RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	JPH4	Q96JJ6	628 aa		32.98	■■■□□ 2.87
IRF3-231	ENST00000602190	MAPKBP1	O60336	1514 aa		32.94	■■■□□ 2.86
IRF3-231	ENST00000602190	ABCC10	Q5T3U5	1492 aa		32.92	■■■□□ 2.86
IRF3-231	ENST00000602190	ADCY10	Q96PN6	1610 aa		32.87	■■■□□ 2.85
IRF3-231	ENST00000602190	DIP2B	Q9P265	1576 aa		32.85	■■■□□ 2.85
IRF3-231	ENST00000602190	KIAA0586	Q9BVV6	1533 aa		32.8	■■■□□ 2.84
IRF3-231	ENST00000602190	CUL7	Q14999	1698 aa		32.75	■■■□□ 2.83
IRF3-231	ENST00000602190	IGF1R	P08069	1367 aa		32.72	■■■□□ 2.83
IRF3-231	ENST00000602190	FAM69C	Q0P6D2	419 aa		32.7	■■■□□ 2.83
IRF3-231	ENST00000602190	KIF27	Q86VH2	1401 aa		32.64	■■■□□ 2.82
IRF3-231	ENST00000602190	NPM1	P06748	294 aa	Known RBP eCLIP	32.62	■■■□□ 2.81
IRF3-231	ENST00000602190	KDM6B	O15054	1643 aa		32.59	■■■□□ 2.81
IRF3-231	ENST00000602190	TSPOAP1	O95153	1857 aa		32.48	■■■□□ 2.79
IRF3-231	ENST00000602190	ABCC2	Q92887	1545 aa		32.46	■■■□□ 2.79
IRF3-231	ENST00000602190	PTPRG	P23470	1445 aa		32.46	■■■□□ 2.79
IRF3-231	ENST00000602190	CARMIL1	Q5VZK9	1371 aa		32.45	■■■□□ 2.78
IRF3-231	ENST00000602190	PPRC1	Q5VV67	1664 aa	Known RBP	32.44	■■■□□ 2.78
IRF3-231	ENST00000602190	GLI2	P10070	1586 aa		32.44	■■■□□ 2.78
IRF3-231	ENST00000602190	KDM4F	A0A1W2PPD8	638 aa		32.42	■■■□□ 2.78
IRF3-231	ENST00000602190	TNIK	Q9UKE5	1360 aa		32.42	■■■□□ 2.78
IRF3-231	ENST00000602190	UHRF1BP1L	A0JNW5	1464 aa		32.42	■■■□□ 2.78
IRF3-231	ENST00000602190	IQGAP2	Q13576	1575 aa		32.41	■■■□□ 2.78
IRF3-231	ENST00000602190	CARMIL2	Q6F5E8	1435 aa		32.37	■■■□□ 2.77
IRF3-231	ENST00000602190	PLB1	Q6P1J6	1458 aa		32.35	■■■□□ 2.77
IRF3-231	ENST00000602190	ASXL2	Q76L83	1435 aa		32.34	■■■□□ 2.77
IRF3-231	ENST00000602190	DISP1	Q96F81	1524 aa		32.33	■■■□□ 2.77
IRF3-231	ENST00000602190	KDM5B	Q9UGL1	1544 aa		32.27	■■■□□ 2.76
IRF3-231	ENST00000602190	UACA	Q9BZF9	1416 aa		32.26	■■■□□ 2.76
IRF3-231	ENST00000602190	UGGT2	Q9NYU1	1516 aa		32.26	■■■□□ 2.75
IRF3-231	ENST00000602190	MAP3K4	Q9Y6R4	1608 aa		32.23	■■■□□ 2.75
IRF3-231	ENST00000602190	EPRS	P07814	1512 aa	Known RBP	32.19	■■■□□ 2.74
IRF3-231	ENST00000602190	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.16	■■■□□ 2.74
IRF3-231	ENST00000602190	KIAA0556	O60303	1618 aa		32.15	■■■□□ 2.74
IRF3-231	ENST00000602190	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.15	■■■□□ 2.74
IRF3-231	ENST00000602190	RAPGEF2	Q9Y4G8	1499 aa		32.13	■■■□□ 2.73
IRF3-231	ENST00000602190	ADGRL1	O94910	1474 aa		32.08	■■■□□ 2.73
IRF3-231	ENST00000602190	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32.06	■■■□□ 2.72
IRF3-231	ENST00000602190	TEX14	Q8IWB6	1497 aa		32.05	■■■□□ 2.72
IRF3-231	ENST00000602190	WDR7	Q9Y4E6	1490 aa		31.98	■■■□□ 2.71
IRF3-231	ENST00000602190	CTTNBP2	Q8WZ74	1663 aa		31.98	■■■□□ 2.71
IRF3-231	ENST00000602190	ABCA8	O94911	1581 aa		31.93	■■■□□ 2.7
IRF3-231	ENST00000602190	MAGI3	Q5TCQ9	1506 aa		31.9	■■■□□ 2.7
IRF3-231	ENST00000602190	CFAP43	Q8NDM7	1665 aa		31.89	■■■□□ 2.7
IRF3-231	ENST00000602190	GOLGA3	Q08378	1498 aa		31.84	■■■□□ 2.69
IRF3-231	ENST00000602190	HECW2	Q9P2P5	1572 aa		31.81	■■■□□ 2.68
IRF3-231	ENST00000602190	PRX	Q9BXM0	1461 aa		31.79	■■■□□ 2.68
IRF3-231	ENST00000602190	ILDR1	Q86SU0	546 aa	Predicted RBP	31.78	■■■□□ 2.68
IRF3-231	ENST00000602190	CD109	Q6YHK3	1445 aa		31.76	■■■□□ 2.68
IRF3-231	ENST00000602190	ARAP3	Q8WWN8	1544 aa		31.67	■■■□□ 2.66
IRF3-231	ENST00000602190	KIF21B	O75037	1637 aa		31.6	■■■□□ 2.65
IRF3-231	ENST00000602190	ABCA9	Q8IUA7	1624 aa		31.59	■■■□□ 2.65
IRF3-231	ENST00000602190	ATP10B	O94823	1461 aa		31.58	■■■□□ 2.65
IRF3-231	ENST00000602190	KCNH8	Q96L42	1107 aa		31.55	■■■□□ 2.64
IRF3-231	ENST00000602190	SAMD9	Q5K651	1589 aa		31.55	■■■□□ 2.64
IRF3-231	ENST00000602190	PHLDB1	Q86UU1	1377 aa		31.51	■■■□□ 2.63
IRF3-231	ENST00000602190	ADAMTSL3	P82987	1691 aa		31.48	■■■□□ 2.63
IRF3-231	ENST00000602190	RAPGEF6	Q8TEU7	1601 aa		31.42	■■■□□ 2.62
IRF3-231	ENST00000602190	NEO1	Q92859	1461 aa		31.42	■■■□□ 2.62
IRF3-231	ENST00000602190	FRMPD1	Q5SYB0	1578 aa		31.42	■■■□□ 2.62
IRF3-231	ENST00000602190	PTPRM	P28827	1452 aa		31.35	■■■□□ 2.61
IRF3-231	ENST00000602190	BCORL1	Q5H9F3	1711 aa		31.33	■■■□□ 2.61
IRF3-231	ENST00000602190	NUP153	P49790	1475 aa	Known RBP	31.33	■■■□□ 2.61
IRF3-231	ENST00000602190	P3H3	Q8IVL6	736 aa		31.29	■■■□□ 2.6
IRF3-231	ENST00000602190	ARID3C	A6NKF2	412 aa		31.26	■■■□□ 2.59
IRF3-231	ENST00000602190	RAPGEF3	O95398	923 aa		31.25	■■■□□ 2.59
IRF3-231	ENST00000602190	FAM9A	Q8IZU1	332 aa	Predicted RBP	31.25	■■■□□ 2.59
IRF3-231	ENST00000602190	CSRNP3	Q8WYN3	585 aa		31.24	■■■□□ 2.59
IRF3-231	ENST00000602190	RICTOR	Q6R327	1708 aa		31.24	■■■□□ 2.59
IRF3-231	ENST00000602190	ARHGEF40	Q8TER5	1519 aa		31.24	■■■□□ 2.59
IRF3-231	ENST00000602190	MADD	Q8WXG6	1647 aa		31.23	■■■□□ 2.59
IRF3-231	ENST00000602190	PCF11	O94913	1555 aa	Known RBP	31.17	■■■□□ 2.58
IRF3-231	ENST00000602190	EEA1	Q15075	1411 aa		31.16	■■■□□ 2.58
IRF3-231	ENST00000602190	FHOD3	Q2V2M9	1422 aa		31.15	■■■□□ 2.58
IRF3-231	ENST00000602190	LMTK3	Q96Q04	1460 aa		31.15	■■■□□ 2.58
IRF3-231	ENST00000602190	ZMYM4	Q5VZL5	1548 aa		31.15	■■■□□ 2.58
IRF3-231	ENST00000602190	FBXO41	Q8TF61	875 aa		31.14	■■■□□ 2.58
IRF3-231	ENST00000602190	CFAP74	Q9C0B2	1584 aa		31.13	■■■□□ 2.57
IRF3-231	ENST00000602190	DENND4B	O75064	1496 aa	Predicted RBP	31.12	■■■□□ 2.57
IRF3-231	ENST00000602190	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.12	■■■□□ 2.57
IRF3-231	ENST00000602190	EFCAB5	A4FU69	1503 aa		31.08	■■■□□ 2.57
IRF3-231	ENST00000602190	AKNA	Q7Z591	1439 aa		31.08	■■■□□ 2.57
IRF3-231	ENST00000602190	SIGLEC1	Q9BZZ2	1709 aa		31.08	■■■□□ 2.57
IRF3-231	ENST00000602190	TTC37	Q6PGP7	1564 aa		31.08	■■■□□ 2.57
IRF3-231	ENST00000602190	FANCA	O15360	1455 aa		31.07	■■■□□ 2.56
IRF3-231	ENST00000602190	RIMS1	Q86UR5	1692 aa	Known RBP	31.06	■■■□□ 2.56
IRF3-231	ENST00000602190	MAGI2	Q86UL8	1455 aa		31.01	■■■□□ 2.55
IRF3-231	ENST00000602190	PLEKHD1	A6NEE1	506 aa		31	■■■□□ 2.55
IRF3-231	ENST00000602190	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31	■■■□□ 2.55
IRF3-231	ENST00000602190	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31	■■■□□ 2.55
IRF3-231	ENST00000602190	ZFYVE16	Q7Z3T8	1539 aa		30.98	■■■□□ 2.55
IRF3-231	ENST00000602190	YEATS2	Q9ULM3	1422 aa		30.95	■■■□□ 2.54
IRF3-231	ENST00000602190	ARID4B	Q4LE39	1312 aa	Predicted RBP	30.95	■■■□□ 2.54
IRF3-231	ENST00000602190	HECW1	Q76N89	1606 aa		30.94	■■■□□ 2.54
IRF3-231	ENST00000602190	POGZ	Q7Z3K3	1410 aa		30.91	■■■□□ 2.54
IRF3-231	ENST00000602190	CDK13	Q14004	1512 aa	Known RBP	30.91	■■■□□ 2.54
IRF3-231	ENST00000602190	PLCH2	O75038	1416 aa		30.9	■■■□□ 2.54
IRF3-231	ENST00000602190	FER1L4	A9Z1Z3	1794 aa		30.87	■■■□□ 2.53
IRF3-231	ENST00000602190	ARHGEF12	Q9NZN5	1544 aa		30.84	■■■□□ 2.53
IRF3-231	ENST00000602190	SCAPER	Q9BY12	1400 aa		30.81	■■■□□ 2.52
IRF3-231	ENST00000602190	MYO5C	Q9NQX4	1742 aa		30.8	■■■□□ 2.52

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms