□□□□ -1.2
SCARNA15-201ENST00000607520 SYNJ1O43426 1573 aa7.57□□□□□ -1.2
SCARNA15-201ENST00000607520 MLECQ14165 292 aa7.57□□□□□ -1.2
SCARNA15-201ENST00000607520 ABCA10Q8WWZ4 1543 aa7.56□□□□□ -1.2
SCARNA15-201ENST00000607520 WDR62O43379 1518 aa7.56□□□□□ -1.2
SCARNA15-201ENST00000607520 HRCP23327 699 aa7.56□□□□□ -1.2
SCARNA15-201ENST00000607520 FMN1Q68DA7 1419 aa7.55□□□□□ -1.2
SCARNA15-201ENST00000607520 CHGAP10645 457 aaKnown RBP7.55□□□□□ -1.2
SCARNA15-201ENST00000607520 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.54□□□□□ -1.2
SCARNA15-201ENST00000607520 KIF21AQ7Z4S6 1674 aa7.54□□□□□ -1.2
SCARNA15-201ENST00000607520 TRIM26Q12899 539 aaPredicted RBP7.54□□□□□ -1.2
SCARNA15-201ENST00000607520 CCNB3Q8WWL7 1395 aa7.53□□□□□ -1.2
SCARNA15-201ENST00000607520 ZEB1P37275 1124 aaPredicted RBP7.52□□□□□ -1.21
SCARNA15-201ENST00000607520 TOP2BQ02880 1626 aa7.52□□□□□ -1.21
SCARNA15-201ENST00000607520 GRIN2AQ12879 1464 aa7.51□□□□□ -1.21
SCARNA15-201ENST00000607520 KIAA0586Q9BVV6 1533 aa7.51□□□□□ -1.21
SCARNA15-201ENST00000607520 CHIC2Q9UKJ5 165 aa7.5□□□□□ -1.21
SCARNA15-201ENST00000607520 CCER1Q8TC90 406 aaPredicted RBP7.49□□□□□ -1.21
SCARNA15-201ENST00000607520 FHOD3Q2V2M9 1422 aa7.49□□□□□ -1.21
SCARNA15-201ENST00000607520 ERICH3Q5RHP9 1530 aa7.49□□□□□ -1.21
SCARNA15-201ENST00000607520 CEP162Q5TB80 1403 aa7.48□□□□□ -1.21
SCARNA15-201ENST00000607520 PPP1R15AO75807 674 aaPredicted RBP7.48□□□□□ -1.21
SCARNA15-201ENST00000607520 GGT6Q6P531 493 aa7.47□□□□□ -1.21
SCARNA15-201ENST00000607520 PIAS4Q8N2W9 510 aaPredicted RBP7.46□□□□□ -1.22
SCARNA15-201ENST00000607520 RUSC2Q8N2Y8 1516 aa7.46□□□□□ -1.22
SCARNA15-201ENST00000607520 RSPH4AQ5TD94 716 aa7.46□□□□□ -1.22
SCARNA15-201ENST00000607520 SPAG9O60271 1321 aaKnown RBP7.45□□□□□ -1.22
SCARNA15-201ENST00000607520 UACAQ9BZF9 1416 aa7.45□□□□□ -1.22
SCARNA15-201ENST00000607520 HDGFP51858 240 aaKnown RBP7.44□□□□□ -1.22
SCARNA15-201ENST00000607520 C14orf37Q86TY3 774 aa7.44□□□□□ -1.22
SCARNA15-201ENST00000607520 KANK1Q14678 1352 aa7.44□□□□□ -1.22
SCARNA15-201ENST00000607520 EIF4G3O43432 1585 aaKnown RBP7.43□□□□□ -1.22
SCARNA15-201ENST00000607520 CCDC18Q5T9S5 1454 aa7.43□□□□□ -1.22
SCARNA15-201ENST00000607520 SLC4A1APQ9BWU0 796 aaKnown RBP7.43□□□□□ -1.22
SCARNA15-201ENST00000607520 ZNF326Q5BKZ1 582 aaKnown RBP7.43□□□□□ -1.22
SCARNA15-201ENST00000607520 THOC2Q8NI27 1593 aaKnown RBP7.42□□□□□ -1.22
SCARNA15-201ENST00000607520 ACIN1Q9UKV3 1341 aaKnown RBP7.42□□□□□ -1.22
SCARNA15-201ENST00000607520 RRP7BPQ9NSQ0 103 aa7.41□□□□□ -1.22
SCARNA15-201ENST00000607520 CUL7Q14999 1698 aa7.41□□□□□ -1.22
SCARNA15-201ENST00000607520 KIF3BO15066 747 aa7.4□□□□□ -1.23
SCARNA15-201ENST00000607520 HNRNPMP52272 730 aaKnown RBP eCLIP7.4□□□□□ -1.23
SCARNA15-201ENST00000607520 IQGAP2Q13576 1575 aa7.4□□□□□ -1.23
SCARNA15-201ENST00000607520 PLB1Q6P1J6 1458 aa7.39□□□□□ -1.23
SCARNA15-201ENST00000607520 WDR97A6NE52 1622 aa7.39□□□□□ -1.23
SCARNA15-201ENST00000607520 PRDM2Q13029 1718 aa7.39□□□□□ -1.23
SCARNA15-201ENST00000607520 POLR3GLQ9BT43 218 aa7.38□□□□□ -1.23
SCARNA15-201ENST00000607520 CD109Q6YHK3 1445 aa7.38□□□□□ -1.23
SCARNA15-201ENST00000607520 SCAF1Q9H7N4 1312 aaKnown RBP7.38□□□□□ -1.23
SCARNA15-201ENST00000607520 WASHC2CQ9Y4E1 1318 aa7.38□□□□□ -1.23
SCARNA15-201ENST00000607520 POGZQ7Z3K3 1410 aa7.37□□□□□ -1.23
SCARNA15-201ENST00000607520 BIVM-ERCC5R4GMW8 1640 aa7.37□□□□□ -1.23
SCARNA15-201ENST00000607520 PRXQ9BXM0 1461 aa7.37□□□□□ -1.23
SCARNA15-201ENST00000607520 VPS8Q8N3P4 1428 aa7.36□□□□□ -1.23
SCARNA15-201ENST00000607520 EID1Q9Y6B2 187 aa7.36□□□□□ -1.23
SCARNA15-201ENST00000607520 NEUROD1Q13562 356 aa7.35□□□□□ -1.23
SCARNA15-201ENST00000607520 NUP160Q12769 1436 aa7.35□□□□□ -1.23
SCARNA15-201ENST00000607520 TEX14Q8IWB6 1497 aa7.34□□□□□ -1.23
SCARNA15-201ENST00000607520 ARHGEF11O15085 1522 aa7.34□□□□□ -1.23
SCARNA15-201ENST00000607520 ADAMTS12P58397 1594 aa7.34□□□□□ -1.23
SCARNA15-201ENST00000607520 RAPGEF3O95398 923 aa7.34□□□□□ -1.23
SCARNA15-201ENST00000607520 ARHGAP35Q9NRY4 1499 aa7.34□□□□□ -1.23
SCARNA15-201ENST00000607520 ANKRD30AQ9BXX3 1397 aa7.33□□□□□ -1.24
SCARNA15-201ENST00000607520 EFCAB5A4FU69 1503 aa7.33□□□□□ -1.24
SCARNA15-201ENST00000607520 ASXL2Q76L83 1435 aa7.32□□□□□ -1.24
SCARNA15-201ENST00000607520 AFAP1Q8N556 730 aa7.31□□□□□ -1.24
SCARNA15-201ENST00000607520 TARBP1Q13395 1621 aaKnown RBP7.31□□□□□ -1.24
SCARNA15-201ENST00000607520 PHLDB1Q86UU1 1377 aa7.3□□□□□ -1.24
SCARNA15-201ENST00000607520 ARHGAP5Q13017 1502 aa7.3□□□□□ -1.24
SCARNA15-201ENST00000607520 SCAPERQ9BY12 1400 aa7.3□□□□□ -1.24
SCARNA15-201ENST00000607520 HAP1P54257 671 aaPredicted RBP7.3□□□□□ -1.24
SCARNA15-201ENST00000607520 TROQ12816 1431 aaPredicted RBP7.29□□□□□ -1.24
SCARNA15-201ENST00000607520 CASKIN1Q8WXD9 1431 aa7.29□□□□□ -1.24
SCARNA15-201ENST00000607520 KCNA4P22459 653 aa7.29□□□□□ -1.24
SCARNA15-201ENST00000607520 RGL3Q3MIN7 710 aa7.28□□□□□ -1.24
SCARNA15-201ENST00000607520 CEP170Q5SW79 1584 aa7.28□□□□□ -1.24
SCARNA15-201ENST00000607520 KANK4Q5T7N3 995 aaPredicted RBP7.28□□□□□ -1.24
SCARNA15-201ENST00000607520 KIF21BO75037 1637 aa7.28□□□□□ -1.24
SCARNA15-201ENST00000607520 PLEKHH2Q8IVE3 1493 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms