RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 JPH4Q96JJ6 628 aa40.32■■■■■ 4.05
SSX2IP-209ENST00000603677 PRG4Q92954 1404 aaPredicted RBP40.21■■■■■ 4.03
SSX2IP-209ENST00000603677 ERCC6L2Q5T890 1561 aa40.18■■■■■ 4.02
SSX2IP-209ENST00000603677 RAPGEF2Q9Y4G8 1499 aa40.17■■■■■ 4.02
SSX2IP-209ENST00000603677 IQGAP2Q13576 1575 aa39.98■■■■□ 3.99
SSX2IP-209ENST00000603677 EEA1Q15075 1411 aa39.97■■■■□ 3.99
SSX2IP-209ENST00000603677 PRXQ9BXM0 1461 aa39.95■■■■□ 3.99
SSX2IP-209ENST00000603677 CARMIL2Q6F5E8 1435 aa39.92■■■■□ 3.98
SSX2IP-209ENST00000603677 CSRNP3Q8WYN3 585 aa39.84■■■■□ 3.97
SSX2IP-209ENST00000603677 TRHP20396 242 aaPredicted RBP39.83■■■■□ 3.97
SSX2IP-209ENST00000603677 UGGT2Q9NYU1 1516 aa39.81■■■■□ 3.96
SSX2IP-209ENST00000603677 TNIKQ9UKE5 1360 aa39.78■■■■□ 3.96
SSX2IP-209ENST00000603677 CTTNBP2Q8WZ74 1663 aa39.76■■■■□ 3.96
SSX2IP-209ENST00000603677 PTPRGP23470 1445 aa39.74■■■■□ 3.95
SSX2IP-209ENST00000603677 CHIC1Q5VXU3 224 aa39.71■■■■□ 3.95
SSX2IP-209ENST00000603677 NPM1P06748 294 aaKnown RBP eCLIP39.69■■■■□ 3.94
SSX2IP-209ENST00000603677 DISP1Q96F81 1524 aa39.69■■■■□ 3.94
SSX2IP-209ENST00000603677 GOLGA3Q08378 1498 aa39.63■■■■□ 3.94
SSX2IP-209ENST00000603677 ADCY10Q96PN6 1610 aa39.61■■■■□ 3.93
SSX2IP-209ENST00000603677 KIAA0556O60303 1618 aa39.58■■■■□ 3.93
SSX2IP-209ENST00000603677 MAPKBP1O60336 1514 aa39.56■■■■□ 3.92
SSX2IP-209ENST00000603677 UHRF1BP1LA0JNW5 1464 aa39.53■■■■□ 3.92
SSX2IP-209ENST00000603677 UACAQ9BZF9 1416 aa39.48■■■■□ 3.91
SSX2IP-209ENST00000603677 KIF21BO75037 1637 aa39.45■■■■□ 3.91
SSX2IP-209ENST00000603677 ABCC2Q92887 1545 aa39.45■■■■□ 3.91
SSX2IP-209ENST00000603677 FAM9AQ8IZU1 332 aaPredicted RBP39.39■■■■□ 3.9
SSX2IP-209ENST00000603677 ABCC10Q5T3U5 1492 aa39.38■■■■□ 3.9
SSX2IP-209ENST00000603677 TTBK1Q5TCY1 1321 aaPredicted RBP39.37■■■■□ 3.89
SSX2IP-209ENST00000603677 KIF13AQ9H1H9 1805 aa39.33■■■■□ 3.89
SSX2IP-209ENST00000603677 KDM5BQ9UGL1 1544 aa39.3■■■■□ 3.88
SSX2IP-209ENST00000603677 PLB1Q6P1J6 1458 aa39.26■■■■□ 3.88
SSX2IP-209ENST00000603677 SAMD9Q5K651 1589 aa39.25■■■■□ 3.87
SSX2IP-209ENST00000603677 DIP2BQ9P265 1576 aa39.24■■■■□ 3.87
SSX2IP-209ENST00000603677 FAM69CQ0P6D2 419 aa39.23■■■■□ 3.87
SSX2IP-209ENST00000603677 ABCA8O94911 1581 aa39.2■■■■□ 3.87
SSX2IP-209ENST00000603677 ASXL2Q76L83 1435 aa39.16■■■■□ 3.86
SSX2IP-209ENST00000603677 ZCCHC11Q5TAX3 1644 aaKnown RBP39.11■■■■□ 3.85
SSX2IP-209ENST00000603677 EFCAB5A4FU69 1503 aa39.1■■■■□ 3.85
SSX2IP-209ENST00000603677 GLI2P10070 1586 aa39.08■■■■□ 3.85
SSX2IP-209ENST00000603677 UBTFP17480 764 aaKnown RBP39.04■■■■□ 3.84
SSX2IP-209ENST00000603677 P3H3Q8IVL6 736 aa39.03■■■■□ 3.84
SSX2IP-209ENST00000603677 WDR7Q9Y4E6 1490 aa38.96■■■■□ 3.83
SSX2IP-209ENST00000603677 EPRSP07814 1512 aaKnown RBP38.95■■■■□ 3.83
SSX2IP-209ENST00000603677 RAPGEF6Q8TEU7 1601 aa38.92■■■■□ 3.82
SSX2IP-209ENST00000603677 FHOD3Q2V2M9 1422 aa38.88■■■■□ 3.81
SSX2IP-209ENST00000603677 ATP10BO94823 1461 aa38.86■■■■□ 3.81
SSX2IP-209ENST00000603677 RANGAP1P46060 587 aaPredicted RBP38.85■■■■□ 3.81
SSX2IP-209ENST00000603677 MAP3K4Q9Y6R4 1608 aa38.81■■■■□ 3.8
SSX2IP-209ENST00000603677 TSPOAP1O95153 1857 aa38.81■■■■□ 3.8
SSX2IP-209ENST00000603677 FMN1Q68DA7 1419 aa38.76■■■■□ 3.8
SSX2IP-209ENST00000603677 TEX14Q8IWB6 1497 aa38.76■■■■□ 3.8
SSX2IP-209ENST00000603677 NUP153P49790 1475 aaKnown RBP38.74■■■■□ 3.79
SSX2IP-209ENST00000603677 ARHGAP35Q9NRY4 1499 aa38.73■■■■□ 3.79
SSX2IP-209ENST00000603677 EHMT2Q96KQ7 1210 aa38.72■■■■□ 3.79
SSX2IP-209ENST00000603677 PPRC1Q5VV67 1664 aaKnown RBP38.71■■■■□ 3.79
SSX2IP-209ENST00000603677 CFAP43Q8NDM7 1665 aa38.71■■■■□ 3.79
SSX2IP-209ENST00000603677 KDM6BO15054 1643 aa38.7■■■■□ 3.79
SSX2IP-209ENST00000603677 KCNH8Q96L42 1107 aa38.65■■■■□ 3.78
SSX2IP-209ENST00000603677 MAGI3Q5TCQ9 1506 aa38.64■■■■□ 3.78
SSX2IP-209ENST00000603677 CD109Q6YHK3 1445 aa38.63■■■■□ 3.78
SSX2IP-209ENST00000603677 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.61■■■■□ 3.77
SSX2IP-209ENST00000603677 HNRNPUL2Q1KMD3 747 aaKnown RBP38.61■■■■□ 3.77
SSX2IP-209ENST00000603677 PLEKHD1A6NEE1 506 aa38.58■■■■□ 3.77
SSX2IP-209ENST00000603677 ARID3CA6NKF2 412 aa38.58■■■■□ 3.77
SSX2IP-209ENST00000603677 ABCA9Q8IUA7 1624 aa38.54■■■■□ 3.76
SSX2IP-209ENST00000603677 HECW1Q76N89 1606 aa38.52■■■■□ 3.76
SSX2IP-209ENST00000603677 PHLDB1Q86UU1 1377 aa38.48■■■■□ 3.75
SSX2IP-209ENST00000603677 CDK11AQ9UQ88 783 aaPredicted RBP38.44■■■■□ 3.74
SSX2IP-209ENST00000603677 CLIP1P30622 1438 aa38.42■■■■□ 3.74
SSX2IP-209ENST00000603677 CASKIN1Q8WXD9 1431 aa38.37■■■■□ 3.73
SSX2IP-209ENST00000603677 COL17A1Q9UMD9 1497 aaPredicted RBP38.35■■■■□ 3.73
SSX2IP-209ENST00000603677 CDK13Q14004 1512 aaKnown RBP38.35■■■■□ 3.73
SSX2IP-209ENST00000603677 ATP1B4Q9UN42 357 aaPredicted RBP38.33■■■■□ 3.73
SSX2IP-209ENST00000603677 ARAP3Q8WWN8 1544 aa38.33■■■■□ 3.73
SSX2IP-209ENST00000603677 NEO1Q92859 1461 aa38.32■■■■□ 3.72
SSX2IP-209ENST00000603677 CCDC18Q5T9S5 1454 aa38.3■■■■□ 3.72
SSX2IP-209ENST00000603677 FYCO1Q9BQS8 1478 aa38.27■■■■□ 3.72
SSX2IP-209ENST00000603677 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP38.25■■■■□ 3.713e-6■■□□□ 13.1
SSX2IP-209ENST00000603677 PCF11O94913 1555 aaKnown RBP38.21■■■■□ 3.71
SSX2IP-209ENST00000603677 TROQ12816 1431 aaPredicted RBP38.2■■■■□ 3.71
SSX2IP-209ENST00000603677 CFAP74Q9C0B2 1584 aa38.19■■■■□ 3.7
SSX2IP-209ENST00000603677 LRRIQ1Q96JM4 1722 aa38.16■■■■□ 3.7
SSX2IP-209ENST00000603677 CEP162Q5TB80 1403 aa38.15■■■■□ 3.7
SSX2IP-209ENST00000603677 TTC37Q6PGP7 1564 aa38.13■■■■□ 3.69
SSX2IP-209ENST00000603677 KIF14Q15058 1648 aa38.12■■■■□ 3.69
SSX2IP-209ENST00000603677 AEBP2Q6ZN18 517 aaPredicted RBP38.11■■■■□ 3.69
SSX2IP-209ENST00000603677 PLCH2O75038 1416 aa38.11■■■■□ 3.69
SSX2IP-209ENST00000603677 FANCAO15360 1455 aa38.1■■■■□ 3.69
SSX2IP-209ENST00000603677 AKNAQ7Z591 1439 aa38.06■■■■□ 3.68
SSX2IP-209ENST00000603677 MYO5CQ9NQX4 1742 aa38.02■■■■□ 3.68
SSX2IP-209ENST00000603677 EFCAB2Q5VUJ9 269 aa37.99■■■■□ 3.67
SSX2IP-209ENST00000603677 DENND4BO75064 1496 aaPredicted RBP37.98■■■■□ 3.67
SSX2IP-209ENST00000603677 LOC105371045A0A1W2PR82 267 aa37.96■■■■□ 3.67
SSX2IP-209ENST00000603677 RAPGEF3O95398 923 aa37.93■■■■□ 3.66
SSX2IP-209ENST00000603677 RICTORQ6R327 1708 aa37.89■■■■□ 3.66
SSX2IP-209ENST00000603677 FRMPD1Q5SYB0 1578 aa37.89■■■■□ 3.66
SSX2IP-209ENST00000603677 KDM4FA0A1W2PPD8 638 aa37.88■■■■□ 3.65
SSX2IP-209ENST00000603677 ADGRL1O94910 1474 aa37.88■■■■□ 3.65
SSX2IP-209ENST00000603677 MAGI2Q86UL8 1455 aa37.84■■■■□ 3.65
SSX2IP-209ENST00000603677 ZMYM4Q5VZL5 1548 aa37.83■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms