RNA–Protein interactions for RNA: ENST00000604278.1

AL049829.3-202, humanhuman

BASIC

Gene AL049829.3, Length 711 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049829.3-202ENST00000604278 SHROOM2Q13796 1616 aa16■□□□□ 0.15
AL049829.3-202ENST00000604278 CCDC88BA6NC98 1476 aa15.98■□□□□ 0.15
AL049829.3-202ENST00000604278 FGD5Q6ZNL6 1462 aa15.94■□□□□ 0.14
AL049829.3-202ENST00000604278 TSPOAP1O95153 1857 aa15.91■□□□□ 0.14
AL049829.3-202ENST00000604278 NUP160Q12769 1436 aa15.91■□□□□ 0.14
AL049829.3-202ENST00000604278 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
AL049829.3-202ENST00000604278 NPM1P06748 294 aaKnown RBP eCLIP15.84■□□□□ 0.13
AL049829.3-202ENST00000604278 ILDR2Q71H61 639 aa15.84■□□□□ 0.13
AL049829.3-202ENST00000604278 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
AL049829.3-202ENST00000604278 ADCY10Q96PN6 1610 aa15.8■□□□□ 0.12
AL049829.3-202ENST00000604278 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
AL049829.3-202ENST00000604278 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
AL049829.3-202ENST00000604278 CUX1P39880 1505 aa15.78■□□□□ 0.12
AL049829.3-202ENST00000604278 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
AL049829.3-202ENST00000604278 DISP3Q9P2K9 1392 aa15.75■□□□□ 0.11
AL049829.3-202ENST00000604278 PPRC1Q5VV67 1664 aaKnown RBP15.75■□□□□ 0.11
AL049829.3-202ENST00000604278 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
AL049829.3-202ENST00000604278 MSH5O43196 834 aa15.74■□□□□ 0.11
AL049829.3-202ENST00000604278 GLI2P10070 1586 aa15.66■□□□□ 0.1
AL049829.3-202ENST00000604278 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
AL049829.3-202ENST00000604278 COL17A1Q9UMD9 1497 aaPredicted RBP15.65■□□□□ 0.1
AL049829.3-202ENST00000604278 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
AL049829.3-202ENST00000604278 SPATA31D1Q6ZQQ2 1576 aa15.62■□□□□ 0.09
AL049829.3-202ENST00000604278 RUSC2Q8N2Y8 1516 aa15.6■□□□□ 0.09
AL049829.3-202ENST00000604278 TEX14Q8IWB6 1497 aa15.57■□□□□ 0.08
AL049829.3-202ENST00000604278 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
AL049829.3-202ENST00000604278 MAP3K4Q9Y6R4 1608 aa15.56■□□□□ 0.08
AL049829.3-202ENST00000604278 ERICH3Q5RHP9 1530 aa15.55■□□□□ 0.08
AL049829.3-202ENST00000604278 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
AL049829.3-202ENST00000604278 ASXL2Q76L83 1435 aa15.52■□□□□ 0.08
AL049829.3-202ENST00000604278 ABCC2Q92887 1545 aa15.51■□□□□ 0.07
AL049829.3-202ENST00000604278 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
AL049829.3-202ENST00000604278 PTPRMP28827 1452 aa15.48■□□□□ 0.07
AL049829.3-202ENST00000604278 KIAA0586Q9BVV6 1533 aa15.47■□□□□ 0.07
AL049829.3-202ENST00000604278 KIF21BO75037 1637 aa15.46■□□□□ 0.07
AL049829.3-202ENST00000604278 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
AL049829.3-202ENST00000604278 ADAMTSL3P82987 1691 aa15.44■□□□□ 0.06
AL049829.3-202ENST00000604278 EPRSP07814 1512 aaKnown RBP15.43■□□□□ 0.06
AL049829.3-202ENST00000604278 CUL7Q14999 1698 aa15.43■□□□□ 0.06
AL049829.3-202ENST00000604278 PTPRGP23470 1445 aa15.38■□□□□ 0.05
AL049829.3-202ENST00000604278 UHRF1BP1LA0JNW5 1464 aa15.38■□□□□ 0.05
AL049829.3-202ENST00000604278 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
AL049829.3-202ENST00000604278 MAGI3Q5TCQ9 1506 aa15.31■□□□□ 0.04
AL049829.3-202ENST00000604278 KDM5BQ9UGL1 1544 aa15.31■□□□□ 0.04
AL049829.3-202ENST00000604278 BIVM-ERCC5R4GMW8 1640 aa15.3■□□□□ 0.04
AL049829.3-202ENST00000604278 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
AL049829.3-202ENST00000604278 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
AL049829.3-202ENST00000604278 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
AL049829.3-202ENST00000604278 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
AL049829.3-202ENST00000604278 ZCCHC11Q5TAX3 1644 aaKnown RBP15.26■□□□□ 0.03
AL049829.3-202ENST00000604278 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
AL049829.3-202ENST00000604278 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
AL049829.3-202ENST00000604278 WDR7Q9Y4E6 1490 aa15.23■□□□□ 0.03
AL049829.3-202ENST00000604278 HSPA2P54652 639 aa15.23■□□□□ 0.03
AL049829.3-202ENST00000604278 ARAP3Q8WWN8 1544 aa15.22■□□□□ 0.03
AL049829.3-202ENST00000604278 CD109Q6YHK3 1445 aa15.2■□□□□ 0.02
AL049829.3-202ENST00000604278 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
AL049829.3-202ENST00000604278 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
AL049829.3-202ENST00000604278 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
AL049829.3-202ENST00000604278 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
AL049829.3-202ENST00000604278 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
AL049829.3-202ENST00000604278 IQGAP2Q13576 1575 aa15.09■□□□□ 0.01
AL049829.3-202ENST00000604278 PHLDB1Q86UU1 1377 aa15.09■□□□□ 0.01
AL049829.3-202ENST00000604278 STRCQ7RTU9 1775 aa15.08■□□□□ 0
AL049829.3-202ENST00000604278 DISP1Q96F81 1524 aa15.07■□□□□ 0
AL049829.3-202ENST00000604278 ARID4BQ4LE39 1312 aaPredicted RBP15.06■□□□□ 0
AL049829.3-202ENST00000604278 PREX1Q8TCU6 1659 aa15.06■□□□□ 0
AL049829.3-202ENST00000604278 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
AL049829.3-202ENST00000604278 LTBP4Q8N2S1 1624 aa15.03■□□□□ -0
AL049829.3-202ENST00000604278 FRMPD1Q5SYB0 1578 aa15.02□□□□□ -0.01
AL049829.3-202ENST00000604278 TTC37Q6PGP7 1564 aa15.02□□□□□ -0.01
AL049829.3-202ENST00000604278 MED1Q15648 1581 aaPredicted RBP15.01□□□□□ -0.01
AL049829.3-202ENST00000604278 IGF1RP08069 1367 aa15□□□□□ -0.01
AL049829.3-202ENST00000604278 PTPRTO14522 1441 aa14.99□□□□□ -0.01
AL049829.3-202ENST00000604278 POGZQ7Z3K3 1410 aa14.99□□□□□ -0.01
AL049829.3-202ENST00000604278 FANCAO15360 1455 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 NEO1Q92859 1461 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 FER1L4A9Z1Z3 1794 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
AL049829.3-202ENST00000604278 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
AL049829.3-202ENST00000604278 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
AL049829.3-202ENST00000604278 ABCA9Q8IUA7 1624 aa14.94□□□□□ -0.02
AL049829.3-202ENST00000604278 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
AL049829.3-202ENST00000604278 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
AL049829.3-202ENST00000604278 ABCA8O94911 1581 aa14.89□□□□□ -0.03
AL049829.3-202ENST00000604278 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
AL049829.3-202ENST00000604278 SIGLEC1Q9BZZ2 1709 aa14.89□□□□□ -0.03
AL049829.3-202ENST00000604278 ADRA2BP18089 450 aa14.88□□□□□ -0.03
AL049829.3-202ENST00000604278 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
AL049829.3-202ENST00000604278 UHRF1BP1Q6BDS2 1440 aa14.87□□□□□ -0.03
AL049829.3-202ENST00000604278 AKNAQ7Z591 1439 aa14.87□□□□□ -0.03
AL049829.3-202ENST00000604278 ZMYM4Q5VZL5 1548 aa14.85□□□□□ -0.03
AL049829.3-202ENST00000604278 SETD1BQ9UPS6 1966 aaKnown RBP14.85□□□□□ -0.03
AL049829.3-202ENST00000604278 ARHGEF12Q9NZN5 1544 aa14.84□□□□□ -0.03
AL049829.3-202ENST00000604278 EFCAB5A4FU69 1503 aa14.83□□□□□ -0.04
AL049829.3-202ENST00000604278 UBAP1LF5GYI3 381 aa14.83□□□□□ -0.04
AL049829.3-202ENST00000604278 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.04
AL049829.3-202ENST00000604278 DENND4BO75064 1496 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms