RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
ZNF548-211ENST00000600927 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
ZNF548-211ENST00000600927 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
ZNF548-211ENST00000600927 PRG4Q92954 1404 aaPredicted RBP19.1■□□□□ 0.65
ZNF548-211ENST00000600927 JPH4Q96JJ6 628 aa19.09■□□□□ 0.65
ZNF548-211ENST00000600927 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
ZNF548-211ENST00000600927 IQGAP2Q13576 1575 aa19.04■□□□□ 0.64
ZNF548-211ENST00000600927 EEA1Q15075 1411 aa19■□□□□ 0.63
ZNF548-211ENST00000600927 UGGT2Q9NYU1 1516 aa18.97■□□□□ 0.63
ZNF548-211ENST00000600927 CTTNBP2Q8WZ74 1663 aa18.96■□□□□ 0.63
ZNF548-211ENST00000600927 DISP1Q96F81 1524 aa18.95■□□□□ 0.62
ZNF548-211ENST00000600927 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
ZNF548-211ENST00000600927 CARMIL2Q6F5E8 1435 aa18.9■□□□□ 0.62
ZNF548-211ENST00000600927 KIAA0556O60303 1618 aa18.89■□□□□ 0.62
ZNF548-211ENST00000600927 ADCY10Q96PN6 1610 aa18.89■□□□□ 0.62
ZNF548-211ENST00000600927 TNIKQ9UKE5 1360 aa18.87■□□□□ 0.61
ZNF548-211ENST00000600927 KIF21BO75037 1637 aa18.85■□□□□ 0.61
ZNF548-211ENST00000600927 PTPRGP23470 1445 aa18.83■□□□□ 0.61
ZNF548-211ENST00000600927 MAPKBP1O60336 1514 aa18.81■□□□□ 0.6
ZNF548-211ENST00000600927 UHRF1BP1LA0JNW5 1464 aa18.8■□□□□ 0.6
ZNF548-211ENST00000600927 GOLGA3Q08378 1498 aa18.79■□□□□ 0.6
ZNF548-211ENST00000600927 SAMD9Q5K651 1589 aa18.76■□□□□ 0.59
ZNF548-211ENST00000600927 ABCC2Q92887 1545 aa18.76■□□□□ 0.59
ZNF548-211ENST00000600927 UACAQ9BZF9 1416 aa18.75■□□□□ 0.59
ZNF548-211ENST00000600927 TRHP20396 242 aaPredicted RBP18.74■□□□□ 0.59
ZNF548-211ENST00000600927 FAM9AQ8IZU1 332 aaPredicted RBP18.73■□□□□ 0.59
ZNF548-211ENST00000600927 KIF13AQ9H1H9 1805 aa18.71■□□□□ 0.59
ZNF548-211ENST00000600927 KDM5BQ9UGL1 1544 aa18.7■□□□□ 0.58
ZNF548-211ENST00000600927 ABCA8O94911 1581 aa18.7■□□□□ 0.58
ZNF548-211ENST00000600927 ABCC10Q5T3U5 1492 aa18.7■□□□□ 0.58
ZNF548-211ENST00000600927 DIP2BQ9P265 1576 aa18.69■□□□□ 0.58
ZNF548-211ENST00000600927 PLB1Q6P1J6 1458 aa18.67■□□□□ 0.58
ZNF548-211ENST00000600927 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
ZNF548-211ENST00000600927 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.57
ZNF548-211ENST00000600927 ZCCHC11Q5TAX3 1644 aaKnown RBP18.63■□□□□ 0.57
ZNF548-211ENST00000600927 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
ZNF548-211ENST00000600927 ASXL2Q76L83 1435 aa18.61■□□□□ 0.57
ZNF548-211ENST00000600927 GLI2P10070 1586 aa18.58■□□□□ 0.56
ZNF548-211ENST00000600927 FHOD3Q2V2M9 1422 aa18.56■□□□□ 0.56
ZNF548-211ENST00000600927 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
ZNF548-211ENST00000600927 RAPGEF6Q8TEU7 1601 aa18.55■□□□□ 0.56
ZNF548-211ENST00000600927 FAM69CQ0P6D2 419 aa18.54■□□□□ 0.56
ZNF548-211ENST00000600927 P3H3Q8IVL6 736 aa18.53■□□□□ 0.56
ZNF548-211ENST00000600927 EPRSP07814 1512 aaKnown RBP18.53■□□□□ 0.56
ZNF548-211ENST00000600927 WDR7Q9Y4E6 1490 aa18.52■□□□□ 0.56
ZNF548-211ENST00000600927 ARHGAP35Q9NRY4 1499 aa18.51■□□□□ 0.55
ZNF548-211ENST00000600927 NUP153P49790 1475 aaKnown RBP18.5■□□□□ 0.55
ZNF548-211ENST00000600927 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
ZNF548-211ENST00000600927 ATP10BO94823 1461 aa18.49■□□□□ 0.55
ZNF548-211ENST00000600927 MAP3K4Q9Y6R4 1608 aa18.49■□□□□ 0.55
ZNF548-211ENST00000600927 PPRC1Q5VV67 1664 aaKnown RBP18.48■□□□□ 0.55
ZNF548-211ENST00000600927 RANGAP1P46060 587 aaPredicted RBP18.44■□□□□ 0.54
ZNF548-211ENST00000600927 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
ZNF548-211ENST00000600927 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
ZNF548-211ENST00000600927 CFAP43Q8NDM7 1665 aa18.4■□□□□ 0.54
ZNF548-211ENST00000600927 TSPOAP1O95153 1857 aa18.39■□□□□ 0.54
ZNF548-211ENST00000600927 KDM6BO15054 1643 aa18.36■□□□□ 0.53
ZNF548-211ENST00000600927 MAGI3Q5TCQ9 1506 aa18.36■□□□□ 0.53
ZNF548-211ENST00000600927 HECW1Q76N89 1606 aa18.36■□□□□ 0.53
ZNF548-211ENST00000600927 ABCA9Q8IUA7 1624 aa18.35■□□□□ 0.53
ZNF548-211ENST00000600927 TEX14Q8IWB6 1497 aa18.34■□□□□ 0.53
ZNF548-211ENST00000600927 ARID3CA6NKF2 412 aa18.34■□□□□ 0.53
ZNF548-211ENST00000600927 CDK13Q14004 1512 aaKnown RBP18.32■□□□□ 0.52
ZNF548-211ENST00000600927 CLIP1P30622 1438 aa18.32■□□□□ 0.52
ZNF548-211ENST00000600927 CD109Q6YHK3 1445 aa18.32■□□□□ 0.52
ZNF548-211ENST00000600927 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
ZNF548-211ENST00000600927 LRRIQ1Q96JM4 1722 aa18.29■□□□□ 0.52
ZNF548-211ENST00000600927 COL17A1Q9UMD9 1497 aaPredicted RBP18.28■□□□□ 0.52
ZNF548-211ENST00000600927 KCNH8Q96L42 1107 aa18.28■□□□□ 0.52
ZNF548-211ENST00000600927 CASKIN1Q8WXD9 1431 aa18.28■□□□□ 0.52
ZNF548-211ENST00000600927 FYCO1Q9BQS8 1478 aa18.25■□□□□ 0.51
ZNF548-211ENST00000600927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.51
ZNF548-211ENST00000600927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
ZNF548-211ENST00000600927 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
ZNF548-211ENST00000600927 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
ZNF548-211ENST00000600927 TTC37Q6PGP7 1564 aa18.22■□□□□ 0.51
ZNF548-211ENST00000600927 PLEKHD1A6NEE1 506 aa18.22■□□□□ 0.51
ZNF548-211ENST00000600927 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
ZNF548-211ENST00000600927 ARAP3Q8WWN8 1544 aa18.2■□□□□ 0.5
ZNF548-211ENST00000600927 NEO1Q92859 1461 aa18.2■□□□□ 0.5
ZNF548-211ENST00000600927 TROQ12816 1431 aaPredicted RBP18.18■□□□□ 0.5
ZNF548-211ENST00000600927 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
ZNF548-211ENST00000600927 KIF14Q15058 1648 aa18.16■□□□□ 0.5
ZNF548-211ENST00000600927 CFAP74Q9C0B2 1584 aa18.13■□□□□ 0.49
ZNF548-211ENST00000600927 CDK11AQ9UQ88 783 aaPredicted RBP18.12■□□□□ 0.49
ZNF548-211ENST00000600927 FRMPD1Q5SYB0 1578 aa18.12■□□□□ 0.49
ZNF548-211ENST00000600927 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
ZNF548-211ENST00000600927 PLCH2O75038 1416 aa18.11■□□□□ 0.49
ZNF548-211ENST00000600927 FANCAO15360 1455 aa18.1■□□□□ 0.49
ZNF548-211ENST00000600927 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
ZNF548-211ENST00000600927 AKNAQ7Z591 1439 aa18.06■□□□□ 0.48
ZNF548-211ENST00000600927 RICTORQ6R327 1708 aa18.05■□□□□ 0.48
ZNF548-211ENST00000600927 PREX2Q70Z35 1606 aa18.04■□□□□ 0.48
ZNF548-211ENST00000600927 VPS8Q8N3P4 1428 aa18.04■□□□□ 0.48
ZNF548-211ENST00000600927 DENND4BO75064 1496 aaPredicted RBP18.02■□□□□ 0.48
ZNF548-211ENST00000600927 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.47
ZNF548-211ENST00000600927 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
ZNF548-211ENST00000600927 ADGRL1O94910 1474 aa18■□□□□ 0.47
ZNF548-211ENST00000600927 POGZQ7Z3K3 1410 aa17.99■□□□□ 0.47
ZNF548-211ENST00000600927 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms