RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 FAM9AQ8IZU1 332 aaPredicted RBP33.61■■■□□ 2.97
SSBP4-210ENST00000601444 JPH4Q96JJ6 628 aa33.61■■■□□ 2.97
SSBP4-210ENST00000601444 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
SSBP4-210ENST00000601444 ERCC6L2Q5T890 1561 aa33.6■■■□□ 2.97
SSBP4-210ENST00000601444 SHROOM2Q13796 1616 aa33.59■■■□□ 2.97
SSBP4-210ENST00000601444 KIAA0586Q9BVV6 1533 aa33.58■■■□□ 2.97
SSBP4-210ENST00000601444 PRXQ9BXM0 1461 aa33.57■■■□□ 2.97
SSBP4-210ENST00000601444 EEA1Q15075 1411 aa33.53■■■□□ 2.96
SSBP4-210ENST00000601444 PRG4Q92954 1404 aaPredicted RBP33.52■■■□□ 2.96
SSBP4-210ENST00000601444 IQGAP2Q13576 1575 aa33.39■■■□□ 2.94
SSBP4-210ENST00000601444 CTTNBP2Q8WZ74 1663 aa33.26■■■□□ 2.92
SSBP4-210ENST00000601444 EHMT2Q96KQ7 1210 aa33.23■■■□□ 2.91
SSBP4-210ENST00000601444 UGGT2Q9NYU1 1516 aa33.23■■■□□ 2.91
SSBP4-210ENST00000601444 DISP1Q96F81 1524 aa33.21■■■□□ 2.91
SSBP4-210ENST00000601444 KIF21BO75037 1637 aa33.2■■■□□ 2.91
SSBP4-210ENST00000601444 CARMIL2Q6F5E8 1435 aa33.19■■■□□ 2.9
SSBP4-210ENST00000601444 TTBK1Q5TCY1 1321 aaPredicted RBP33.18■■■□□ 2.9
SSBP4-210ENST00000601444 TNIKQ9UKE5 1360 aa33.12■■■□□ 2.89
SSBP4-210ENST00000601444 PTPRGP23470 1445 aa33.11■■■□□ 2.89
SSBP4-210ENST00000601444 KIAA0556O60303 1618 aa33.09■■■□□ 2.89
SSBP4-210ENST00000601444 GOLGA3Q08378 1498 aa33.04■■■□□ 2.88
SSBP4-210ENST00000601444 UBTFP17480 764 aaKnown RBP33.03■■■□□ 2.88
SSBP4-210ENST00000601444 RANGAP1P46060 587 aaPredicted RBP33.03■■■□□ 2.88
SSBP4-210ENST00000601444 P3H3Q8IVL6 736 aa32.99■■■□□ 2.87
SSBP4-210ENST00000601444 ADCY10Q96PN6 1610 aa32.97■■■□□ 2.87
SSBP4-210ENST00000601444 TRHP20396 242 aaPredicted RBP32.91■■■□□ 2.86
SSBP4-210ENST00000601444 SAMD9Q5K651 1589 aa32.89■■■□□ 2.86
SSBP4-210ENST00000601444 UACAQ9BZF9 1416 aa32.88■■■□□ 2.85
SSBP4-210ENST00000601444 NPM1P06748 294 aaKnown RBP eCLIP32.86■■■□□ 2.85
SSBP4-210ENST00000601444 PLB1Q6P1J6 1458 aa32.82■■■□□ 2.84
SSBP4-210ENST00000601444 UHRF1BP1LA0JNW5 1464 aa32.81■■■□□ 2.84
SSBP4-210ENST00000601444 ABCC2Q92887 1545 aa32.79■■■□□ 2.84
SSBP4-210ENST00000601444 FHOD3Q2V2M9 1422 aa32.77■■■□□ 2.84
SSBP4-210ENST00000601444 ABCA8O94911 1581 aa32.73■■■□□ 2.83
SSBP4-210ENST00000601444 EFCAB5A4FU69 1503 aa32.72■■■□□ 2.83
SSBP4-210ENST00000601444 MAPKBP1O60336 1514 aa32.69■■■□□ 2.82
SSBP4-210ENST00000601444 ARHGAP35Q9NRY4 1499 aa32.67■■■□□ 2.82
SSBP4-210ENST00000601444 KDM5BQ9UGL1 1544 aa32.67■■■□□ 2.82
SSBP4-210ENST00000601444 LOC105371045A0A1W2PR82 267 aa32.62■■■□□ 2.81
SSBP4-210ENST00000601444 ARID3CA6NKF2 412 aa32.61■■■□□ 2.81
SSBP4-210ENST00000601444 ZCCHC11Q5TAX3 1644 aaKnown RBP32.61■■■□□ 2.81
SSBP4-210ENST00000601444 ASXL2Q76L83 1435 aa32.6■■■□□ 2.81
SSBP4-210ENST00000601444 ABCC10Q5T3U5 1492 aa32.58■■■□□ 2.81
SSBP4-210ENST00000601444 FAM69CQ0P6D2 419 aa32.57■■■□□ 2.8
SSBP4-210ENST00000601444 RAPGEF6Q8TEU7 1601 aa32.55■■■□□ 2.8
SSBP4-210ENST00000601444 KIF13AQ9H1H9 1805 aa32.53■■■□□ 2.8
SSBP4-210ENST00000601444 DIP2BQ9P265 1576 aa32.51■■■□□ 2.79
SSBP4-210ENST00000601444 ATP10BO94823 1461 aa32.51■■■□□ 2.79
SSBP4-210ENST00000601444 NUP153P49790 1475 aaKnown RBP32.48■■■□□ 2.79
SSBP4-210ENST00000601444 CLIP1P30622 1438 aa32.48■■■□□ 2.79
SSBP4-210ENST00000601444 FMN1Q68DA7 1419 aa32.44■■■□□ 2.78
SSBP4-210ENST00000601444 WDR7Q9Y4E6 1490 aa32.42■■■□□ 2.78
SSBP4-210ENST00000601444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.41■■■□□ 2.78
SSBP4-210ENST00000601444 HNRNPUL2Q1KMD3 747 aaKnown RBP32.41■■■□□ 2.78
SSBP4-210ENST00000601444 ATP1B4Q9UN42 357 aaPredicted RBP32.39■■■□□ 2.78
SSBP4-210ENST00000601444 EPRSP07814 1512 aaKnown RBP32.39■■■□□ 2.78
SSBP4-210ENST00000601444 KCNH8Q96L42 1107 aa32.37■■■□□ 2.77
SSBP4-210ENST00000601444 CEP162Q5TB80 1403 aa32.36■■■□□ 2.77
SSBP4-210ENST00000601444 GLI2P10070 1586 aa32.32■■■□□ 2.77
SSBP4-210ENST00000601444 CDK13Q14004 1512 aaKnown RBP32.29■■■□□ 2.76
SSBP4-210ENST00000601444 HECW1Q76N89 1606 aa32.26■■■□□ 2.76
SSBP4-210ENST00000601444 TSPOAP1O95153 1857 aa32.25■■■□□ 2.75
SSBP4-210ENST00000601444 PCF11O94913 1555 aaKnown RBP32.24■■■□□ 2.75
SSBP4-210ENST00000601444 CASKIN1Q8WXD9 1431 aa32.23■■■□□ 2.75
SSBP4-210ENST00000601444 PLEKHD1A6NEE1 506 aa32.22■■■□□ 2.75
SSBP4-210ENST00000601444 MAP3K4Q9Y6R4 1608 aa32.2■■■□□ 2.75
SSBP4-210ENST00000601444 LRRIQ1Q96JM4 1722 aa32.17■■■□□ 2.74
SSBP4-210ENST00000601444 PPRC1Q5VV67 1664 aaKnown RBP32.16■■■□□ 2.74
SSBP4-210ENST00000601444 CD109Q6YHK3 1445 aa32.13■■■□□ 2.73
SSBP4-210ENST00000601444 FYCO1Q9BQS8 1478 aa32.12■■■□□ 2.73
SSBP4-210ENST00000601444 CFAP43Q8NDM7 1665 aa32.08■■■□□ 2.73
SSBP4-210ENST00000601444 CDK11AQ9UQ88 783 aaPredicted RBP32.06■■■□□ 2.72
SSBP4-210ENST00000601444 ABCA9Q8IUA7 1624 aa32.06■■■□□ 2.72
SSBP4-210ENST00000601444 CCDC18Q5T9S5 1454 aa32.04■■■□□ 2.72
SSBP4-210ENST00000601444 MAGI3Q5TCQ9 1506 aa32.02■■■□□ 2.72
SSBP4-210ENST00000601444 TEX14Q8IWB6 1497 aa32■■■□□ 2.71
SSBP4-210ENST00000601444 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32■■■□□ 2.71
SSBP4-210ENST00000601444 TROQ12816 1431 aaPredicted RBP31.98■■■□□ 2.71
SSBP4-210ENST00000601444 KDM6BO15054 1643 aa31.96■■■□□ 2.71
SSBP4-210ENST00000601444 COL17A1Q9UMD9 1497 aaPredicted RBP31.95■■■□□ 2.7
SSBP4-210ENST00000601444 TTC37Q6PGP7 1564 aa31.94■■■□□ 2.7
SSBP4-210ENST00000601444 VPS8Q8N3P4 1428 aa31.94■■■□□ 2.7
SSBP4-210ENST00000601444 KIF14Q15058 1648 aa31.93■■■□□ 2.7
SSBP4-210ENST00000601444 PLCH2O75038 1416 aa31.81■■■□□ 2.68
SSBP4-210ENST00000601444 NEO1Q92859 1461 aa31.78■■■□□ 2.68
SSBP4-210ENST00000601444 MTUS2Q5JR59 1369 aa31.78■■■□□ 2.68
SSBP4-210ENST00000601444 FANCAO15360 1455 aa31.77■■■□□ 2.68
SSBP4-210ENST00000601444 ARAP3Q8WWN8 1544 aa31.75■■■□□ 2.67
SSBP4-210ENST00000601444 PHLDB1Q86UU1 1377 aa31.74■■■□□ 2.67
SSBP4-210ENST00000601444 AKNAQ7Z591 1439 aa31.73■■■□□ 2.67
SSBP4-210ENST00000601444 TIAM1Q13009 1591 aa31.73■■■□□ 2.67
SSBP4-210ENST00000601444 MYO5CQ9NQX4 1742 aa31.72■■■□□ 2.67
SSBP4-210ENST00000601444 RAPGEF3O95398 923 aa31.7■■■□□ 2.67
SSBP4-210ENST00000601444 EFCAB2Q5VUJ9 269 aa31.68■■■□□ 2.66
SSBP4-210ENST00000601444 EHBP1L1Q8N3D4 1523 aa31.68■■■□□ 2.66
SSBP4-210ENST00000601444 ARHGAP5Q13017 1502 aa31.66■■■□□ 2.66
SSBP4-210ENST00000601444 KANK4Q5T7N3 995 aaPredicted RBP31.66■■■□□ 2.66
SSBP4-210ENST00000601444 CFAP74Q9C0B2 1584 aa31.65■■■□□ 2.66
SSBP4-210ENST00000601444 CDC42BPBQ9Y5S2 1711 aa31.63■■■□□ 2.65
SSBP4-210ENST00000601444 GPATCH8Q9UKJ3 1502 aaKnown RBP31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms