RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 RUSC2Q8N2Y8 1516 aa38■■■■□ 3.67
TMEM248-207ENST00000607045 KIAA0586Q9BVV6 1533 aa37.95■■■■□ 3.67
TMEM248-207ENST00000607045 CARMIL1Q5VZK9 1371 aa37.93■■■■□ 3.66
TMEM248-207ENST00000607045 NPM1P06748 294 aaKnown RBP eCLIP37.86■■■■□ 3.65
TMEM248-207ENST00000607045 CUL7Q14999 1698 aa37.85■■■■□ 3.65
TMEM248-207ENST00000607045 FAM69CQ0P6D2 419 aa37.78■■■■□ 3.64
TMEM248-207ENST00000607045 TTBK1Q5TCY1 1321 aaPredicted RBP37.75■■■■□ 3.63
TMEM248-207ENST00000607045 ADCY10Q96PN6 1610 aa37.69■■■■□ 3.62
TMEM248-207ENST00000607045 KIF13AQ9H1H9 1805 aa37.68■■■■□ 3.62
TMEM248-207ENST00000607045 AEBP2Q6ZN18 517 aaPredicted RBP37.68■■■■□ 3.62
TMEM248-207ENST00000607045 PTPRGP23470 1445 aa37.67■■■■□ 3.62
TMEM248-207ENST00000607045 ABCC10Q5T3U5 1492 aa37.66■■■■□ 3.62
TMEM248-207ENST00000607045 MAPKBP1O60336 1514 aa37.59■■■■□ 3.61
TMEM248-207ENST00000607045 TNIKQ9UKE5 1360 aa37.56■■■■□ 3.6
TMEM248-207ENST00000607045 CARMIL2Q6F5E8 1435 aa37.56■■■■□ 3.6
TMEM248-207ENST00000607045 RAPGEF2Q9Y4G8 1499 aa37.5■■■■□ 3.59
TMEM248-207ENST00000607045 IQGAP2Q13576 1575 aa37.49■■■■□ 3.59
TMEM248-207ENST00000607045 DIP2BQ9P265 1576 aa37.46■■■■□ 3.59
TMEM248-207ENST00000607045 DISP1Q96F81 1524 aa37.42■■■■□ 3.58
TMEM248-207ENST00000607045 ABCC2Q92887 1545 aa37.36■■■■□ 3.57
TMEM248-207ENST00000607045 UACAQ9BZF9 1416 aa37.34■■■■□ 3.57
TMEM248-207ENST00000607045 UGGT2Q9NYU1 1516 aa37.31■■■■□ 3.56
TMEM248-207ENST00000607045 ASXL2Q76L83 1435 aa37.29■■■■□ 3.56
TMEM248-207ENST00000607045 UHRF1BP1LA0JNW5 1464 aa37.29■■■■□ 3.56
TMEM248-207ENST00000607045 TSPOAP1O95153 1857 aa37.24■■■■□ 3.55
TMEM248-207ENST00000607045 PLB1Q6P1J6 1458 aa37.22■■■■□ 3.55
TMEM248-207ENST00000607045 KIAA0556O60303 1618 aa37.15■■■■□ 3.54
TMEM248-207ENST00000607045 KDM5BQ9UGL1 1544 aa37.14■■■■□ 3.54
TMEM248-207ENST00000607045 PRXQ9BXM0 1461 aa37.13■■■■□ 3.54
TMEM248-207ENST00000607045 KDM6BO15054 1643 aa37.13■■■■□ 3.53
TMEM248-207ENST00000607045 GLI2P10070 1586 aa37.08■■■■□ 3.53
TMEM248-207ENST00000607045 EPRSP07814 1512 aaKnown RBP37.04■■■■□ 3.52
TMEM248-207ENST00000607045 KDM4FA0A1W2PPD8 638 aa37.02■■■■□ 3.52
TMEM248-207ENST00000607045 CSRNP3Q8WYN3 585 aa37■■■■□ 3.51
TMEM248-207ENST00000607045 GOLGA3Q08378 1498 aa36.99■■■■□ 3.51
TMEM248-207ENST00000607045 ZCCHC11Q5TAX3 1644 aaKnown RBP36.99■■■■□ 3.51
TMEM248-207ENST00000607045 CTTNBP2Q8WZ74 1663 aa36.99■■■■□ 3.51
TMEM248-207ENST00000607045 PPRC1Q5VV67 1664 aaKnown RBP36.97■■■■□ 3.51
TMEM248-207ENST00000607045 P3H3Q8IVL6 736 aa36.97■■■■□ 3.51
TMEM248-207ENST00000607045 KCNH8Q96L42 1107 aa36.92■■■■□ 3.5
TMEM248-207ENST00000607045 COL17A1Q9UMD9 1497 aaPredicted RBP36.92■■■■□ 3.5
TMEM248-207ENST00000607045 WDR7Q9Y4E6 1490 aa36.87■■■■□ 3.49
TMEM248-207ENST00000607045 ABCA8O94911 1581 aa36.86■■■■□ 3.49
TMEM248-207ENST00000607045 ARID3CA6NKF2 412 aa36.84■■■■□ 3.49
TMEM248-207ENST00000607045 MAP3K4Q9Y6R4 1608 aa36.84■■■■□ 3.49
TMEM248-207ENST00000607045 FAM9AQ8IZU1 332 aaPredicted RBP36.77■■■■□ 3.48
TMEM248-207ENST00000607045 TEX14Q8IWB6 1497 aa36.76■■■■□ 3.48
TMEM248-207ENST00000607045 CD109Q6YHK3 1445 aa36.73■■■■□ 3.47
TMEM248-207ENST00000607045 RANGAP1P46060 587 aaPredicted RBP36.72■■■■□ 3.47
TMEM248-207ENST00000607045 ATP10BO94823 1461 aa36.68■■■■□ 3.46
TMEM248-207ENST00000607045 EEA1Q15075 1411 aa36.62■■■■□ 3.45
TMEM248-207ENST00000607045 MAGI3Q5TCQ9 1506 aa36.61■■■■□ 3.45
TMEM248-207ENST00000607045 SAMD9Q5K651 1589 aa36.56■■■■□ 3.44
TMEM248-207ENST00000607045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.55■■■■□ 3.44
TMEM248-207ENST00000607045 HNRNPUL2Q1KMD3 747 aaKnown RBP36.55■■■■□ 3.44
TMEM248-207ENST00000607045 ADGRL1O94910 1474 aa36.55■■■■□ 3.44
TMEM248-207ENST00000607045 CFAP43Q8NDM7 1665 aa36.53■■■■□ 3.44
TMEM248-207ENST00000607045 FHOD3Q2V2M9 1422 aa36.47■■■■□ 3.43
TMEM248-207ENST00000607045 EHMT2Q96KQ7 1210 aa36.44■■■■□ 3.42
TMEM248-207ENST00000607045 RAPGEF6Q8TEU7 1601 aa36.42■■■■□ 3.42
TMEM248-207ENST00000607045 NUP153P49790 1475 aaKnown RBP36.39■■■■□ 3.42
TMEM248-207ENST00000607045 CHIC1Q5VXU3 224 aa36.38■■■■□ 3.41
TMEM248-207ENST00000607045 ARAP3Q8WWN8 1544 aa36.34■■■■□ 3.41
TMEM248-207ENST00000607045 PLEKHD1A6NEE1 506 aa36.32■■■■□ 3.4
TMEM248-207ENST00000607045 RAPGEF3O95398 923 aa36.32■■■■□ 3.4
TMEM248-207ENST00000607045 ABCA9Q8IUA7 1624 aa36.31■■■■□ 3.4
TMEM248-207ENST00000607045 UBTFP17480 764 aaKnown RBP36.3■■■■□ 3.4
TMEM248-207ENST00000607045 KIF21BO75037 1637 aa36.28■■■■□ 3.4
TMEM248-207ENST00000607045 PHLDB1Q86UU1 1377 aa36.27■■■■□ 3.4
TMEM248-207ENST00000607045 EFCAB5A4FU69 1503 aa36.18■■■■□ 3.38
TMEM248-207ENST00000607045 NEO1Q92859 1461 aa36.18■■■■□ 3.38
TMEM248-207ENST00000607045 ATP1B4Q9UN42 357 aaPredicted RBP36.13■■■■□ 3.37
TMEM248-207ENST00000607045 CDK13Q14004 1512 aaKnown RBP36.03■■■■□ 3.36
TMEM248-207ENST00000607045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.03■■■■□ 3.361e-7■■■■■ 38.1
TMEM248-207ENST00000607045 AKNAQ7Z591 1439 aa36.03■■■■□ 3.36
TMEM248-207ENST00000607045 ARHGAP35Q9NRY4 1499 aa36.01■■■■□ 3.36
TMEM248-207ENST00000607045 HECW2Q9P2P5 1572 aa35.99■■■■□ 3.35
TMEM248-207ENST00000607045 ARID4BQ4LE39 1312 aaPredicted RBP35.99■■■■□ 3.35
TMEM248-207ENST00000607045 FRMPD1Q5SYB0 1578 aa35.98■■■■□ 3.35
TMEM248-207ENST00000607045 FANCAO15360 1455 aa35.98■■■■□ 3.35
TMEM248-207ENST00000607045 DENND4BO75064 1496 aaPredicted RBP35.98■■■■□ 3.35
TMEM248-207ENST00000607045 FMN1Q68DA7 1419 aa35.95■■■■□ 3.35
TMEM248-207ENST00000607045 TTC37Q6PGP7 1564 aa35.93■■■■□ 3.34
TMEM248-207ENST00000607045 PLCH2O75038 1416 aa35.87■■■■□ 3.33
TMEM248-207ENST00000607045 ILDR1Q86SU0 546 aaPredicted RBP35.87■■■■□ 3.33
TMEM248-207ENST00000607045 CDK11AQ9UQ88 783 aaPredicted RBP35.87■■■■□ 3.33
TMEM248-207ENST00000607045 PTPRMP28827 1452 aa35.86■■■■□ 3.33
TMEM248-207ENST00000607045 ADAMTSL3P82987 1691 aa35.85■■■■□ 3.33
TMEM248-207ENST00000607045 RICTORQ6R327 1708 aa35.81■■■■□ 3.32
TMEM248-207ENST00000607045 SCAPERQ9BY12 1400 aa35.81■■■■□ 3.32
TMEM248-207ENST00000607045 EFCAB2Q5VUJ9 269 aa35.8■■■■□ 3.32
TMEM248-207ENST00000607045 HECW1Q76N89 1606 aa35.79■■■■□ 3.32
TMEM248-207ENST00000607045 YEATS2Q9ULM3 1422 aa35.78■■■■□ 3.32
TMEM248-207ENST00000607045 CFAP74Q9C0B2 1584 aa35.76■■■■□ 3.32
TMEM248-207ENST00000607045 BCORL1Q5H9F3 1711 aa35.75■■■■□ 3.31
TMEM248-207ENST00000607045 ARHGEF40Q8TER5 1519 aa35.73■■■■□ 3.31
TMEM248-207ENST00000607045 TROQ12816 1431 aaPredicted RBP35.71■■■■□ 3.31
TMEM248-207ENST00000607045 MADDQ8WXG6 1647 aa35.69■■■■□ 3.3
TMEM248-207ENST00000607045 MLECQ14165 292 aa35.69■■■■□ 3.3
TMEM248-207ENST00000607045 ZMYM4Q5VZL5 1548 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms