RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 EEA1Q15075 1411 aa15.91■□□□□ 0.14
SHANK2-218ENST00000601538 TNNT3P45378 269 aaPredicted RBP15.86■□□□□ 0.13
SHANK2-218ENST00000601538 PPP4R2Q9NY27 417 aa15.85■□□□□ 0.13
SHANK2-218ENST00000601538 MRS2Q9HD23 443 aa15.84■□□□□ 0.13
SHANK2-218ENST00000601538 DDX10Q13206 875 aaKnown RBP15.82■□□□□ 0.12
SHANK2-218ENST00000601538 CHMP4BQ9H444 224 aaKnown RBP15.81■□□□□ 0.12
SHANK2-218ENST00000601538 FANCIQ9NVI1 1328 aa15.8■□□□□ 0.12
SHANK2-218ENST00000601538 MIER1Q8N108 512 aa15.8■□□□□ 0.12
SHANK2-218ENST00000601538 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
SHANK2-218ENST00000601538 CFAP44Q96MT7 982 aa15.78■□□□□ 0.12
SHANK2-218ENST00000601538 RBM19Q9Y4C8 960 aaKnown RBP15.77■□□□□ 0.12
SHANK2-218ENST00000601538 PRKCSHP14314 528 aaPredicted RBP15.77■□□□□ 0.12
SHANK2-218ENST00000601538 ZCCHC6Q5VYS8 1495 aaKnown RBP15.76■□□□□ 0.11
SHANK2-218ENST00000601538 HSP90AA2PQ14568 343 aaPredicted RBP15.76■□□□□ 0.11
SHANK2-218ENST00000601538 MTERF4Q7Z6M4 381 aaKnown RBP15.76■□□□□ 0.11
SHANK2-218ENST00000601538 RTN4Q9NQC3 1192 aaKnown RBP15.76■□□□□ 0.11
SHANK2-218ENST00000601538 PNNQ9H307 717 aaKnown RBP15.75■□□□□ 0.11
SHANK2-218ENST00000601538 LAS1LQ9Y4W2 734 aaKnown RBP15.75■□□□□ 0.11
SHANK2-218ENST00000601538 CALRP27797 417 aaKnown RBP15.74■□□□□ 0.11
SHANK2-218ENST00000601538 KIAA2012Q0VF49 1180 aa15.72■□□□□ 0.11
SHANK2-218ENST00000601538 CCER2I3L3R5 266 aa15.72■□□□□ 0.11
SHANK2-218ENST00000601538 HSP90AB1P08238 724 aaKnown RBP15.71■□□□□ 0.11
SHANK2-218ENST00000601538 GOLGA6L1Q8N7Z2 621 aa15.71■□□□□ 0.11
SHANK2-218ENST00000601538 FTSJ3Q8IY81 847 aaKnown RBP15.7■□□□□ 0.1
SHANK2-218ENST00000601538 SETQ01105 290 aaPredicted RBP15.69■□□□□ 0.1
SHANK2-218ENST00000601538 MS4A1P11836 297 aa15.69■□□□□ 0.1
SHANK2-218ENST00000601538 SALL2Q9Y467 1007 aaPredicted RBP15.69■□□□□ 0.1
SHANK2-218ENST00000601538 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
SHANK2-218ENST00000601538 HSCBQ8IWL3 235 aa15.68■□□□□ 0.1
SHANK2-218ENST00000601538 PLCB2Q00722 1185 aa15.68■□□□□ 0.1
SHANK2-218ENST00000601538 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
SHANK2-218ENST00000601538 TIMELESSQ9UNS1 1208 aa15.67■□□□□ 0.1
SHANK2-218ENST00000601538 ESF1Q9H501 851 aaKnown RBP15.66■□□□□ 0.1
SHANK2-218ENST00000601538 DRC7Q8IY82 874 aa15.66■□□□□ 0.1
SHANK2-218ENST00000601538 PKNOX2Q96KN3 472 aa15.65■□□□□ 0.1
SHANK2-218ENST00000601538 AMER1Q5JTC6 1135 aaPredicted RBP15.65■□□□□ 0.1
SHANK2-218ENST00000601538 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
SHANK2-218ENST00000601538 SYAP1Q96A49 352 aaPredicted RBP15.63■□□□□ 0.09
SHANK2-218ENST00000601538 EIF4G2P78344 907 aaKnown RBP eCLIP15.62■□□□□ 0.09
SHANK2-218ENST00000601538 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
SHANK2-218ENST00000601538 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
SHANK2-218ENST00000601538 GBP4Q96PP9 640 aa15.61■□□□□ 0.09
SHANK2-218ENST00000601538 NOC3LQ8WTT2 800 aaKnown RBP15.61■□□□□ 0.09
SHANK2-218ENST00000601538 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
SHANK2-218ENST00000601538 MCCP23508 829 aa15.6■□□□□ 0.09
SHANK2-218ENST00000601538 IPO9Q96P70 1041 aaKnown RBP15.59■□□□□ 0.09
SHANK2-218ENST00000601538 CDCA8Q53HL2 280 aa15.59■□□□□ 0.09
SHANK2-218ENST00000601538 CFAP53Q96M91 514 aa15.59■□□□□ 0.09
SHANK2-218ENST00000601538 TAF3Q5VWG9 929 aa15.56■□□□□ 0.08
SHANK2-218ENST00000601538 FGD1P98174 961 aa15.56■□□□□ 0.08
SHANK2-218ENST00000601538 GOLGA3Q08378 1498 aa15.56■□□□□ 0.08
SHANK2-218ENST00000601538 A0A0U1RQG5 324 aaPredicted RBP15.55■□□□□ 0.08
SHANK2-218ENST00000601538 GOLGA6L3A6NEY3 463 aa15.54■□□□□ 0.08
SHANK2-218ENST00000601538 HTATSF1O43719 755 aaKnown RBP15.54■□□□□ 0.08
SHANK2-218ENST00000601538 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
SHANK2-218ENST00000601538 ZNF777Q9ULD5 760 aaPredicted RBP15.52■□□□□ 0.08
SHANK2-218ENST00000601538 TPM4P67936 248 aa15.52■□□□□ 0.07
SHANK2-218ENST00000601538 PHF14O94880 888 aa15.52■□□□□ 0.07
SHANK2-218ENST00000601538 CCDC34Q96HJ3 373 aa15.5■□□□□ 0.07
SHANK2-218ENST00000601538 UBE2Q2Q8WVN8 375 aa15.49■□□□□ 0.07
SHANK2-218ENST00000601538 KCNJ4P48050 445 aa15.49■□□□□ 0.07
SHANK2-218ENST00000601538 RRP9O43818 475 aaKnown RBP15.49■□□□□ 0.07
SHANK2-218ENST00000601538 RB1CC1Q8TDY2 1594 aa15.48■□□□□ 0.07
SHANK2-218ENST00000601538 CSPP1Q1MSJ5 1256 aa15.47■□□□□ 0.07
SHANK2-218ENST00000601538 CEP162Q5TB80 1403 aa15.46■□□□□ 0.07
SHANK2-218ENST00000601538 CLIP1P30622 1438 aa15.46■□□□□ 0.07
SHANK2-218ENST00000601538 PODXL2Q9NZ53 605 aa15.46■□□□□ 0.07
SHANK2-218ENST00000601538 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
SHANK2-218ENST00000601538 FBLN2P98095 1184 aa15.46■□□□□ 0.06
SHANK2-218ENST00000601538 TPRNQ4KMQ1 711 aa15.45■□□□□ 0.06
SHANK2-218ENST00000601538 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
SHANK2-218ENST00000601538 GPS2Q13227 327 aa15.45■□□□□ 0.06
SHANK2-218ENST00000601538 GSE1Q14687 1217 aa15.44■□□□□ 0.06
SHANK2-218ENST00000601538 RGS3P49796 1198 aa15.43■□□□□ 0.06
SHANK2-218ENST00000601538 VSIG10Q8N0Z9 540 aa15.43■□□□□ 0.06
SHANK2-218ENST00000601538 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
SHANK2-218ENST00000601538 HAP1P54257 671 aaPredicted RBP15.4■□□□□ 0.06
SHANK2-218ENST00000601538 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.4■□□□□ 0.06
SHANK2-218ENST00000601538 MAPK8IP3Q9UPT6 1336 aa15.4■□□□□ 0.06
SHANK2-218ENST00000601538 GNL2Q13823 731 aaKnown RBP15.4■□□□□ 0.06
SHANK2-218ENST00000601538 ISY1Q9ULR0 285 aaKnown RBP15.4■□□□□ 0.06
SHANK2-218ENST00000601538 TPM2P07951 284 aa15.4■□□□□ 0.06
SHANK2-218ENST00000601538 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.4■□□□□ 0.06
SHANK2-218ENST00000601538 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
SHANK2-218ENST00000601538 DDX11L8A8MPP1 907 aa15.39■□□□□ 0.05
SHANK2-218ENST00000601538 NOM1Q5C9Z4 860 aaKnown RBP15.38■□□□□ 0.05
SHANK2-218ENST00000601538 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
SHANK2-218ENST00000601538 TULP1O00294 542 aaPredicted RBP15.37■□□□□ 0.05
SHANK2-218ENST00000601538 TEX35Q5T0J7 233 aa15.37■□□□□ 0.05
SHANK2-218ENST00000601538 OS9Q13438 667 aaPredicted RBP15.37■□□□□ 0.05
SHANK2-218ENST00000601538 TSPY4P0CV99 314 aa15.35■□□□□ 0.05
SHANK2-218ENST00000601538 TSPY10P0CW01 314 aa15.35■□□□□ 0.05
SHANK2-218ENST00000601538 CCDC70Q6NSX1 233 aa15.35■□□□□ 0.05
SHANK2-218ENST00000601538 FAM43AQ8N2R8 423 aa15.35■□□□□ 0.05
SHANK2-218ENST00000601538 SKOR2Q2VWA4 1001 aaPredicted RBP15.35■□□□□ 0.05
SHANK2-218ENST00000601538 MTUS2Q5JR59 1369 aa15.35■□□□□ 0.05
SHANK2-218ENST00000601538 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
SHANK2-218ENST00000601538 PHLDB1Q86UU1 1377 aa15.34■□□□□ 0.05
SHANK2-218ENST00000601538 BAZ1AQ9NRL2 1556 aaPredicted RBP15.34■□□□□ 0.05
SHANK2-218ENST00000601538 NAP1L2Q9ULW6 460 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms