RNA–Protein interactions for RNA: ENST00000606454.1

AL390728.4-204, humanhuman

TSL 3

Gene AL390728.4, Length 660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-204ENST00000606454 KIAA0586Q9BVV6 1533 aa25.48■■□□□ 1.67
AL390728.4-204ENST00000606454 RAPGEF2Q9Y4G8 1499 aa25.48■■□□□ 1.67
AL390728.4-204ENST00000606454 SHROOM2Q13796 1616 aa25.46■■□□□ 1.67
AL390728.4-204ENST00000606454 PRG4Q92954 1404 aaPredicted RBP25.43■■□□□ 1.66
AL390728.4-204ENST00000606454 ERCC6L2Q5T890 1561 aa25.41■■□□□ 1.66
AL390728.4-204ENST00000606454 CSRNP3Q8WYN3 585 aa25.41■■□□□ 1.66
AL390728.4-204ENST00000606454 EEA1Q15075 1411 aa25.39■■□□□ 1.66
AL390728.4-204ENST00000606454 PRXQ9BXM0 1461 aa25.38■■□□□ 1.65
AL390728.4-204ENST00000606454 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
AL390728.4-204ENST00000606454 IQGAP2Q13576 1575 aa25.29■■□□□ 1.64
AL390728.4-204ENST00000606454 CARMIL2Q6F5E8 1435 aa25.23■■□□□ 1.63
AL390728.4-204ENST00000606454 UGGT2Q9NYU1 1516 aa25.17■■□□□ 1.62
AL390728.4-204ENST00000606454 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
AL390728.4-204ENST00000606454 PTPRGP23470 1445 aa25.14■■□□□ 1.62
AL390728.4-204ENST00000606454 CTTNBP2Q8WZ74 1663 aa25.13■■□□□ 1.61
AL390728.4-204ENST00000606454 DISP1Q96F81 1524 aa25.13■■□□□ 1.61
AL390728.4-204ENST00000606454 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
AL390728.4-204ENST00000606454 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
AL390728.4-204ENST00000606454 KIF21BO75037 1637 aa25.07■■□□□ 1.6
AL390728.4-204ENST00000606454 GOLGA3Q08378 1498 aa25.06■■□□□ 1.6
AL390728.4-204ENST00000606454 NPM1P06748 294 aaKnown RBP eCLIP25.05■■□□□ 1.6
AL390728.4-204ENST00000606454 KIAA0556O60303 1618 aa25.04■■□□□ 1.6
AL390728.4-204ENST00000606454 EHMT2Q96KQ7 1210 aa24.99■■□□□ 1.59
AL390728.4-204ENST00000606454 ADCY10Q96PN6 1610 aa24.98■■□□□ 1.59
AL390728.4-204ENST00000606454 UBTFP17480 764 aaKnown RBP24.97■■□□□ 1.59
AL390728.4-204ENST00000606454 UACAQ9BZF9 1416 aa24.95■■□□□ 1.59
AL390728.4-204ENST00000606454 RANGAP1P46060 587 aaPredicted RBP24.93■■□□□ 1.58
AL390728.4-204ENST00000606454 P3H3Q8IVL6 736 aa24.93■■□□□ 1.58
AL390728.4-204ENST00000606454 UHRF1BP1LA0JNW5 1464 aa24.91■■□□□ 1.58
AL390728.4-204ENST00000606454 ABCC2Q92887 1545 aa24.89■■□□□ 1.57
AL390728.4-204ENST00000606454 MAPKBP1O60336 1514 aa24.86■■□□□ 1.57
AL390728.4-204ENST00000606454 SAMD9Q5K651 1589 aa24.85■■□□□ 1.57
AL390728.4-204ENST00000606454 PLB1Q6P1J6 1458 aa24.83■■□□□ 1.57
AL390728.4-204ENST00000606454 KDM5BQ9UGL1 1544 aa24.79■■□□□ 1.56
AL390728.4-204ENST00000606454 ABCA8O94911 1581 aa24.78■■□□□ 1.56
AL390728.4-204ENST00000606454 ABCC10Q5T3U5 1492 aa24.77■■□□□ 1.56
AL390728.4-204ENST00000606454 EFCAB5A4FU69 1503 aa24.77■■□□□ 1.56
AL390728.4-204ENST00000606454 FAM69CQ0P6D2 419 aa24.77■■□□□ 1.56
AL390728.4-204ENST00000606454 FHOD3Q2V2M9 1422 aa24.77■■□□□ 1.56
AL390728.4-204ENST00000606454 ASXL2Q76L83 1435 aa24.74■■□□□ 1.55
AL390728.4-204ENST00000606454 ZCCHC11Q5TAX3 1644 aaKnown RBP24.69■■□□□ 1.54
AL390728.4-204ENST00000606454 DIP2BQ9P265 1576 aa24.67■■□□□ 1.54
AL390728.4-204ENST00000606454 KIF13AQ9H1H9 1805 aa24.65■■□□□ 1.54
AL390728.4-204ENST00000606454 ARHGAP35Q9NRY4 1499 aa24.65■■□□□ 1.54
AL390728.4-204ENST00000606454 ARID3CA6NKF2 412 aa24.65■■□□□ 1.54
AL390728.4-204ENST00000606454 RAPGEF6Q8TEU7 1601 aa24.64■■□□□ 1.53
AL390728.4-204ENST00000606454 ATP10BO94823 1461 aa24.62■■□□□ 1.53
AL390728.4-204ENST00000606454 WDR7Q9Y4E6 1490 aa24.6■■□□□ 1.53
AL390728.4-204ENST00000606454 FMN1Q68DA7 1419 aa24.6■■□□□ 1.53
AL390728.4-204ENST00000606454 EPRSP07814 1512 aaKnown RBP24.59■■□□□ 1.53
AL390728.4-204ENST00000606454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.58■■□□□ 1.53
AL390728.4-204ENST00000606454 HNRNPUL2Q1KMD3 747 aaKnown RBP24.58■■□□□ 1.53
AL390728.4-204ENST00000606454 NUP153P49790 1475 aaKnown RBP24.58■■□□□ 1.52
AL390728.4-204ENST00000606454 GLI2P10070 1586 aa24.56■■□□□ 1.52
AL390728.4-204ENST00000606454 KCNH8Q96L42 1107 aa24.55■■□□□ 1.52
AL390728.4-204ENST00000606454 CLIP1P30622 1438 aa24.52■■□□□ 1.52
AL390728.4-204ENST00000606454 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
AL390728.4-204ENST00000606454 LOC105371045A0A1W2PR82 267 aa24.48■■□□□ 1.51
AL390728.4-204ENST00000606454 PLEKHD1A6NEE1 506 aa24.46■■□□□ 1.51
AL390728.4-204ENST00000606454 TSPOAP1O95153 1857 aa24.42■■□□□ 1.5
AL390728.4-204ENST00000606454 HECW1Q76N89 1606 aa24.42■■□□□ 1.5
AL390728.4-204ENST00000606454 MAP3K4Q9Y6R4 1608 aa24.42■■□□□ 1.5
AL390728.4-204ENST00000606454 CD109Q6YHK3 1445 aa24.41■■□□□ 1.5
AL390728.4-204ENST00000606454 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
AL390728.4-204ENST00000606454 CDK13Q14004 1512 aaKnown RBP24.39■■□□□ 1.49
AL390728.4-204ENST00000606454 CASKIN1Q8WXD9 1431 aa24.38■■□□□ 1.49
AL390728.4-204ENST00000606454 TEX14Q8IWB6 1497 aa24.38■■□□□ 1.49
AL390728.4-204ENST00000606454 CDK11AQ9UQ88 783 aaPredicted RBP24.37■■□□□ 1.49
AL390728.4-204ENST00000606454 PPRC1Q5VV67 1664 aaKnown RBP24.35■■□□□ 1.49
AL390728.4-204ENST00000606454 CFAP43Q8NDM7 1665 aa24.34■■□□□ 1.49
AL390728.4-204ENST00000606454 MAGI3Q5TCQ9 1506 aa24.34■■□□□ 1.49
AL390728.4-204ENST00000606454 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
AL390728.4-204ENST00000606454 KDM6BO15054 1643 aa24.31■■□□□ 1.48
AL390728.4-204ENST00000606454 FYCO1Q9BQS8 1478 aa24.31■■□□□ 1.48
AL390728.4-204ENST00000606454 ABCA9Q8IUA7 1624 aa24.3■■□□□ 1.48
AL390728.4-204ENST00000606454 CCDC18Q5T9S5 1454 aa24.28■■□□□ 1.48
AL390728.4-204ENST00000606454 TROQ12816 1431 aaPredicted RBP24.23■■□□□ 1.47
AL390728.4-204ENST00000606454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.21■■□□□ 1.47
AL390728.4-204ENST00000606454 COL17A1Q9UMD9 1497 aaPredicted RBP24.21■■□□□ 1.47
AL390728.4-204ENST00000606454 LRRIQ1Q96JM4 1722 aa24.21■■□□□ 1.47
AL390728.4-204ENST00000606454 PHLDB1Q86UU1 1377 aa24.19■■□□□ 1.46
AL390728.4-204ENST00000606454 NEO1Q92859 1461 aa24.15■■□□□ 1.46
AL390728.4-204ENST00000606454 TTC37Q6PGP7 1564 aa24.15■■□□□ 1.46
AL390728.4-204ENST00000606454 KIF14Q15058 1648 aa24.13■■□□□ 1.45
AL390728.4-204ENST00000606454 PLCH2O75038 1416 aa24.12■■□□□ 1.45
AL390728.4-204ENST00000606454 ARAP3Q8WWN8 1544 aa24.12■■□□□ 1.45
AL390728.4-204ENST00000606454 VPS8Q8N3P4 1428 aa24.11■■□□□ 1.45
AL390728.4-204ENST00000606454 FANCAO15360 1455 aa24.11■■□□□ 1.45
AL390728.4-204ENST00000606454 AKNAQ7Z591 1439 aa24.07■■□□□ 1.44
AL390728.4-204ENST00000606454 MTUS2Q5JR59 1369 aa24.06■■□□□ 1.44
AL390728.4-204ENST00000606454 EFCAB2Q5VUJ9 269 aa24.06■■□□□ 1.44
AL390728.4-204ENST00000606454 RAPGEF3O95398 923 aa24.04■■□□□ 1.44
AL390728.4-204ENST00000606454 CFAP74Q9C0B2 1584 aa24.03■■□□□ 1.44
AL390728.4-204ENST00000606454 MYO5CQ9NQX4 1742 aa24.01■■□□□ 1.43
AL390728.4-204ENST00000606454 DENND4BO75064 1496 aaPredicted RBP24■■□□□ 1.43
AL390728.4-204ENST00000606454 ARHGAP5Q13017 1502 aa23.99■■□□□ 1.43
AL390728.4-204ENST00000606454 ADGRL1O94910 1474 aa23.97■■□□□ 1.43
AL390728.4-204ENST00000606454 EHBP1L1Q8N3D4 1523 aa23.95■■□□□ 1.43
AL390728.4-204ENST00000606454 SCAPERQ9BY12 1400 aa23.95■■□□□ 1.42
AL390728.4-204ENST00000606454 TIAM1Q13009 1591 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms