RNA–Protein interactions for RNA: ENST00000599255.5

EMP3-208, Transcript of epithelial membrane protein 3, humanhuman

TSL 3

Gene EMP3, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3-208ENST00000599255 SNAPC4Q5SXM2 1469 aa22.31■■□□□ 1.16
EMP3-208ENST00000599255 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
EMP3-208ENST00000599255 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
EMP3-208ENST00000599255 PCGF6Q9BYE7 350 aa22.23■■□□□ 1.15
EMP3-208ENST00000599255 SYNJ2O15056 1496 aa22.22■■□□□ 1.15
EMP3-208ENST00000599255 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
EMP3-208ENST00000599255 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
EMP3-208ENST00000599255 IQGAP2Q13576 1575 aa22.18■■□□□ 1.14
EMP3-208ENST00000599255 APLP2Q06481 763 aa22.15■■□□□ 1.14
EMP3-208ENST00000599255 KIAA0586Q9BVV6 1533 aa22.12■■□□□ 1.13
EMP3-208ENST00000599255 PPARGC1BQ86YN6 1023 aaKnown RBP22.11■■□□□ 1.13
EMP3-208ENST00000599255 UGGT2Q9NYU1 1516 aa22.1■■□□□ 1.13
EMP3-208ENST00000599255 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
EMP3-208ENST00000599255 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
EMP3-208ENST00000599255 FHOD3Q2V2M9 1422 aa22.08■■□□□ 1.13
EMP3-208ENST00000599255 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
EMP3-208ENST00000599255 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
EMP3-208ENST00000599255 NUP160Q12769 1436 aa22.06■■□□□ 1.12
EMP3-208ENST00000599255 PCF11O94913 1555 aaKnown RBP22.04■■□□□ 1.12
EMP3-208ENST00000599255 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
EMP3-208ENST00000599255 CASKIN1Q8WXD9 1431 aa22.03■■□□□ 1.12
EMP3-208ENST00000599255 P3H3Q8IVL6 736 aa22.02■■□□□ 1.12
EMP3-208ENST00000599255 TIAM1Q13009 1591 aa22■■□□□ 1.11
EMP3-208ENST00000599255 CFAP43Q8NDM7 1665 aa21.99■■□□□ 1.11
EMP3-208ENST00000599255 CHD1O14646 1710 aa21.97■■□□□ 1.11
EMP3-208ENST00000599255 KIAA0556O60303 1618 aa21.96■■□□□ 1.11
EMP3-208ENST00000599255 FBLN2P98095 1184 aa21.96■■□□□ 1.11
EMP3-208ENST00000599255 DISP1Q96F81 1524 aa21.93■■□□□ 1.1
EMP3-208ENST00000599255 TTBK1Q5TCY1 1321 aaPredicted RBP21.91■■□□□ 1.1
EMP3-208ENST00000599255 KANK4Q5T7N3 995 aaPredicted RBP21.89■■□□□ 1.09
EMP3-208ENST00000599255 LRRC9Q6ZRR7 1453 aa21.88■■□□□ 1.09
EMP3-208ENST00000599255 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
EMP3-208ENST00000599255 LRRIQ1Q96JM4 1722 aa21.84■■□□□ 1.09
EMP3-208ENST00000599255 CARMIL2Q6F5E8 1435 aa21.84■■□□□ 1.09
EMP3-208ENST00000599255 JPH4Q96JJ6 628 aa21.83■■□□□ 1.09
EMP3-208ENST00000599255 CCDC18Q5T9S5 1454 aa21.83■■□□□ 1.08
EMP3-208ENST00000599255 ATP1B4Q9UN42 357 aaPredicted RBP21.8■■□□□ 1.08
EMP3-208ENST00000599255 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
EMP3-208ENST00000599255 RAPGEF6Q8TEU7 1601 aa21.76■■□□□ 1.07
EMP3-208ENST00000599255 RRBP1Q9P2E9 1410 aaKnown RBP21.75■■□□□ 1.07
EMP3-208ENST00000599255 EPRSP07814 1512 aaKnown RBP21.73■■□□□ 1.07
EMP3-208ENST00000599255 CLASP1Q7Z460 1538 aa21.73■■□□□ 1.07
EMP3-208ENST00000599255 EHBP1L1Q8N3D4 1523 aa21.72■■□□□ 1.07
EMP3-208ENST00000599255 PRG4Q92954 1404 aaPredicted RBP21.7■■□□□ 1.06
EMP3-208ENST00000599255 MTUS2Q5JR59 1369 aa21.67■■□□□ 1.06
EMP3-208ENST00000599255 HRCP23327 699 aa21.67■■□□□ 1.06
EMP3-208ENST00000599255 SUPT6HQ7KZ85 1726 aaKnown RBP21.66■■□□□ 1.06
EMP3-208ENST00000599255 NUP153P49790 1475 aaKnown RBP21.66■■□□□ 1.06
EMP3-208ENST00000599255 CCNB3Q8WWL7 1395 aa21.65■■□□□ 1.06
EMP3-208ENST00000599255 ABCA8O94911 1581 aa21.65■■□□□ 1.06
EMP3-208ENST00000599255 PHLDB1Q86UU1 1377 aa21.62■■□□□ 1.05
EMP3-208ENST00000599255 CDK13Q14004 1512 aaKnown RBP21.62■■□□□ 1.05
EMP3-208ENST00000599255 MAGI3Q5TCQ9 1506 aa21.62■■□□□ 1.05
EMP3-208ENST00000599255 PLB1Q6P1J6 1458 aa21.61■■□□□ 1.05
EMP3-208ENST00000599255 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
EMP3-208ENST00000599255 NCOA2Q15596 1464 aa21.58■■□□□ 1.05
EMP3-208ENST00000599255 PTPRGP23470 1445 aa21.58■■□□□ 1.05
EMP3-208ENST00000599255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.042e-6■□□□□ 8.8
EMP3-208ENST00000599255 CDK11AQ9UQ88 783 aaPredicted RBP21.54■■□□□ 1.04
EMP3-208ENST00000599255 HNRNPUL2Q1KMD3 747 aaKnown RBP21.53■■□□□ 1.04
EMP3-208ENST00000599255 MYOM3Q5VTT5 1437 aa21.52■■□□□ 1.04
EMP3-208ENST00000599255 ERCC6L2Q5T890 1561 aa21.52■■□□□ 1.04
EMP3-208ENST00000599255 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
EMP3-208ENST00000599255 FGD6Q6ZV73 1430 aa21.51■■□□□ 1.03
EMP3-208ENST00000599255 ADCY10Q96PN6 1610 aa21.49■■□□□ 1.03
EMP3-208ENST00000599255 UACAQ9BZF9 1416 aa21.48■■□□□ 1.03
EMP3-208ENST00000599255 TROQ12816 1431 aaPredicted RBP21.47■■□□□ 1.03
EMP3-208ENST00000599255 ATP10BO94823 1461 aa21.46■■□□□ 1.03
EMP3-208ENST00000599255 ABCC2Q92887 1545 aa21.45■■□□□ 1.02
EMP3-208ENST00000599255 ARID3CA6NKF2 412 aa21.44■■□□□ 1.02
EMP3-208ENST00000599255 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
EMP3-208ENST00000599255 OSCARQ8IYS5 282 aa21.43■■□□□ 1.02
EMP3-208ENST00000599255 MIA2Q96PC5 1412 aa21.43■■□□□ 1.02
EMP3-208ENST00000599255 PTPN23Q9H3S7 1636 aa21.43■■□□□ 1.02
EMP3-208ENST00000599255 UHRF1BP1LA0JNW5 1464 aa21.42■■□□□ 1.02
EMP3-208ENST00000599255 TCOF1Q13428 1488 aaKnown RBP21.42■■□□□ 1.02
EMP3-208ENST00000599255 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
EMP3-208ENST00000599255 ITSN2Q9NZM3 1697 aa21.38■■□□□ 1.01
EMP3-208ENST00000599255 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
EMP3-208ENST00000599255 PLEKHD1A6NEE1 506 aa21.37■■□□□ 1.01
EMP3-208ENST00000599255 KIF14Q15058 1648 aa21.37■■□□□ 1.01
EMP3-208ENST00000599255 ITGAEP38570 1179 aa21.31■■□□□ 1
EMP3-208ENST00000599255 KDM5BQ9UGL1 1544 aa21.3■■□□□ 1
EMP3-208ENST00000599255 ZCCHC11Q5TAX3 1644 aaKnown RBP21.29■■□□□ 1
EMP3-208ENST00000599255 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
EMP3-208ENST00000599255 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
EMP3-208ENST00000599255 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
EMP3-208ENST00000599255 CDC42BPAQ5VT25 1732 aa21.26■□□□□ 0.99
EMP3-208ENST00000599255 RAB3GAP2Q9H2M9 1393 aa21.23■□□□□ 0.99
EMP3-208ENST00000599255 DNMT1P26358 1616 aaKnown RBP21.22■□□□□ 0.99
EMP3-208ENST00000599255 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
EMP3-208ENST00000599255 CLSPNQ9HAW4 1339 aa21.2■□□□□ 0.98
EMP3-208ENST00000599255 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
EMP3-208ENST00000599255 AKNAQ7Z591 1439 aa21.2■□□□□ 0.98
EMP3-208ENST00000599255 CAMSAP2Q08AD1 1489 aa21.2■□□□□ 0.98
EMP3-208ENST00000599255 CFDP1Q9UEE9 299 aaPredicted RBP21.19■□□□□ 0.98
EMP3-208ENST00000599255 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
EMP3-208ENST00000599255 PREX2Q70Z35 1606 aa21.18■□□□□ 0.98
EMP3-208ENST00000599255 GCC2Q8IWJ2 1684 aa21.17■□□□□ 0.98
EMP3-208ENST00000599255 DAPK1P53355 1430 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms