RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CHIC1Q5VXU3 224 aa19.72■□□□□ 0.75
CHMP2A-207ENST00000600804 ADCY10Q96PN6 1610 aa19.7■□□□□ 0.74
CHMP2A-207ENST00000600804 DIP2BQ9P265 1576 aa19.67■□□□□ 0.74
CHMP2A-207ENST00000600804 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
CHMP2A-207ENST00000600804 MAPKBP1O60336 1514 aa19.65■□□□□ 0.74
CHMP2A-207ENST00000600804 ABCC10Q5T3U5 1492 aa19.63■□□□□ 0.73
CHMP2A-207ENST00000600804 TSPOAP1O95153 1857 aa19.62■□□□□ 0.73
CHMP2A-207ENST00000600804 CUL7Q14999 1698 aa19.59■□□□□ 0.73
CHMP2A-207ENST00000600804 KIAA0586Q9BVV6 1533 aa19.55■□□□□ 0.72
CHMP2A-207ENST00000600804 KDM6BO15054 1643 aa19.52■□□□□ 0.72
CHMP2A-207ENST00000600804 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.72
CHMP2A-207ENST00000600804 IGF1RP08069 1367 aa19.52■□□□□ 0.72
CHMP2A-207ENST00000600804 KIF27Q86VH2 1401 aa19.5■□□□□ 0.71
CHMP2A-207ENST00000600804 PPRC1Q5VV67 1664 aaKnown RBP19.49■□□□□ 0.71
CHMP2A-207ENST00000600804 EEA1Q15075 1411 aa19.44■□□□□ 0.7
CHMP2A-207ENST00000600804 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
CHMP2A-207ENST00000600804 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
CHMP2A-207ENST00000600804 KDM4FA0A1W2PPD8 638 aa19.37■□□□□ 0.69
CHMP2A-207ENST00000600804 ABCC2Q92887 1545 aa19.36■□□□□ 0.69
CHMP2A-207ENST00000600804 GLI2P10070 1586 aa19.36■□□□□ 0.69
CHMP2A-207ENST00000600804 PTPRGP23470 1445 aa19.35■□□□□ 0.69
CHMP2A-207ENST00000600804 CARMIL1Q5VZK9 1371 aa19.35■□□□□ 0.69
CHMP2A-207ENST00000600804 DISP1Q96F81 1524 aa19.34■□□□□ 0.69
CHMP2A-207ENST00000600804 TNIKQ9UKE5 1360 aa19.32■□□□□ 0.68
CHMP2A-207ENST00000600804 MAP3K4Q9Y6R4 1608 aa19.31■□□□□ 0.68
CHMP2A-207ENST00000600804 ASXL2Q76L83 1435 aa19.31■□□□□ 0.68
CHMP2A-207ENST00000600804 TTBK1Q5TCY1 1321 aaPredicted RBP19.3■□□□□ 0.68
CHMP2A-207ENST00000600804 UHRF1BP1LA0JNW5 1464 aa19.3■□□□□ 0.68
CHMP2A-207ENST00000600804 ZCCHC11Q5TAX3 1644 aaKnown RBP19.3■□□□□ 0.68
CHMP2A-207ENST00000600804 CSRNP3Q8WYN3 585 aa19.28■□□□□ 0.68
CHMP2A-207ENST00000600804 CARMIL2Q6F5E8 1435 aa19.27■□□□□ 0.68
CHMP2A-207ENST00000600804 KIAA0556O60303 1618 aa19.26■□□□□ 0.67
CHMP2A-207ENST00000600804 PLB1Q6P1J6 1458 aa19.26■□□□□ 0.67
CHMP2A-207ENST00000600804 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
CHMP2A-207ENST00000600804 PRXQ9BXM0 1461 aa19.25■□□□□ 0.67
CHMP2A-207ENST00000600804 COL17A1Q9UMD9 1497 aaPredicted RBP19.25■□□□□ 0.67
CHMP2A-207ENST00000600804 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
CHMP2A-207ENST00000600804 CTTNBP2Q8WZ74 1663 aa19.24■□□□□ 0.67
CHMP2A-207ENST00000600804 UACAQ9BZF9 1416 aa19.24■□□□□ 0.67
CHMP2A-207ENST00000600804 EPRSP07814 1512 aaKnown RBP19.22■□□□□ 0.67
CHMP2A-207ENST00000600804 ADGRL1O94910 1474 aa19.19■□□□□ 0.66
CHMP2A-207ENST00000600804 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
CHMP2A-207ENST00000600804 KIF21BO75037 1637 aa19.18■□□□□ 0.66
CHMP2A-207ENST00000600804 FAM9AQ8IZU1 332 aaPredicted RBP19.15■□□□□ 0.66
CHMP2A-207ENST00000600804 CFAP43Q8NDM7 1665 aa19.11■□□□□ 0.65
CHMP2A-207ENST00000600804 ABCA8O94911 1581 aa19.1■□□□□ 0.65
CHMP2A-207ENST00000600804 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
CHMP2A-207ENST00000600804 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
CHMP2A-207ENST00000600804 GOLGA3Q08378 1498 aa19.07■□□□□ 0.64
CHMP2A-207ENST00000600804 HECW2Q9P2P5 1572 aa19.06■□□□□ 0.64
CHMP2A-207ENST00000600804 MAGI3Q5TCQ9 1506 aa19■□□□□ 0.63
CHMP2A-207ENST00000600804 ILDR1Q86SU0 546 aaPredicted RBP19■□□□□ 0.63
CHMP2A-207ENST00000600804 CD109Q6YHK3 1445 aa18.95■□□□□ 0.62
CHMP2A-207ENST00000600804 SAMD9Q5K651 1589 aa18.9■□□□□ 0.62
CHMP2A-207ENST00000600804 ABCA9Q8IUA7 1624 aa18.9■□□□□ 0.62
CHMP2A-207ENST00000600804 UBTFP17480 764 aaKnown RBP18.9■□□□□ 0.62
CHMP2A-207ENST00000600804 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
CHMP2A-207ENST00000600804 ATP10BO94823 1461 aa18.87■□□□□ 0.61
CHMP2A-207ENST00000600804 ARAP3Q8WWN8 1544 aa18.87■□□□□ 0.61
CHMP2A-207ENST00000600804 ADAMTSL3P82987 1691 aa18.85■□□□□ 0.61
CHMP2A-207ENST00000600804 LOC105371045A0A1W2PR82 267 aa18.84■□□□□ 0.61
CHMP2A-207ENST00000600804 RAPGEF6Q8TEU7 1601 aa18.84■□□□□ 0.61
CHMP2A-207ENST00000600804 FRMPD1Q5SYB0 1578 aa18.84■□□□□ 0.61
CHMP2A-207ENST00000600804 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
CHMP2A-207ENST00000600804 EFCAB5A4FU69 1503 aa18.79■□□□□ 0.6
CHMP2A-207ENST00000600804 P3H3Q8IVL6 736 aa18.79■□□□□ 0.6
CHMP2A-207ENST00000600804 BCORL1Q5H9F3 1711 aa18.78■□□□□ 0.6
CHMP2A-207ENST00000600804 EHMT2Q96KQ7 1210 aa18.78■□□□□ 0.6
CHMP2A-207ENST00000600804 MADDQ8WXG6 1647 aa18.75■□□□□ 0.59
CHMP2A-207ENST00000600804 RICTORQ6R327 1708 aa18.75■□□□□ 0.59
CHMP2A-207ENST00000600804 NUP153P49790 1475 aaKnown RBP18.74■□□□□ 0.59
CHMP2A-207ENST00000600804 SIGLEC1Q9BZZ2 1709 aa18.74■□□□□ 0.59
CHMP2A-207ENST00000600804 PTPRMP28827 1452 aa18.72■□□□□ 0.59
CHMP2A-207ENST00000600804 CEP162Q5TB80 1403 aa18.72■□□□□ 0.59
CHMP2A-207ENST00000600804 NEO1Q92859 1461 aa18.71■□□□□ 0.59
CHMP2A-207ENST00000600804 CLIP1P30622 1438 aa18.71■□□□□ 0.59
CHMP2A-207ENST00000600804 ARHGAP35Q9NRY4 1499 aa18.71■□□□□ 0.59
CHMP2A-207ENST00000600804 RAPGEF3O95398 923 aa18.69■□□□□ 0.58
CHMP2A-207ENST00000600804 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
CHMP2A-207ENST00000600804 ARHGEF40Q8TER5 1519 aa18.68■□□□□ 0.58
CHMP2A-207ENST00000600804 TTC37Q6PGP7 1564 aa18.67■□□□□ 0.58
CHMP2A-207ENST00000600804 PHLDB1Q86UU1 1377 aa18.67■□□□□ 0.58
CHMP2A-207ENST00000600804 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
CHMP2A-207ENST00000600804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.64■□□□□ 0.57
CHMP2A-207ENST00000600804 PCF11O94913 1555 aaKnown RBP18.63■□□□□ 0.57
CHMP2A-207ENST00000600804 LMTK3Q96Q04 1460 aa18.62■□□□□ 0.57
CHMP2A-207ENST00000600804 CFAP74Q9C0B2 1584 aa18.61■□□□□ 0.57
CHMP2A-207ENST00000600804 FMN1Q68DA7 1419 aa18.59■□□□□ 0.57
CHMP2A-207ENST00000600804 RANGAP1P46060 587 aaPredicted RBP18.59■□□□□ 0.57
CHMP2A-207ENST00000600804 ZMYM4Q5VZL5 1548 aa18.59■□□□□ 0.57
CHMP2A-207ENST00000600804 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
CHMP2A-207ENST00000600804 FER1L4A9Z1Z3 1794 aa18.56■□□□□ 0.56
CHMP2A-207ENST00000600804 CDK13Q14004 1512 aaKnown RBP18.56■□□□□ 0.56
CHMP2A-207ENST00000600804 DENND4BO75064 1496 aaPredicted RBP18.56■□□□□ 0.56
CHMP2A-207ENST00000600804 FANCAO15360 1455 aa18.55■□□□□ 0.56
CHMP2A-207ENST00000600804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
CHMP2A-207ENST00000600804 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
CHMP2A-207ENST00000600804 LRRIQ1Q96JM4 1722 aa18.54■□□□□ 0.56
CHMP2A-207ENST00000600804 HECW1Q76N89 1606 aa18.54■□□□□ 0.56
CHMP2A-207ENST00000600804 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms