RNA–Protein interactions for RNA: ENST00000604419.1

SRGAP2-210, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-210ENST00000604419 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
SRGAP2-210ENST00000604419 IGF1RP08069 1367 aa17■□□□□ 0.31
SRGAP2-210ENST00000604419 KIF27Q86VH2 1401 aa16.98■□□□□ 0.31
SRGAP2-210ENST00000604419 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
SRGAP2-210ENST00000604419 KIAA0586Q9BVV6 1533 aa16.97■□□□□ 0.31
SRGAP2-210ENST00000604419 FAM69CQ0P6D2 419 aa16.95■□□□□ 0.3
SRGAP2-210ENST00000604419 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
SRGAP2-210ENST00000604419 KIF13AQ9H1H9 1805 aa16.91■□□□□ 0.3
SRGAP2-210ENST00000604419 CUL7Q14999 1698 aa16.91■□□□□ 0.3
SRGAP2-210ENST00000604419 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
SRGAP2-210ENST00000604419 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
SRGAP2-210ENST00000604419 PTPRGP23470 1445 aa16.86■□□□□ 0.29
SRGAP2-210ENST00000604419 ADCY10Q96PN6 1610 aa16.85■□□□□ 0.29
SRGAP2-210ENST00000604419 CARMIL2Q6F5E8 1435 aa16.84■□□□□ 0.29
SRGAP2-210ENST00000604419 DIP2BQ9P265 1576 aa16.81■□□□□ 0.28
SRGAP2-210ENST00000604419 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
SRGAP2-210ENST00000604419 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
SRGAP2-210ENST00000604419 ABCC2Q92887 1545 aa16.74■□□□□ 0.27
SRGAP2-210ENST00000604419 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
SRGAP2-210ENST00000604419 PLB1Q6P1J6 1458 aa16.72■□□□□ 0.27
SRGAP2-210ENST00000604419 KDM6BO15054 1643 aa16.71■□□□□ 0.27
SRGAP2-210ENST00000604419 UHRF1BP1LA0JNW5 1464 aa16.71■□□□□ 0.27
SRGAP2-210ENST00000604419 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
SRGAP2-210ENST00000604419 RAPGEF2Q9Y4G8 1499 aa16.69■□□□□ 0.26
SRGAP2-210ENST00000604419 ASXL2Q76L83 1435 aa16.69■□□□□ 0.26
SRGAP2-210ENST00000604419 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
SRGAP2-210ENST00000604419 TSPOAP1O95153 1857 aa16.66■□□□□ 0.26
SRGAP2-210ENST00000604419 GLI2P10070 1586 aa16.66■□□□□ 0.26
SRGAP2-210ENST00000604419 KDM4FA0A1W2PPD8 638 aa16.65■□□□□ 0.26
SRGAP2-210ENST00000604419 UGGT2Q9NYU1 1516 aa16.65■□□□□ 0.26
SRGAP2-210ENST00000604419 KDM5BQ9UGL1 1544 aa16.63■□□□□ 0.25
SRGAP2-210ENST00000604419 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
SRGAP2-210ENST00000604419 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
SRGAP2-210ENST00000604419 TEX14Q8IWB6 1497 aa16.56■□□□□ 0.24
SRGAP2-210ENST00000604419 KIAA0556O60303 1618 aa16.56■□□□□ 0.24
SRGAP2-210ENST00000604419 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
SRGAP2-210ENST00000604419 FAM9AQ8IZU1 332 aaPredicted RBP16.55■□□□□ 0.24
SRGAP2-210ENST00000604419 PPRC1Q5VV67 1664 aaKnown RBP16.54■□□□□ 0.24
SRGAP2-210ENST00000604419 ZCCHC11Q5TAX3 1644 aaKnown RBP16.52■□□□□ 0.24
SRGAP2-210ENST00000604419 MAP3K4Q9Y6R4 1608 aa16.52■□□□□ 0.23
SRGAP2-210ENST00000604419 COL17A1Q9UMD9 1497 aaPredicted RBP16.5■□□□□ 0.23
SRGAP2-210ENST00000604419 WDR7Q9Y4E6 1490 aa16.5■□□□□ 0.23
SRGAP2-210ENST00000604419 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
SRGAP2-210ENST00000604419 CTTNBP2Q8WZ74 1663 aa16.47■□□□□ 0.23
SRGAP2-210ENST00000604419 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
SRGAP2-210ENST00000604419 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
SRGAP2-210ENST00000604419 ABCA8O94911 1581 aa16.44■□□□□ 0.22
SRGAP2-210ENST00000604419 ADGRL1O94910 1474 aa16.44■□□□□ 0.22
SRGAP2-210ENST00000604419 MAGI3Q5TCQ9 1506 aa16.44■□□□□ 0.22
SRGAP2-210ENST00000604419 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
SRGAP2-210ENST00000604419 CFAP43Q8NDM7 1665 aa16.39■□□□□ 0.21
SRGAP2-210ENST00000604419 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
SRGAP2-210ENST00000604419 PHLDB1Q86UU1 1377 aa16.35■□□□□ 0.21
SRGAP2-210ENST00000604419 ATP10BO94823 1461 aa16.35■□□□□ 0.21
SRGAP2-210ENST00000604419 ARAP3Q8WWN8 1544 aa16.31■□□□□ 0.2
SRGAP2-210ENST00000604419 ARID3CA6NKF2 412 aa16.31■□□□□ 0.2
SRGAP2-210ENST00000604419 EEA1Q15075 1411 aa16.28■□□□□ 0.2
SRGAP2-210ENST00000604419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.28■□□□□ 0.2
SRGAP2-210ENST00000604419 HNRNPUL2Q1KMD3 747 aaKnown RBP16.28■□□□□ 0.2
SRGAP2-210ENST00000604419 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
SRGAP2-210ENST00000604419 ILDR1Q86SU0 546 aaPredicted RBP16.26■□□□□ 0.19
SRGAP2-210ENST00000604419 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
SRGAP2-210ENST00000604419 ABCA9Q8IUA7 1624 aa16.25■□□□□ 0.19
SRGAP2-210ENST00000604419 RAPGEF6Q8TEU7 1601 aa16.23■□□□□ 0.19
SRGAP2-210ENST00000604419 NEO1Q92859 1461 aa16.23■□□□□ 0.19
SRGAP2-210ENST00000604419 HECW2Q9P2P5 1572 aa16.23■□□□□ 0.19
SRGAP2-210ENST00000604419 PLEKHD1A6NEE1 506 aa16.23■□□□□ 0.19
SRGAP2-210ENST00000604419 RAPGEF3O95398 923 aa16.21■□□□□ 0.19
SRGAP2-210ENST00000604419 NUP153P49790 1475 aaKnown RBP16.19■□□□□ 0.18
SRGAP2-210ENST00000604419 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
SRGAP2-210ENST00000604419 KIF21BO75037 1637 aa16.17■□□□□ 0.18
SRGAP2-210ENST00000604419 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
SRGAP2-210ENST00000604419 ARID4BQ4LE39 1312 aaPredicted RBP16.14■□□□□ 0.17
SRGAP2-210ENST00000604419 EFCAB5A4FU69 1503 aa16.12■□□□□ 0.17
SRGAP2-210ENST00000604419 DENND4BO75064 1496 aaPredicted RBP16.11■□□□□ 0.17
SRGAP2-210ENST00000604419 PTPRMP28827 1452 aa16.11■□□□□ 0.17
SRGAP2-210ENST00000604419 AKNAQ7Z591 1439 aa16.11■□□□□ 0.17
SRGAP2-210ENST00000604419 ADAMTSL3P82987 1691 aa16.1■□□□□ 0.17
SRGAP2-210ENST00000604419 FANCAO15360 1455 aa16.09■□□□□ 0.17
SRGAP2-210ENST00000604419 FRMPD1Q5SYB0 1578 aa16.07■□□□□ 0.16
SRGAP2-210ENST00000604419 CFAP74Q9C0B2 1584 aa16.06■□□□□ 0.16
SRGAP2-210ENST00000604419 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
SRGAP2-210ENST00000604419 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.05■□□□□ 0.16
SRGAP2-210ENST00000604419 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
SRGAP2-210ENST00000604419 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
SRGAP2-210ENST00000604419 POGZQ7Z3K3 1410 aa16.04■□□□□ 0.16
SRGAP2-210ENST00000604419 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
SRGAP2-210ENST00000604419 FMN1Q68DA7 1419 aa16.02■□□□□ 0.16
SRGAP2-210ENST00000604419 ATP1B4Q9UN42 357 aaPredicted RBP16.02■□□□□ 0.16
SRGAP2-210ENST00000604419 ARHGEF40Q8TER5 1519 aa16.02■□□□□ 0.15
SRGAP2-210ENST00000604419 RICTORQ6R327 1708 aa16.02■□□□□ 0.15
SRGAP2-210ENST00000604419 PLCH2O75038 1416 aa16.02■□□□□ 0.15
SRGAP2-210ENST00000604419 EFCAB2Q5VUJ9 269 aa16.01■□□□□ 0.15
SRGAP2-210ENST00000604419 FBXO41Q8TF61 875 aa16.01■□□□□ 0.15
SRGAP2-210ENST00000604419 MADDQ8WXG6 1647 aa16■□□□□ 0.15
SRGAP2-210ENST00000604419 ZMYM4Q5VZL5 1548 aa15.99■□□□□ 0.15
SRGAP2-210ENST00000604419 SCAPERQ9BY12 1400 aa15.99■□□□□ 0.15
SRGAP2-210ENST00000604419 TTC37Q6PGP7 1564 aa15.99■□□□□ 0.15
SRGAP2-210ENST00000604419 CDK13Q14004 1512 aaKnown RBP15.99■□□□□ 0.15
SRGAP2-210ENST00000604419 PCF11O94913 1555 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms