RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 JPH4Q96JJ6 628 aa28.71■■■□□ 2.19
NOTCH3-205ENST00000600841 PRG4Q92954 1404 aaPredicted RBP28.69■■■□□ 2.18
NOTCH3-205ENST00000600841 KIAA0586Q9BVV6 1533 aa28.66■■■□□ 2.18
NOTCH3-205ENST00000600841 TRHP20396 242 aaPredicted RBP28.59■■■□□ 2.17
NOTCH3-205ENST00000600841 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
NOTCH3-205ENST00000600841 IQGAP2Q13576 1575 aa28.46■■■□□ 2.15
NOTCH3-205ENST00000600841 CARMIL2Q6F5E8 1435 aa28.38■■■□□ 2.13
NOTCH3-205ENST00000600841 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
NOTCH3-205ENST00000600841 PTPRGP23470 1445 aa28.31■■■□□ 2.12
NOTCH3-205ENST00000600841 TNIKQ9UKE5 1360 aa28.3■■■□□ 2.12
NOTCH3-205ENST00000600841 CTTNBP2Q8WZ74 1663 aa28.29■■■□□ 2.12
NOTCH3-205ENST00000600841 ADCY10Q96PN6 1610 aa28.29■■■□□ 2.12
NOTCH3-205ENST00000600841 UGGT2Q9NYU1 1516 aa28.29■■■□□ 2.12
NOTCH3-205ENST00000600841 NPM1P06748 294 aaKnown RBP eCLIP28.28■■■□□ 2.12
NOTCH3-205ENST00000600841 DISP1Q96F81 1524 aa28.27■■■□□ 2.12
NOTCH3-205ENST00000600841 TTBK1Q5TCY1 1321 aaPredicted RBP28.26■■■□□ 2.11
NOTCH3-205ENST00000600841 CSRNP3Q8WYN3 585 aa28.26■■■□□ 2.11
NOTCH3-205ENST00000600841 EEA1Q15075 1411 aa28.25■■■□□ 2.11
NOTCH3-205ENST00000600841 KIAA0556O60303 1618 aa28.19■■■□□ 2.1
NOTCH3-205ENST00000600841 MAPKBP1O60336 1514 aa28.18■■■□□ 2.1
NOTCH3-205ENST00000600841 CHIC1Q5VXU3 224 aa28.14■■■□□ 2.1
NOTCH3-205ENST00000600841 KIF13AQ9H1H9 1805 aa28.13■■■□□ 2.09
NOTCH3-205ENST00000600841 GOLGA3Q08378 1498 aa28.13■■■□□ 2.09
NOTCH3-205ENST00000600841 UACAQ9BZF9 1416 aa28.11■■■□□ 2.09
NOTCH3-205ENST00000600841 FAM9AQ8IZU1 332 aaPredicted RBP28.1■■■□□ 2.09
NOTCH3-205ENST00000600841 UHRF1BP1LA0JNW5 1464 aa28.09■■■□□ 2.09
NOTCH3-205ENST00000600841 ABCC2Q92887 1545 aa28.09■■■□□ 2.09
NOTCH3-205ENST00000600841 ABCC10Q5T3U5 1492 aa28.08■■■□□ 2.09
NOTCH3-205ENST00000600841 FAM69CQ0P6D2 419 aa28.05■■■□□ 2.08
NOTCH3-205ENST00000600841 DIP2BQ9P265 1576 aa28.03■■■□□ 2.08
NOTCH3-205ENST00000600841 KIF21BO75037 1637 aa27.97■■■□□ 2.07
NOTCH3-205ENST00000600841 KDM5BQ9UGL1 1544 aa27.96■■■□□ 2.07
NOTCH3-205ENST00000600841 ASXL2Q76L83 1435 aa27.95■■■□□ 2.07
NOTCH3-205ENST00000600841 PLB1Q6P1J6 1458 aa27.94■■■□□ 2.06
NOTCH3-205ENST00000600841 ZCCHC11Q5TAX3 1644 aaKnown RBP27.91■■■□□ 2.06
NOTCH3-205ENST00000600841 P3H3Q8IVL6 736 aa27.9■■■□□ 2.06
NOTCH3-205ENST00000600841 ABCA8O94911 1581 aa27.9■■■□□ 2.06
NOTCH3-205ENST00000600841 SAMD9Q5K651 1589 aa27.9■■■□□ 2.06
NOTCH3-205ENST00000600841 TSPOAP1O95153 1857 aa27.85■■■□□ 2.05
NOTCH3-205ENST00000600841 RANGAP1P46060 587 aaPredicted RBP27.83■■■□□ 2.05
NOTCH3-205ENST00000600841 GLI2P10070 1586 aa27.82■■■□□ 2.04
NOTCH3-205ENST00000600841 EPRSP07814 1512 aaKnown RBP27.77■■■□□ 2.04
NOTCH3-205ENST00000600841 EHMT2Q96KQ7 1210 aa27.77■■■□□ 2.04
NOTCH3-205ENST00000600841 WDR7Q9Y4E6 1490 aa27.76■■■□□ 2.04
NOTCH3-205ENST00000600841 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
NOTCH3-205ENST00000600841 EFCAB5A4FU69 1503 aa27.73■■■□□ 2.03
NOTCH3-205ENST00000600841 FHOD3Q2V2M9 1422 aa27.73■■■□□ 2.03
NOTCH3-205ENST00000600841 RAPGEF6Q8TEU7 1601 aa27.7■■■□□ 2.03
NOTCH3-205ENST00000600841 MAP3K4Q9Y6R4 1608 aa27.68■■■□□ 2.02
NOTCH3-205ENST00000600841 ARID3CA6NKF2 412 aa27.68■■■□□ 2.02
NOTCH3-205ENST00000600841 PPRC1Q5VV67 1664 aaKnown RBP27.68■■■□□ 2.02
NOTCH3-205ENST00000600841 KDM6BO15054 1643 aa27.67■■■□□ 2.02
NOTCH3-205ENST00000600841 ATP10BO94823 1461 aa27.66■■■□□ 2.02
NOTCH3-205ENST00000600841 KCNH8Q96L42 1107 aa27.63■■■□□ 2.01
NOTCH3-205ENST00000600841 NUP153P49790 1475 aaKnown RBP27.59■■■□□ 2.01
NOTCH3-205ENST00000600841 TEX14Q8IWB6 1497 aa27.59■■■□□ 2.01
NOTCH3-205ENST00000600841 CFAP43Q8NDM7 1665 aa27.56■■■□□ 2
NOTCH3-205ENST00000600841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.56■■■□□ 2
NOTCH3-205ENST00000600841 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
NOTCH3-205ENST00000600841 CD109Q6YHK3 1445 aa27.54■■■□□ 2
NOTCH3-205ENST00000600841 ARHGAP35Q9NRY4 1499 aa27.53■■■□□ 2
NOTCH3-205ENST00000600841 MAGI3Q5TCQ9 1506 aa27.49■■□□□ 1.99
NOTCH3-205ENST00000600841 FMN1Q68DA7 1419 aa27.48■■□□□ 1.99
NOTCH3-205ENST00000600841 ABCA9Q8IUA7 1624 aa27.43■■□□□ 1.98
NOTCH3-205ENST00000600841 COL17A1Q9UMD9 1497 aaPredicted RBP27.43■■□□□ 1.98
NOTCH3-205ENST00000600841 PLEKHD1A6NEE1 506 aa27.42■■□□□ 1.98
NOTCH3-205ENST00000600841 AEBP2Q6ZN18 517 aaPredicted RBP27.39■■□□□ 1.98
NOTCH3-205ENST00000600841 HECW1Q76N89 1606 aa27.38■■□□□ 1.97
NOTCH3-205ENST00000600841 ATP1B4Q9UN42 357 aaPredicted RBP27.38■■□□□ 1.97
NOTCH3-205ENST00000600841 CDK13Q14004 1512 aaKnown RBP27.37■■□□□ 1.97
NOTCH3-205ENST00000600841 CLIP1P30622 1438 aa27.28■■□□□ 1.96
NOTCH3-205ENST00000600841 PHLDB1Q86UU1 1377 aa27.28■■□□□ 1.96
NOTCH3-205ENST00000600841 ARAP3Q8WWN8 1544 aa27.26■■□□□ 1.96
NOTCH3-205ENST00000600841 NEO1Q92859 1461 aa27.25■■□□□ 1.95
NOTCH3-205ENST00000600841 CDK11AQ9UQ88 783 aaPredicted RBP27.25■■□□□ 1.95
NOTCH3-205ENST00000600841 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.25■■□□□ 1.95
NOTCH3-205ENST00000600841 CASKIN1Q8WXD9 1431 aa27.23■■□□□ 1.95
NOTCH3-205ENST00000600841 PCF11O94913 1555 aaKnown RBP27.22■■□□□ 1.95
NOTCH3-205ENST00000600841 TTC37Q6PGP7 1564 aa27.22■■□□□ 1.95
NOTCH3-205ENST00000600841 LRRIQ1Q96JM4 1722 aa27.21■■□□□ 1.95
NOTCH3-205ENST00000600841 CCDC18Q5T9S5 1454 aa27.16■■□□□ 1.94
NOTCH3-205ENST00000600841 CFAP74Q9C0B2 1584 aa27.15■■□□□ 1.94
NOTCH3-205ENST00000600841 FYCO1Q9BQS8 1478 aa27.15■■□□□ 1.94
NOTCH3-205ENST00000600841 KDM4FA0A1W2PPD8 638 aa27.15■■□□□ 1.94
NOTCH3-205ENST00000600841 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
NOTCH3-205ENST00000600841 FANCAO15360 1455 aa27.14■■□□□ 1.94
NOTCH3-205ENST00000600841 KIF14Q15058 1648 aa27.12■■□□□ 1.93
NOTCH3-205ENST00000600841 RAPGEF3O95398 923 aa27.12■■□□□ 1.93
NOTCH3-205ENST00000600841 AKNAQ7Z591 1439 aa27.11■■□□□ 1.93
NOTCH3-205ENST00000600841 PLCH2O75038 1416 aa27.08■■□□□ 1.93
NOTCH3-205ENST00000600841 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
NOTCH3-205ENST00000600841 ADGRL1O94910 1474 aa27.08■■□□□ 1.93
NOTCH3-205ENST00000600841 MYO5CQ9NQX4 1742 aa27.08■■□□□ 1.93
NOTCH3-205ENST00000600841 DENND4BO75064 1496 aaPredicted RBP27.06■■□□□ 1.92
NOTCH3-205ENST00000600841 FRMPD1Q5SYB0 1578 aa27.06■■□□□ 1.92
NOTCH3-205ENST00000600841 RICTORQ6R327 1708 aa27.02■■□□□ 1.92
NOTCH3-205ENST00000600841 EFCAB2Q5VUJ9 269 aa27.01■■□□□ 1.91
NOTCH3-205ENST00000600841 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
NOTCH3-205ENST00000600841 ARHGAP5Q13017 1502 aa26.96■■□□□ 1.91
NOTCH3-205ENST00000600841 SCAPERQ9BY12 1400 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms