RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 CEP170Q5SW79 1584 aa27.56■■■□□ 2
USHBP1-210ENST00000600286 CUL7Q14999 1698 aa27.53■■■□□ 2
USHBP1-210ENST00000600286 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
USHBP1-210ENST00000600286 ERCC6L2Q5T890 1561 aa27.48■■□□□ 1.99
USHBP1-210ENST00000600286 RAPGEF2Q9Y4G8 1499 aa27.44■■□□□ 1.98
USHBP1-210ENST00000600286 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
USHBP1-210ENST00000600286 TRHP20396 242 aaPredicted RBP27.23■■□□□ 1.95
USHBP1-210ENST00000600286 KIAA0586Q9BVV6 1533 aa27.22■■□□□ 1.95
USHBP1-210ENST00000600286 UBTFP17480 764 aaKnown RBP27.22■■□□□ 1.95
USHBP1-210ENST00000600286 EHMT2Q96KQ7 1210 aa27.22■■□□□ 1.95
USHBP1-210ENST00000600286 JPH4Q96JJ6 628 aa27.2■■□□□ 1.94
USHBP1-210ENST00000600286 KIF21BO75037 1637 aa27.19■■□□□ 1.94
USHBP1-210ENST00000600286 GOLGA3Q08378 1498 aa27.17■■□□□ 1.94
USHBP1-210ENST00000600286 PRG4Q92954 1404 aaPredicted RBP27.16■■□□□ 1.94
USHBP1-210ENST00000600286 IQGAP2Q13576 1575 aa27.07■■□□□ 1.92
USHBP1-210ENST00000600286 KIF13AQ9H1H9 1805 aa27.02■■□□□ 1.92
USHBP1-210ENST00000600286 CARMIL2Q6F5E8 1435 aa27.02■■□□□ 1.92
USHBP1-210ENST00000600286 CTTNBP2Q8WZ74 1663 aa27■■□□□ 1.91
USHBP1-210ENST00000600286 RANGAP1P46060 587 aaPredicted RBP26.98■■□□□ 1.91
USHBP1-210ENST00000600286 ADCY10Q96PN6 1610 aa26.97■■□□□ 1.91
USHBP1-210ENST00000600286 UGGT2Q9NYU1 1516 aa26.94■■□□□ 1.9
USHBP1-210ENST00000600286 LOC105371045A0A1W2PR82 267 aa26.93■■□□□ 1.9
USHBP1-210ENST00000600286 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
USHBP1-210ENST00000600286 MAPKBP1O60336 1514 aa26.9■■□□□ 1.9
USHBP1-210ENST00000600286 TTBK1Q5TCY1 1321 aaPredicted RBP26.86■■□□□ 1.89
USHBP1-210ENST00000600286 P3H3Q8IVL6 736 aa26.84■■□□□ 1.89
USHBP1-210ENST00000600286 PTPRGP23470 1445 aa26.82■■□□□ 1.88
USHBP1-210ENST00000600286 DISP1Q96F81 1524 aa26.82■■□□□ 1.88
USHBP1-210ENST00000600286 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
USHBP1-210ENST00000600286 DIP2BQ9P265 1576 aa26.79■■□□□ 1.88
USHBP1-210ENST00000600286 KIAA0556O60303 1618 aa26.77■■□□□ 1.88
USHBP1-210ENST00000600286 EFCAB5A4FU69 1503 aa26.75■■□□□ 1.87
USHBP1-210ENST00000600286 CLIP1P30622 1438 aa26.72■■□□□ 1.87
USHBP1-210ENST00000600286 SAMD9Q5K651 1589 aa26.7■■□□□ 1.86
USHBP1-210ENST00000600286 UHRF1BP1LA0JNW5 1464 aa26.68■■□□□ 1.86
USHBP1-210ENST00000600286 NPM1P06748 294 aaKnown RBP eCLIP26.67■■□□□ 1.86
USHBP1-210ENST00000600286 ABCC2Q92887 1545 aa26.66■■□□□ 1.86
USHBP1-210ENST00000600286 FHOD3Q2V2M9 1422 aa26.65■■□□□ 1.86
USHBP1-210ENST00000600286 CEP162Q5TB80 1403 aa26.65■■□□□ 1.86
USHBP1-210ENST00000600286 ARHGAP35Q9NRY4 1499 aa26.64■■□□□ 1.86
USHBP1-210ENST00000600286 FAM69CQ0P6D2 419 aa26.62■■□□□ 1.85
USHBP1-210ENST00000600286 UACAQ9BZF9 1416 aa26.62■■□□□ 1.85
USHBP1-210ENST00000600286 FMN1Q68DA7 1419 aa26.59■■□□□ 1.85
USHBP1-210ENST00000600286 KDM5BQ9UGL1 1544 aa26.55■■□□□ 1.84
USHBP1-210ENST00000600286 TSPOAP1O95153 1857 aa26.55■■□□□ 1.84
USHBP1-210ENST00000600286 ATP1B4Q9UN42 357 aaPredicted RBP26.54■■□□□ 1.84
USHBP1-210ENST00000600286 GLI2P10070 1586 aa26.54■■□□□ 1.84
USHBP1-210ENST00000600286 PPRC1Q5VV67 1664 aaKnown RBP26.53■■□□□ 1.84
USHBP1-210ENST00000600286 ASXL2Q76L83 1435 aa26.52■■□□□ 1.84
USHBP1-210ENST00000600286 PLB1Q6P1J6 1458 aa26.51■■□□□ 1.83
USHBP1-210ENST00000600286 ZCCHC11Q5TAX3 1644 aaKnown RBP26.5■■□□□ 1.83
USHBP1-210ENST00000600286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.46■■□□□ 1.83
USHBP1-210ENST00000600286 HNRNPUL2Q1KMD3 747 aaKnown RBP26.46■■□□□ 1.83
USHBP1-210ENST00000600286 ABCA8O94911 1581 aa26.46■■□□□ 1.83
USHBP1-210ENST00000600286 KDM6BO15054 1643 aa26.43■■□□□ 1.82
USHBP1-210ENST00000600286 RAPGEF6Q8TEU7 1601 aa26.42■■□□□ 1.82
USHBP1-210ENST00000600286 MAP3K4Q9Y6R4 1608 aa26.42■■□□□ 1.82
USHBP1-210ENST00000600286 EPRSP07814 1512 aaKnown RBP26.4■■□□□ 1.82
USHBP1-210ENST00000600286 ARID3CA6NKF2 412 aa26.4■■□□□ 1.82
USHBP1-210ENST00000600286 CASKIN1Q8WXD9 1431 aa26.37■■□□□ 1.81
USHBP1-210ENST00000600286 CDK11AQ9UQ88 783 aaPredicted RBP26.35■■□□□ 1.81
USHBP1-210ENST00000600286 HECW1Q76N89 1606 aa26.32■■□□□ 1.8
USHBP1-210ENST00000600286 NUP153P49790 1475 aaKnown RBP26.32■■□□□ 1.8
USHBP1-210ENST00000600286 VPS8Q8N3P4 1428 aa26.31■■□□□ 1.8
USHBP1-210ENST00000600286 ATP10BO94823 1461 aa26.31■■□□□ 1.8
USHBP1-210ENST00000600286 PLEKHD1A6NEE1 506 aa26.31■■□□□ 1.8
USHBP1-210ENST00000600286 FYCO1Q9BQS8 1478 aa26.3■■□□□ 1.8
USHBP1-210ENST00000600286 WDR7Q9Y4E6 1490 aa26.3■■□□□ 1.8
USHBP1-210ENST00000600286 APLP2Q06481 763 aa26.29■■□□□ 1.8
USHBP1-210ENST00000600286 CCDC18Q5T9S5 1454 aa26.24■■□□□ 1.79
USHBP1-210ENST00000600286 COL17A1Q9UMD9 1497 aaPredicted RBP26.24■■□□□ 1.79
USHBP1-210ENST00000600286 AEBP2Q6ZN18 517 aaPredicted RBP26.24■■□□□ 1.79
USHBP1-210ENST00000600286 PCF11O94913 1555 aaKnown RBP26.24■■□□□ 1.79
USHBP1-210ENST00000600286 KCNH8Q96L42 1107 aa26.22■■□□□ 1.79
USHBP1-210ENST00000600286 CFAP43Q8NDM7 1665 aa26.21■■□□□ 1.79
USHBP1-210ENST00000600286 TEX14Q8IWB6 1497 aa26.17■■□□□ 1.78
USHBP1-210ENST00000600286 CDK13Q14004 1512 aaKnown RBP26.17■■□□□ 1.78
USHBP1-210ENST00000600286 MAGI3Q5TCQ9 1506 aa26.14■■□□□ 1.78
USHBP1-210ENST00000600286 KDM4FA0A1W2PPD8 638 aa26.11■■□□□ 1.77
USHBP1-210ENST00000600286 MTUS2Q5JR59 1369 aa26.08■■□□□ 1.77
USHBP1-210ENST00000600286 CD109Q6YHK3 1445 aa26.07■■□□□ 1.76
USHBP1-210ENST00000600286 TROQ12816 1431 aaPredicted RBP26.06■■□□□ 1.76
USHBP1-210ENST00000600286 ABCA9Q8IUA7 1624 aa26.05■■□□□ 1.76
USHBP1-210ENST00000600286 MAP3K1Q13233 1512 aa26.02■■□□□ 1.76
USHBP1-210ENST00000600286 LRRIQ1Q96JM4 1722 aa26■■□□□ 1.75
USHBP1-210ENST00000600286 TIAM1Q13009 1591 aa25.99■■□□□ 1.75
USHBP1-210ENST00000600286 ARAP3Q8WWN8 1544 aa25.95■■□□□ 1.74
USHBP1-210ENST00000600286 KIF14Q15058 1648 aa25.92■■□□□ 1.74
USHBP1-210ENST00000600286 ADGRL1O94910 1474 aa25.92■■□□□ 1.74
USHBP1-210ENST00000600286 EHBP1L1Q8N3D4 1523 aa25.92■■□□□ 1.74
USHBP1-210ENST00000600286 LRRC9Q6ZRR7 1453 aa25.91■■□□□ 1.74
USHBP1-210ENST00000600286 KANK4Q5T7N3 995 aaPredicted RBP25.91■■□□□ 1.74
USHBP1-210ENST00000600286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.87■■□□□ 1.73
USHBP1-210ENST00000600286 CCNB3Q8WWL7 1395 aa25.86■■□□□ 1.73
USHBP1-210ENST00000600286 EFCAB2Q5VUJ9 269 aa25.84■■□□□ 1.73
USHBP1-210ENST00000600286 PHLDB1Q86UU1 1377 aa25.82■■□□□ 1.72
USHBP1-210ENST00000600286 NEO1Q92859 1461 aa25.82■■□□□ 1.72
USHBP1-210ENST00000600286 FRMPD1Q5SYB0 1578 aa25.82■■□□□ 1.72
USHBP1-210ENST00000600286 PLCH2O75038 1416 aa25.81■■□□□ 1.72
USHBP1-210ENST00000600286 SUPT6HQ7KZ85 1726 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms