RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
DDX55P1-201ENST00000603334 IGF1RP08069 1367 aa16.98■□□□□ 0.31
DDX55P1-201ENST00000603334 RUSC2Q8N2Y8 1516 aa16.98■□□□□ 0.31
DDX55P1-201ENST00000603334 CUL7Q14999 1698 aa16.98■□□□□ 0.31
DDX55P1-201ENST00000603334 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
DDX55P1-201ENST00000603334 CARMIL1Q5VZK9 1371 aa16.86■□□□□ 0.29
DDX55P1-201ENST00000603334 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
DDX55P1-201ENST00000603334 KIAA0586Q9BVV6 1533 aa16.84■□□□□ 0.29
DDX55P1-201ENST00000603334 JPH4Q96JJ6 628 aa16.83■□□□□ 0.28
DDX55P1-201ENST00000603334 EEA1Q15075 1411 aa16.82■□□□□ 0.28
DDX55P1-201ENST00000603334 FOXD1Q16676 465 aa16.79■□□□□ 0.28
DDX55P1-201ENST00000603334 RAPGEF2Q9Y4G8 1499 aa16.76■□□□□ 0.27
DDX55P1-201ENST00000603334 LOC105371045A0A1W2PR82 267 aa16.75■□□□□ 0.27
DDX55P1-201ENST00000603334 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
DDX55P1-201ENST00000603334 IQGAP2Q13576 1575 aa16.74■□□□□ 0.27
DDX55P1-201ENST00000603334 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
DDX55P1-201ENST00000603334 ADCY10Q96PN6 1610 aa16.73■□□□□ 0.27
DDX55P1-201ENST00000603334 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
DDX55P1-201ENST00000603334 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
DDX55P1-201ENST00000603334 KIF13AQ9H1H9 1805 aa16.7■□□□□ 0.26
DDX55P1-201ENST00000603334 CTTNBP2Q8WZ74 1663 aa16.68■□□□□ 0.26
DDX55P1-201ENST00000603334 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
DDX55P1-201ENST00000603334 UGGT2Q9NYU1 1516 aa16.66■□□□□ 0.26
DDX55P1-201ENST00000603334 MAPKBP1O60336 1514 aa16.62■□□□□ 0.25
DDX55P1-201ENST00000603334 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
DDX55P1-201ENST00000603334 TNIKQ9UKE5 1360 aa16.59■□□□□ 0.25
DDX55P1-201ENST00000603334 PTPRGP23470 1445 aa16.59■□□□□ 0.25
DDX55P1-201ENST00000603334 CARMIL2Q6F5E8 1435 aa16.59■□□□□ 0.25
DDX55P1-201ENST00000603334 DIP2BQ9P265 1576 aa16.57■□□□□ 0.24
DDX55P1-201ENST00000603334 ABCC10Q5T3U5 1492 aa16.55■□□□□ 0.24
DDX55P1-201ENST00000603334 KIF21BO75037 1637 aa16.54■□□□□ 0.24
DDX55P1-201ENST00000603334 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
DDX55P1-201ENST00000603334 ABCC2Q92887 1545 aa16.53■□□□□ 0.24
DDX55P1-201ENST00000603334 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.23
DDX55P1-201ENST00000603334 GOLGA3Q08378 1498 aa16.51■□□□□ 0.23
DDX55P1-201ENST00000603334 UACAQ9BZF9 1416 aa16.5■□□□□ 0.23
DDX55P1-201ENST00000603334 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
DDX55P1-201ENST00000603334 KDM5BQ9UGL1 1544 aa16.48■□□□□ 0.23
DDX55P1-201ENST00000603334 ZCCHC11Q5TAX3 1644 aaKnown RBP16.48■□□□□ 0.23
DDX55P1-201ENST00000603334 ABCA8O94911 1581 aa16.46■□□□□ 0.22
DDX55P1-201ENST00000603334 SAMD9Q5K651 1589 aa16.46■□□□□ 0.22
DDX55P1-201ENST00000603334 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDX55P1-201ENST00000603334 PLB1Q6P1J6 1458 aa16.45■□□□□ 0.22
DDX55P1-201ENST00000603334 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
DDX55P1-201ENST00000603334 ASXL2Q76L83 1435 aa16.44■□□□□ 0.22
DDX55P1-201ENST00000603334 PPRC1Q5VV67 1664 aaKnown RBP16.43■□□□□ 0.22
DDX55P1-201ENST00000603334 TSPOAP1O95153 1857 aa16.43■□□□□ 0.22
DDX55P1-201ENST00000603334 GLI2P10070 1586 aa16.41■□□□□ 0.22
DDX55P1-201ENST00000603334 EPRSP07814 1512 aaKnown RBP16.37■□□□□ 0.21
DDX55P1-201ENST00000603334 MAP3K4Q9Y6R4 1608 aa16.36■□□□□ 0.21
DDX55P1-201ENST00000603334 EFCAB5A4FU69 1503 aa16.35■□□□□ 0.21
DDX55P1-201ENST00000603334 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
DDX55P1-201ENST00000603334 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
DDX55P1-201ENST00000603334 P3H3Q8IVL6 736 aa16.31■□□□□ 0.2
DDX55P1-201ENST00000603334 KDM6BO15054 1643 aa16.31■□□□□ 0.2
DDX55P1-201ENST00000603334 RAPGEF6Q8TEU7 1601 aa16.3■□□□□ 0.2
DDX55P1-201ENST00000603334 FHOD3Q2V2M9 1422 aa16.28■□□□□ 0.2
DDX55P1-201ENST00000603334 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
DDX55P1-201ENST00000603334 ATP10BO94823 1461 aa16.27■□□□□ 0.2
DDX55P1-201ENST00000603334 CFAP43Q8NDM7 1665 aa16.25■□□□□ 0.19
DDX55P1-201ENST00000603334 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
DDX55P1-201ENST00000603334 COL17A1Q9UMD9 1497 aaPredicted RBP16.24■□□□□ 0.19
DDX55P1-201ENST00000603334 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
DDX55P1-201ENST00000603334 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
DDX55P1-201ENST00000603334 CLIP1P30622 1438 aa16.2■□□□□ 0.18
DDX55P1-201ENST00000603334 ABCA9Q8IUA7 1624 aa16.19■□□□□ 0.18
DDX55P1-201ENST00000603334 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
DDX55P1-201ENST00000603334 MAGI3Q5TCQ9 1506 aa16.18■□□□□ 0.18
DDX55P1-201ENST00000603334 TEX14Q8IWB6 1497 aa16.17■□□□□ 0.18
DDX55P1-201ENST00000603334 CD109Q6YHK3 1445 aa16.16■□□□□ 0.18
DDX55P1-201ENST00000603334 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
DDX55P1-201ENST00000603334 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
DDX55P1-201ENST00000603334 CDK13Q14004 1512 aaKnown RBP16.11■□□□□ 0.17
DDX55P1-201ENST00000603334 HECW1Q76N89 1606 aa16.08■□□□□ 0.16
DDX55P1-201ENST00000603334 PLEKHD1A6NEE1 506 aa16.07■□□□□ 0.16
DDX55P1-201ENST00000603334 CASKIN1Q8WXD9 1431 aa16.07■□□□□ 0.16
DDX55P1-201ENST00000603334 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.06■□□□□ 0.16
DDX55P1-201ENST00000603334 ARAP3Q8WWN8 1544 aa16.06■□□□□ 0.16
DDX55P1-201ENST00000603334 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.06■□□□□ 0.16
DDX55P1-201ENST00000603334 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
DDX55P1-201ENST00000603334 CDK11AQ9UQ88 783 aaPredicted RBP16.06■□□□□ 0.16
DDX55P1-201ENST00000603334 TTC37Q6PGP7 1564 aa16.06■□□□□ 0.16
DDX55P1-201ENST00000603334 KDM4FA0A1W2PPD8 638 aa16.04■□□□□ 0.16
DDX55P1-201ENST00000603334 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
DDX55P1-201ENST00000603334 ADRA2BP18089 450 aa16.03■□□□□ 0.16
DDX55P1-201ENST00000603334 APLP2Q06481 763 aa16.03■□□□□ 0.16
DDX55P1-201ENST00000603334 PCF11O94913 1555 aaKnown RBP16.03■□□□□ 0.16
DDX55P1-201ENST00000603334 FRMPD1Q5SYB0 1578 aa16.03■□□□□ 0.16
DDX55P1-201ENST00000603334 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
DDX55P1-201ENST00000603334 CCDC18Q5T9S5 1454 aa16.02■□□□□ 0.15
DDX55P1-201ENST00000603334 VPS8Q8N3P4 1428 aa16■□□□□ 0.15
DDX55P1-201ENST00000603334 NEO1Q92859 1461 aa16■□□□□ 0.15
DDX55P1-201ENST00000603334 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
DDX55P1-201ENST00000603334 KIF14Q15058 1648 aa15.99■□□□□ 0.15
DDX55P1-201ENST00000603334 PPP6R1Q9UPN7 881 aa15.99■□□□□ 0.15
DDX55P1-201ENST00000603334 RICTORQ6R327 1708 aa15.98■□□□□ 0.15
DDX55P1-201ENST00000603334 ADGRL1O94910 1474 aa15.97■□□□□ 0.15
DDX55P1-201ENST00000603334 PHLDB1Q86UU1 1377 aa15.96■□□□□ 0.15
DDX55P1-201ENST00000603334 CFAP74Q9C0B2 1584 aa15.94■□□□□ 0.14
DDX55P1-201ENST00000603334 FANCAO15360 1455 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms