RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 KIF27Q86VH2 1401 aa31.58■■■□□ 2.65
CHMP2A-208ENST00000601220 KIAA0586Q9BVV6 1533 aa31.49■■■□□ 2.63
CHMP2A-208ENST00000601220 CUL7Q14999 1698 aa31.44■■■□□ 2.62
CHMP2A-208ENST00000601220 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
CHMP2A-208ENST00000601220 KIF13AQ9H1H9 1805 aa31.31■■■□□ 2.6
CHMP2A-208ENST00000601220 ADCY10Q96PN6 1610 aa31.31■■■□□ 2.6
CHMP2A-208ENST00000601220 ABCC10Q5T3U5 1492 aa31.29■■■□□ 2.6
CHMP2A-208ENST00000601220 NPM1P06748 294 aaKnown RBP eCLIP31.29■■■□□ 2.6
CHMP2A-208ENST00000601220 MAPKBP1O60336 1514 aa31.28■■■□□ 2.6
CHMP2A-208ENST00000601220 FAM69CQ0P6D2 419 aa31.26■■■□□ 2.59
CHMP2A-208ENST00000601220 PTPRGP23470 1445 aa31.21■■■□□ 2.59
CHMP2A-208ENST00000601220 DIP2BQ9P265 1576 aa31.15■■■□□ 2.58
CHMP2A-208ENST00000601220 AEBP2Q6ZN18 517 aaPredicted RBP31.15■■■□□ 2.58
CHMP2A-208ENST00000601220 TNIKQ9UKE5 1360 aa31.15■■■□□ 2.58
CHMP2A-208ENST00000601220 CARMIL2Q6F5E8 1435 aa31.13■■■□□ 2.57
CHMP2A-208ENST00000601220 IQGAP2Q13576 1575 aa31.12■■■□□ 2.57
CHMP2A-208ENST00000601220 RAPGEF2Q9Y4G8 1499 aa31.08■■■□□ 2.57
CHMP2A-208ENST00000601220 TTBK1Q5TCY1 1321 aaPredicted RBP31.07■■■□□ 2.56
CHMP2A-208ENST00000601220 DISP1Q96F81 1524 aa31.07■■■□□ 2.56
CHMP2A-208ENST00000601220 ABCC2Q92887 1545 aa31.03■■■□□ 2.56
CHMP2A-208ENST00000601220 UHRF1BP1LA0JNW5 1464 aa31■■■□□ 2.55
CHMP2A-208ENST00000601220 UGGT2Q9NYU1 1516 aa30.99■■■□□ 2.55
CHMP2A-208ENST00000601220 UACAQ9BZF9 1416 aa30.97■■■□□ 2.55
CHMP2A-208ENST00000601220 ASXL2Q76L83 1435 aa30.93■■■□□ 2.54
CHMP2A-208ENST00000601220 PLB1Q6P1J6 1458 aa30.9■■■□□ 2.54
CHMP2A-208ENST00000601220 KDM5BQ9UGL1 1544 aa30.86■■■□□ 2.53
CHMP2A-208ENST00000601220 KIAA0556O60303 1618 aa30.85■■■□□ 2.53
CHMP2A-208ENST00000601220 GLI2P10070 1586 aa30.84■■■□□ 2.53
CHMP2A-208ENST00000601220 KDM6BO15054 1643 aa30.84■■■□□ 2.53
CHMP2A-208ENST00000601220 PRXQ9BXM0 1461 aa30.82■■■□□ 2.52
CHMP2A-208ENST00000601220 TSPOAP1O95153 1857 aa30.81■■■□□ 2.52
CHMP2A-208ENST00000601220 EPRSP07814 1512 aaKnown RBP30.75■■■□□ 2.51
CHMP2A-208ENST00000601220 PPRC1Q5VV67 1664 aaKnown RBP30.74■■■□□ 2.51
CHMP2A-208ENST00000601220 ZCCHC11Q5TAX3 1644 aaKnown RBP30.7■■■□□ 2.51
CHMP2A-208ENST00000601220 KDM4FA0A1W2PPD8 638 aa30.7■■■□□ 2.51
CHMP2A-208ENST00000601220 CTTNBP2Q8WZ74 1663 aa30.7■■■□□ 2.5
CHMP2A-208ENST00000601220 GOLGA3Q08378 1498 aa30.69■■■□□ 2.5
CHMP2A-208ENST00000601220 COL17A1Q9UMD9 1497 aaPredicted RBP30.64■■■□□ 2.5
CHMP2A-208ENST00000601220 MAP3K4Q9Y6R4 1608 aa30.63■■■□□ 2.49
CHMP2A-208ENST00000601220 ABCA8O94911 1581 aa30.62■■■□□ 2.49
CHMP2A-208ENST00000601220 WDR7Q9Y4E6 1490 aa30.61■■■□□ 2.49
CHMP2A-208ENST00000601220 CSRNP3Q8WYN3 585 aa30.56■■■□□ 2.48
CHMP2A-208ENST00000601220 TEX14Q8IWB6 1497 aa30.53■■■□□ 2.48
CHMP2A-208ENST00000601220 P3H3Q8IVL6 736 aa30.46■■■□□ 2.47
CHMP2A-208ENST00000601220 KCNH8Q96L42 1107 aa30.46■■■□□ 2.47
CHMP2A-208ENST00000601220 CD109Q6YHK3 1445 aa30.44■■■□□ 2.46
CHMP2A-208ENST00000601220 MAGI3Q5TCQ9 1506 aa30.43■■■□□ 2.46
CHMP2A-208ENST00000601220 ATP10BO94823 1461 aa30.4■■■□□ 2.46
CHMP2A-208ENST00000601220 SAMD9Q5K651 1589 aa30.37■■■□□ 2.45
CHMP2A-208ENST00000601220 EEA1Q15075 1411 aa30.37■■■□□ 2.45
CHMP2A-208ENST00000601220 CFAP43Q8NDM7 1665 aa30.36■■■□□ 2.45
CHMP2A-208ENST00000601220 ARID3CA6NKF2 412 aa30.35■■■□□ 2.45
CHMP2A-208ENST00000601220 ADGRL1O94910 1474 aa30.35■■■□□ 2.45
CHMP2A-208ENST00000601220 FAM9AQ8IZU1 332 aaPredicted RBP30.33■■■□□ 2.45
CHMP2A-208ENST00000601220 RAPGEF6Q8TEU7 1601 aa30.22■■■□□ 2.43
CHMP2A-208ENST00000601220 ARAP3Q8WWN8 1544 aa30.2■■■□□ 2.42
CHMP2A-208ENST00000601220 NUP153P49790 1475 aaKnown RBP30.19■■■□□ 2.42
CHMP2A-208ENST00000601220 RANGAP1P46060 587 aaPredicted RBP30.19■■■□□ 2.42
CHMP2A-208ENST00000601220 FHOD3Q2V2M9 1422 aa30.19■■■□□ 2.42
CHMP2A-208ENST00000601220 ABCA9Q8IUA7 1624 aa30.18■■■□□ 2.42
CHMP2A-208ENST00000601220 PHLDB1Q86UU1 1377 aa30.13■■■□□ 2.41
CHMP2A-208ENST00000601220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.11■■■□□ 2.41
CHMP2A-208ENST00000601220 HNRNPUL2Q1KMD3 747 aaKnown RBP30.11■■■□□ 2.41
CHMP2A-208ENST00000601220 KIF21BO75037 1637 aa30.11■■■□□ 2.41
CHMP2A-208ENST00000601220 NEO1Q92859 1461 aa30.05■■■□□ 2.4
CHMP2A-208ENST00000601220 RAPGEF3O95398 923 aa30.04■■■□□ 2.4
CHMP2A-208ENST00000601220 EFCAB5A4FU69 1503 aa30.04■■■□□ 2.4
CHMP2A-208ENST00000601220 PLEKHD1A6NEE1 506 aa30.02■■■□□ 2.4
CHMP2A-208ENST00000601220 CHIC1Q5VXU3 224 aa30.01■■■□□ 2.39
CHMP2A-208ENST00000601220 FRMPD1Q5SYB0 1578 aa29.92■■■□□ 2.38
CHMP2A-208ENST00000601220 HECW2Q9P2P5 1572 aa29.91■■■□□ 2.38
CHMP2A-208ENST00000601220 UBTFP17480 764 aaKnown RBP29.9■■■□□ 2.38
CHMP2A-208ENST00000601220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.9■■■□□ 2.38
CHMP2A-208ENST00000601220 EHMT2Q96KQ7 1210 aa29.89■■■□□ 2.38
CHMP2A-208ENST00000601220 AKNAQ7Z591 1439 aa29.87■■■□□ 2.37
CHMP2A-208ENST00000601220 CDK13Q14004 1512 aaKnown RBP29.86■■■□□ 2.37
CHMP2A-208ENST00000601220 ARHGAP35Q9NRY4 1499 aa29.85■■■□□ 2.37
CHMP2A-208ENST00000601220 FANCAO15360 1455 aa29.83■■■□□ 2.37
CHMP2A-208ENST00000601220 DENND4BO75064 1496 aaPredicted RBP29.82■■■□□ 2.36
CHMP2A-208ENST00000601220 TTC37Q6PGP7 1564 aa29.81■■■□□ 2.36
CHMP2A-208ENST00000601220 ADAMTSL3P82987 1691 aa29.81■■■□□ 2.36
CHMP2A-208ENST00000601220 FMN1Q68DA7 1419 aa29.79■■■□□ 2.36
CHMP2A-208ENST00000601220 PTPRMP28827 1452 aa29.77■■■□□ 2.36
CHMP2A-208ENST00000601220 PLCH2O75038 1416 aa29.75■■■□□ 2.35
CHMP2A-208ENST00000601220 RICTORQ6R327 1708 aa29.75■■■□□ 2.35
CHMP2A-208ENST00000601220 ILDR1Q86SU0 546 aaPredicted RBP29.73■■■□□ 2.35
CHMP2A-208ENST00000601220 CFAP74Q9C0B2 1584 aa29.73■■■□□ 2.35
CHMP2A-208ENST00000601220 ARHGEF40Q8TER5 1519 aa29.72■■■□□ 2.35
CHMP2A-208ENST00000601220 ARID4BQ4LE39 1312 aaPredicted RBP29.71■■■□□ 2.35
CHMP2A-208ENST00000601220 ATP1B4Q9UN42 357 aaPredicted RBP29.71■■■□□ 2.35
CHMP2A-208ENST00000601220 BCORL1Q5H9F3 1711 aa29.71■■■□□ 2.35
CHMP2A-208ENST00000601220 HECW1Q76N89 1606 aa29.7■■■□□ 2.34
CHMP2A-208ENST00000601220 ZMYM4Q5VZL5 1548 aa29.69■■■□□ 2.34
CHMP2A-208ENST00000601220 YEATS2Q9ULM3 1422 aa29.66■■■□□ 2.34
CHMP2A-208ENST00000601220 SCAPERQ9BY12 1400 aa29.65■■■□□ 2.34
CHMP2A-208ENST00000601220 CDK11AQ9UQ88 783 aaPredicted RBP29.65■■■□□ 2.34
CHMP2A-208ENST00000601220 MADDQ8WXG6 1647 aa29.63■■■□□ 2.33
CHMP2A-208ENST00000601220 MAGI2Q86UL8 1455 aa29.63■■■□□ 2.33
CHMP2A-208ENST00000601220 POGZQ7Z3K3 1410 aa29.62■■■□□ 2.33
CHMP2A-208ENST00000601220 EFCAB2Q5VUJ9 269 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms