RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 JPH4Q96JJ6 628 aa24.23■■□□□ 1.47
USP29-204ENST00000600940 PRG4Q92954 1404 aaPredicted RBP24.22■■□□□ 1.47
USP29-204ENST00000600940 KIF27Q86VH2 1401 aa24.14■■□□□ 1.45
USP29-204ENST00000600940 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
USP29-204ENST00000600940 NPM1P06748 294 aaKnown RBP eCLIP24.1■■□□□ 1.45
USP29-204ENST00000600940 IGF1RP08069 1367 aa24.08■■□□□ 1.45
USP29-204ENST00000600940 CUL7Q14999 1698 aa24.05■■□□□ 1.44
USP29-204ENST00000600940 KIAA0586Q9BVV6 1533 aa24.01■■□□□ 1.43
USP29-204ENST00000600940 TTBK1Q5TCY1 1321 aaPredicted RBP23.98■■□□□ 1.43
USP29-204ENST00000600940 CARMIL1Q5VZK9 1371 aa23.97■■□□□ 1.43
USP29-204ENST00000600940 KIF13AQ9H1H9 1805 aa23.96■■□□□ 1.43
USP29-204ENST00000600940 FAM69CQ0P6D2 419 aa23.95■■□□□ 1.42
USP29-204ENST00000600940 ADCY10Q96PN6 1610 aa23.89■■□□□ 1.42
USP29-204ENST00000600940 FOXD1Q16676 465 aa23.88■■□□□ 1.41
USP29-204ENST00000600940 PTPRGP23470 1445 aa23.86■■□□□ 1.41
USP29-204ENST00000600940 CARMIL2Q6F5E8 1435 aa23.86■■□□□ 1.41
USP29-204ENST00000600940 ABCC10Q5T3U5 1492 aa23.86■■□□□ 1.41
USP29-204ENST00000600940 MAPKBP1O60336 1514 aa23.84■■□□□ 1.41
USP29-204ENST00000600940 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
USP29-204ENST00000600940 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
USP29-204ENST00000600940 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
USP29-204ENST00000600940 DIP2BQ9P265 1576 aa23.78■■□□□ 1.4
USP29-204ENST00000600940 TSPOAP1O95153 1857 aa23.75■■□□□ 1.39
USP29-204ENST00000600940 RAPGEF2Q9Y4G8 1499 aa23.74■■□□□ 1.39
USP29-204ENST00000600940 ABCC2Q92887 1545 aa23.68■■□□□ 1.38
USP29-204ENST00000600940 KDM6BO15054 1643 aa23.66■■□□□ 1.38
USP29-204ENST00000600940 UACAQ9BZF9 1416 aa23.65■■□□□ 1.38
USP29-204ENST00000600940 DISP1Q96F81 1524 aa23.64■■□□□ 1.37
USP29-204ENST00000600940 ASXL2Q76L83 1435 aa23.63■■□□□ 1.37
USP29-204ENST00000600940 PLB1Q6P1J6 1458 aa23.62■■□□□ 1.37
USP29-204ENST00000600940 UGGT2Q9NYU1 1516 aa23.6■■□□□ 1.37
USP29-204ENST00000600940 UHRF1BP1LA0JNW5 1464 aa23.6■■□□□ 1.37
USP29-204ENST00000600940 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
USP29-204ENST00000600940 CTTNBP2Q8WZ74 1663 aa23.54■■□□□ 1.36
USP29-204ENST00000600940 GLI2P10070 1586 aa23.5■■□□□ 1.35
USP29-204ENST00000600940 GOLGA3Q08378 1498 aa23.49■■□□□ 1.35
USP29-204ENST00000600940 KDM5BQ9UGL1 1544 aa23.49■■□□□ 1.35
USP29-204ENST00000600940 ZCCHC11Q5TAX3 1644 aaKnown RBP23.49■■□□□ 1.35
USP29-204ENST00000600940 FAM9AQ8IZU1 332 aaPredicted RBP23.49■■□□□ 1.35
USP29-204ENST00000600940 EPRSP07814 1512 aaKnown RBP23.45■■□□□ 1.34
USP29-204ENST00000600940 PPRC1Q5VV67 1664 aaKnown RBP23.42■■□□□ 1.34
USP29-204ENST00000600940 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
USP29-204ENST00000600940 KDM4FA0A1W2PPD8 638 aa23.4■■□□□ 1.34
USP29-204ENST00000600940 KCNH8Q96L42 1107 aa23.4■■□□□ 1.34
USP29-204ENST00000600940 TEX14Q8IWB6 1497 aa23.4■■□□□ 1.34
USP29-204ENST00000600940 WDR7Q9Y4E6 1490 aa23.38■■□□□ 1.33
USP29-204ENST00000600940 MAP3K4Q9Y6R4 1608 aa23.38■■□□□ 1.33
USP29-204ENST00000600940 P3H3Q8IVL6 736 aa23.38■■□□□ 1.33
USP29-204ENST00000600940 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
USP29-204ENST00000600940 ARID3CA6NKF2 412 aa23.33■■□□□ 1.33
USP29-204ENST00000600940 ABCA8O94911 1581 aa23.32■■□□□ 1.32
USP29-204ENST00000600940 RANGAP1P46060 587 aaPredicted RBP23.29■■□□□ 1.32
USP29-204ENST00000600940 CD109Q6YHK3 1445 aa23.28■■□□□ 1.32
USP29-204ENST00000600940 COL17A1Q9UMD9 1497 aaPredicted RBP23.28■■□□□ 1.32
USP29-204ENST00000600940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
USP29-204ENST00000600940 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
USP29-204ENST00000600940 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
USP29-204ENST00000600940 ADGRL1O94910 1474 aa23.23■■□□□ 1.31
USP29-204ENST00000600940 MAGI3Q5TCQ9 1506 aa23.19■■□□□ 1.3
USP29-204ENST00000600940 EEA1Q15075 1411 aa23.18■■□□□ 1.3
USP29-204ENST00000600940 ATP10BO94823 1461 aa23.17■■□□□ 1.3
USP29-204ENST00000600940 SAMD9Q5K651 1589 aa23.14■■□□□ 1.29
USP29-204ENST00000600940 RAPGEF6Q8TEU7 1601 aa23.12■■□□□ 1.29
USP29-204ENST00000600940 EHMT2Q96KQ7 1210 aa23.07■■□□□ 1.28
USP29-204ENST00000600940 FHOD3Q2V2M9 1422 aa23.07■■□□□ 1.28
USP29-204ENST00000600940 ABCA9Q8IUA7 1624 aa23.03■■□□□ 1.28
USP29-204ENST00000600940 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
USP29-204ENST00000600940 ARAP3Q8WWN8 1544 aa23.01■■□□□ 1.27
USP29-204ENST00000600940 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
USP29-204ENST00000600940 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
USP29-204ENST00000600940 UBTFP17480 764 aaKnown RBP23■■□□□ 1.27
USP29-204ENST00000600940 KIF21BO75037 1637 aa22.99■■□□□ 1.27
USP29-204ENST00000600940 RAPGEF3O95398 923 aa22.97■■□□□ 1.27
USP29-204ENST00000600940 EFCAB5A4FU69 1503 aa22.95■■□□□ 1.26
USP29-204ENST00000600940 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
USP29-204ENST00000600940 NEO1Q92859 1461 aa22.93■■□□□ 1.26
USP29-204ENST00000600940 ARID4BQ4LE39 1312 aaPredicted RBP22.91■■□□□ 1.26
USP29-204ENST00000600940 HECW2Q9P2P5 1572 aa22.9■■□□□ 1.26
USP29-204ENST00000600940 FANCAO15360 1455 aa22.83■■□□□ 1.25
USP29-204ENST00000600940 DENND4BO75064 1496 aaPredicted RBP22.82■■□□□ 1.24
USP29-204ENST00000600940 CDK13Q14004 1512 aaKnown RBP22.82■■□□□ 1.24
USP29-204ENST00000600940 AKNAQ7Z591 1439 aa22.82■■□□□ 1.24
USP29-204ENST00000600940 CFAP74Q9C0B2 1584 aa22.81■■□□□ 1.24
USP29-204ENST00000600940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.81■■□□□ 1.24
USP29-204ENST00000600940 FMN1Q68DA7 1419 aa22.8■■□□□ 1.24
USP29-204ENST00000600940 CDK11AQ9UQ88 783 aaPredicted RBP22.79■■□□□ 1.24
USP29-204ENST00000600940 FRMPD1Q5SYB0 1578 aa22.78■■□□□ 1.24
USP29-204ENST00000600940 PPP6R1Q9UPN7 881 aa22.78■■□□□ 1.24
USP29-204ENST00000600940 TTC37Q6PGP7 1564 aa22.77■■□□□ 1.24
USP29-204ENST00000600940 ILDR1Q86SU0 546 aaPredicted RBP22.77■■□□□ 1.24
USP29-204ENST00000600940 ADRA2BP18089 450 aa22.76■■□□□ 1.23
USP29-204ENST00000600940 HECW1Q76N89 1606 aa22.75■■□□□ 1.23
USP29-204ENST00000600940 PTPRMP28827 1452 aa22.74■■□□□ 1.23
USP29-204ENST00000600940 ADAMTSL3P82987 1691 aa22.74■■□□□ 1.23
USP29-204ENST00000600940 RICTORQ6R327 1708 aa22.74■■□□□ 1.23
USP29-204ENST00000600940 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
USP29-204ENST00000600940 BCORL1Q5H9F3 1711 aa22.72■■□□□ 1.23
USP29-204ENST00000600940 ARHGEF40Q8TER5 1519 aa22.71■■□□□ 1.23
USP29-204ENST00000600940 MADDQ8WXG6 1647 aa22.68■■□□□ 1.22
USP29-204ENST00000600940 PLCH2O75038 1416 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms