RNA–Protein interactions for RNA: ENST00000604278.1

AL049829.3-202, humanhuman

BASIC

Gene AL049829.3, Length 711 nt, Biotype transcribed unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049829.3-202ENST00000604278 SHROOM2Q13796 1616 aa16■□□□□ 0.15
AL049829.3-202ENST00000604278 CCDC88BA6NC98 1476 aa15.98■□□□□ 0.15
AL049829.3-202ENST00000604278 FGD5Q6ZNL6 1462 aa15.94■□□□□ 0.14
AL049829.3-202ENST00000604278 TSPOAP1O95153 1857 aa15.91■□□□□ 0.14
AL049829.3-202ENST00000604278 NUP160Q12769 1436 aa15.91■□□□□ 0.14
AL049829.3-202ENST00000604278 GRIN2AQ12879 1464 aa15.91■□□□□ 0.14
AL049829.3-202ENST00000604278 NPM1P06748 294 aaKnown RBP eCLIP15.84■□□□□ 0.13
AL049829.3-202ENST00000604278 ILDR2Q71H61 639 aa15.84■□□□□ 0.13
AL049829.3-202ENST00000604278 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.13
AL049829.3-202ENST00000604278 ADCY10Q96PN6 1610 aa15.8■□□□□ 0.12
AL049829.3-202ENST00000604278 ADAMTS12P58397 1594 aa15.79■□□□□ 0.12
AL049829.3-202ENST00000604278 TOP2BQ02880 1626 aa15.78■□□□□ 0.12
AL049829.3-202ENST00000604278 CUX1P39880 1505 aa15.78■□□□□ 0.12
AL049829.3-202ENST00000604278 PRG4Q92954 1404 aaPredicted RBP15.77■□□□□ 0.12
AL049829.3-202ENST00000604278 DISP3Q9P2K9 1392 aa15.75■□□□□ 0.11
AL049829.3-202ENST00000604278 PPRC1Q5VV67 1664 aaKnown RBP15.75■□□□□ 0.11
AL049829.3-202ENST00000604278 ABCA10Q8WWZ4 1543 aa15.74■□□□□ 0.11
AL049829.3-202ENST00000604278 MSH5O43196 834 aa15.74■□□□□ 0.11
AL049829.3-202ENST00000604278 GLI2P10070 1586 aa15.66■□□□□ 0.1
AL049829.3-202ENST00000604278 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
AL049829.3-202ENST00000604278 COL17A1Q9UMD9 1497 aaPredicted RBP15.65■□□□□ 0.1
AL049829.3-202ENST00000604278 JPH4Q96JJ6 628 aa15.65■□□□□ 0.1
AL049829.3-202ENST00000604278 SPATA31D1Q6ZQQ2 1576 aa15.62■□□□□ 0.09
AL049829.3-202ENST00000604278 RUSC2Q8N2Y8 1516 aa15.6■□□□□ 0.09
AL049829.3-202ENST00000604278 TEX14Q8IWB6 1497 aa15.57■□□□□ 0.08
AL049829.3-202ENST00000604278 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
AL049829.3-202ENST00000604278 MAP3K4Q9Y6R4 1608 aa15.56■□□□□ 0.08
AL049829.3-202ENST00000604278 ERICH3Q5RHP9 1530 aa15.55■□□□□ 0.08
AL049829.3-202ENST00000604278 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
AL049829.3-202ENST00000604278 ASXL2Q76L83 1435 aa15.52■□□□□ 0.08
AL049829.3-202ENST00000604278 ABCC2Q92887 1545 aa15.51■□□□□ 0.07
AL049829.3-202ENST00000604278 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
AL049829.3-202ENST00000604278 PTPRMP28827 1452 aa15.48■□□□□ 0.07
AL049829.3-202ENST00000604278 KIAA0586Q9BVV6 1533 aa15.47■□□□□ 0.07
AL049829.3-202ENST00000604278 KIF21BO75037 1637 aa15.46■□□□□ 0.07
AL049829.3-202ENST00000604278 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
AL049829.3-202ENST00000604278 ADAMTSL3P82987 1691 aa15.44■□□□□ 0.06
AL049829.3-202ENST00000604278 EPRSP07814 1512 aaKnown RBP15.43■□□□□ 0.06
AL049829.3-202ENST00000604278 CUL7Q14999 1698 aa15.43■□□□□ 0.06
AL049829.3-202ENST00000604278 PTPRGP23470 1445 aa15.38■□□□□ 0.05
AL049829.3-202ENST00000604278 UHRF1BP1LA0JNW5 1464 aa15.38■□□□□ 0.05
AL049829.3-202ENST00000604278 PIAS4Q8N2W9 510 aaPredicted RBP15.33■□□□□ 0.04
AL049829.3-202ENST00000604278 MAGI3Q5TCQ9 1506 aa15.31■□□□□ 0.04
AL049829.3-202ENST00000604278 KDM5BQ9UGL1 1544 aa15.31■□□□□ 0.04
AL049829.3-202ENST00000604278 BIVM-ERCC5R4GMW8 1640 aa15.3■□□□□ 0.04
AL049829.3-202ENST00000604278 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
AL049829.3-202ENST00000604278 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
AL049829.3-202ENST00000604278 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
AL049829.3-202ENST00000604278 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
AL049829.3-202ENST00000604278 ZCCHC11Q5TAX3 1644 aaKnown RBP15.26■□□□□ 0.03
AL049829.3-202ENST00000604278 UACAQ9BZF9 1416 aa15.26■□□□□ 0.03
AL049829.3-202ENST00000604278 CARMIL2Q6F5E8 1435 aa15.25■□□□□ 0.03
AL049829.3-202ENST00000604278 WDR7Q9Y4E6 1490 aa15.23■□□□□ 0.03
AL049829.3-202ENST00000604278 HSPA2P54652 639 aa15.23■□□□□ 0.03
AL049829.3-202ENST00000604278 ARAP3Q8WWN8 1544 aa15.22■□□□□ 0.03
AL049829.3-202ENST00000604278 CD109Q6YHK3 1445 aa15.2■□□□□ 0.02
AL049829.3-202ENST00000604278 RIMS1Q86UR5 1692 aaKnown RBP15.19■□□□□ 0.02
AL049829.3-202ENST00000604278 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
AL049829.3-202ENST00000604278 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
AL049829.3-202ENST00000604278 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
AL049829.3-202ENST00000604278 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
AL049829.3-202ENST00000604278 IQGAP2Q13576 1575 aa15.09■□□□□ 0.01
AL049829.3-202ENST00000604278 PHLDB1Q86UU1 1377 aa15.09■□□□□ 0.01
AL049829.3-202ENST00000604278 STRCQ7RTU9 1775 aa15.08■□□□□ 0
AL049829.3-202ENST00000604278 DISP1Q96F81 1524 aa15.07■□□□□ 0
AL049829.3-202ENST00000604278 ARID4BQ4LE39 1312 aaPredicted RBP15.06■□□□□ 0
AL049829.3-202ENST00000604278 PREX1Q8TCU6 1659 aa15.06■□□□□ 0
AL049829.3-202ENST00000604278 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
AL049829.3-202ENST00000604278 LTBP4Q8N2S1 1624 aa15.03■□□□□ -0
AL049829.3-202ENST00000604278 FRMPD1Q5SYB0 1578 aa15.02□□□□□ -0.01
AL049829.3-202ENST00000604278 TTC37Q6PGP7 1564 aa15.02□□□□□ -0.01
AL049829.3-202ENST00000604278 MED1Q15648 1581 aaPredicted RBP15.01□□□□□ -0.01
AL049829.3-202ENST00000604278 IGF1RP08069 1367 aa15□□□□□ -0.01
AL049829.3-202ENST00000604278 PTPRTO14522 1441 aa14.99□□□□□ -0.01
AL049829.3-202ENST00000604278 POGZQ7Z3K3 1410 aa14.99□□□□□ -0.01
AL049829.3-202ENST00000604278 FANCAO15360 1455 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 NEO1Q92859 1461 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 FER1L4A9Z1Z3 1794 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 UGGT2Q9NYU1 1516 aa14.97□□□□□ -0.01
AL049829.3-202ENST00000604278 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
AL049829.3-202ENST00000604278 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
AL049829.3-202ENST00000604278 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
AL049829.3-202ENST00000604278 ABCA9Q8IUA7 1624 aa14.94□□□□□ -0.02
AL049829.3-202ENST00000604278 PLPPR3Q6T4P5 718 aa14.92□□□□□ -0.02
AL049829.3-202ENST00000604278 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
AL049829.3-202ENST00000604278 ABCA8O94911 1581 aa14.89□□□□□ -0.03
AL049829.3-202ENST00000604278 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
AL049829.3-202ENST00000604278 SIGLEC1Q9BZZ2 1709 aa14.89□□□□□ -0.03
AL049829.3-202ENST00000604278 ADRA2BP18089 450 aa14.88□□□□□ -0.03
AL049829.3-202ENST00000604278 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
AL049829.3-202ENST00000604278 UHRF1BP1Q6BDS2 1440 aa14.87□□□□□ -0.03
AL049829.3-202ENST00000604278 AKNAQ7Z591 1439 aa14.87□□□□□ -0.03
AL049829.3-202ENST00000604278 ZMYM4Q5VZL5 1548 aa14.85□□□□□ -0.03
AL049829.3-202ENST00000604278 SETD1BQ9UPS6 1966 aaKnown RBP14.85□□□□□ -0.03
AL049829.3-202ENST00000604278 ARHGEF12Q9NZN5 1544 aa14.84□□□□□ -0.03
AL049829.3-202ENST00000604278 EFCAB5A4FU69 1503 aa14.83□□□□□ -0.04
AL049829.3-202ENST00000604278 UBAP1LF5GYI3 381 aa14.83□□□□□ -0.04
AL049829.3-202ENST00000604278 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.04
AL049829.3-202ENST00000604278 DENND4BO75064 1496 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms