RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
GRAMD1A-209ENST00000598580 KIAA0586Q9BVV6 1533 aa19.38■□□□□ 0.69
GRAMD1A-209ENST00000598580 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
GRAMD1A-209ENST00000598580 KIF13AQ9H1H9 1805 aa19.32■□□□□ 0.68
GRAMD1A-209ENST00000598580 FAM69CQ0P6D2 419 aa19.32■□□□□ 0.68
GRAMD1A-209ENST00000598580 ADCY10Q96PN6 1610 aa19.3■□□□□ 0.68
GRAMD1A-209ENST00000598580 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
GRAMD1A-209ENST00000598580 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
GRAMD1A-209ENST00000598580 NPM1P06748 294 aaKnown RBP eCLIP19.27■□□□□ 0.68
GRAMD1A-209ENST00000598580 CUL7Q14999 1698 aa19.27■□□□□ 0.67
GRAMD1A-209ENST00000598580 MAPKBP1O60336 1514 aa19.25■□□□□ 0.67
GRAMD1A-209ENST00000598580 PTPRGP23470 1445 aa19.24■□□□□ 0.67
GRAMD1A-209ENST00000598580 TTBK1Q5TCY1 1321 aaPredicted RBP19.24■□□□□ 0.67
GRAMD1A-209ENST00000598580 DIP2BQ9P265 1576 aa19.2■□□□□ 0.66
GRAMD1A-209ENST00000598580 TNIKQ9UKE5 1360 aa19.18■□□□□ 0.66
GRAMD1A-209ENST00000598580 DISP1Q96F81 1524 aa19.15■□□□□ 0.66
GRAMD1A-209ENST00000598580 IQGAP2Q13576 1575 aa19.12■□□□□ 0.65
GRAMD1A-209ENST00000598580 CARMIL2Q6F5E8 1435 aa19.12■□□□□ 0.65
GRAMD1A-209ENST00000598580 ABCC2Q92887 1545 aa19.1■□□□□ 0.65
GRAMD1A-209ENST00000598580 RAPGEF2Q9Y4G8 1499 aa19.09■□□□□ 0.65
GRAMD1A-209ENST00000598580 ASXL2Q76L83 1435 aa19.08■□□□□ 0.65
GRAMD1A-209ENST00000598580 UACAQ9BZF9 1416 aa19.08■□□□□ 0.64
GRAMD1A-209ENST00000598580 UHRF1BP1LA0JNW5 1464 aa19.07■□□□□ 0.64
GRAMD1A-209ENST00000598580 KDM4FA0A1W2PPD8 638 aa19.05■□□□□ 0.64
GRAMD1A-209ENST00000598580 UGGT2Q9NYU1 1516 aa19.05■□□□□ 0.64
GRAMD1A-209ENST00000598580 TSPOAP1O95153 1857 aa19.03■□□□□ 0.64
GRAMD1A-209ENST00000598580 PLB1Q6P1J6 1458 aa19.02■□□□□ 0.63
GRAMD1A-209ENST00000598580 KDM6BO15054 1643 aa19■□□□□ 0.63
GRAMD1A-209ENST00000598580 KDM5BQ9UGL1 1544 aa19■□□□□ 0.63
GRAMD1A-209ENST00000598580 COL17A1Q9UMD9 1497 aaPredicted RBP18.98■□□□□ 0.63
GRAMD1A-209ENST00000598580 GLI2P10070 1586 aa18.98■□□□□ 0.63
GRAMD1A-209ENST00000598580 PPRC1Q5VV67 1664 aaKnown RBP18.97■□□□□ 0.63
GRAMD1A-209ENST00000598580 KIAA0556O60303 1618 aa18.96■□□□□ 0.63
GRAMD1A-209ENST00000598580 EPRSP07814 1512 aaKnown RBP18.96■□□□□ 0.63
GRAMD1A-209ENST00000598580 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
GRAMD1A-209ENST00000598580 ZCCHC11Q5TAX3 1644 aaKnown RBP18.9■□□□□ 0.62
GRAMD1A-209ENST00000598580 MAP3K4Q9Y6R4 1608 aa18.85■□□□□ 0.61
GRAMD1A-209ENST00000598580 ABCA8O94911 1581 aa18.85■□□□□ 0.61
GRAMD1A-209ENST00000598580 WDR7Q9Y4E6 1490 aa18.84■□□□□ 0.61
GRAMD1A-209ENST00000598580 P3H3Q8IVL6 736 aa18.83■□□□□ 0.6
GRAMD1A-209ENST00000598580 KCNH8Q96L42 1107 aa18.83■□□□□ 0.6
GRAMD1A-209ENST00000598580 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
GRAMD1A-209ENST00000598580 CTTNBP2Q8WZ74 1663 aa18.82■□□□□ 0.6
GRAMD1A-209ENST00000598580 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
GRAMD1A-209ENST00000598580 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
GRAMD1A-209ENST00000598580 TEX14Q8IWB6 1497 aa18.77■□□□□ 0.59
GRAMD1A-209ENST00000598580 CD109Q6YHK3 1445 aa18.76■□□□□ 0.59
GRAMD1A-209ENST00000598580 ADGRL1O94910 1474 aa18.76■□□□□ 0.59
GRAMD1A-209ENST00000598580 ATP10BO94823 1461 aa18.74■□□□□ 0.59
GRAMD1A-209ENST00000598580 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
GRAMD1A-209ENST00000598580 RANGAP1P46060 587 aaPredicted RBP18.66■□□□□ 0.58
GRAMD1A-209ENST00000598580 FAM9AQ8IZU1 332 aaPredicted RBP18.66■□□□□ 0.58
GRAMD1A-209ENST00000598580 SAMD9Q5K651 1589 aa18.65■□□□□ 0.58
GRAMD1A-209ENST00000598580 CFAP43Q8NDM7 1665 aa18.65■□□□□ 0.58
GRAMD1A-209ENST00000598580 FHOD3Q2V2M9 1422 aa18.6■□□□□ 0.57
GRAMD1A-209ENST00000598580 ARAP3Q8WWN8 1544 aa18.59■□□□□ 0.57
GRAMD1A-209ENST00000598580 NUP153P49790 1475 aaKnown RBP18.59■□□□□ 0.57
GRAMD1A-209ENST00000598580 RAPGEF3O95398 923 aa18.58■□□□□ 0.56
GRAMD1A-209ENST00000598580 EEA1Q15075 1411 aa18.57■□□□□ 0.56
GRAMD1A-209ENST00000598580 RAPGEF6Q8TEU7 1601 aa18.56■□□□□ 0.56
GRAMD1A-209ENST00000598580 ABCA9Q8IUA7 1624 aa18.56■□□□□ 0.56
GRAMD1A-209ENST00000598580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
GRAMD1A-209ENST00000598580 HNRNPUL2Q1KMD3 747 aaKnown RBP18.55■□□□□ 0.56
GRAMD1A-209ENST00000598580 ILDR1Q86SU0 546 aaPredicted RBP18.5■□□□□ 0.55
GRAMD1A-209ENST00000598580 EHMT2Q96KQ7 1210 aa18.5■□□□□ 0.55
GRAMD1A-209ENST00000598580 PHLDB1Q86UU1 1377 aa18.5■□□□□ 0.55
GRAMD1A-209ENST00000598580 HECW2Q9P2P5 1572 aa18.5■□□□□ 0.55
GRAMD1A-209ENST00000598580 KIF21BO75037 1637 aa18.49■□□□□ 0.55
GRAMD1A-209ENST00000598580 PLEKHD1A6NEE1 506 aa18.48■□□□□ 0.55
GRAMD1A-209ENST00000598580 NEO1Q92859 1461 aa18.47■□□□□ 0.55
GRAMD1A-209ENST00000598580 CHIC1Q5VXU3 224 aa18.46■□□□□ 0.55
GRAMD1A-209ENST00000598580 FRMPD1Q5SYB0 1578 aa18.46■□□□□ 0.55
GRAMD1A-209ENST00000598580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.41■□□□□ 0.54
GRAMD1A-209ENST00000598580 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
GRAMD1A-209ENST00000598580 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
GRAMD1A-209ENST00000598580 EFCAB5A4FU69 1503 aa18.39■□□□□ 0.54
GRAMD1A-209ENST00000598580 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.53
GRAMD1A-209ENST00000598580 PTPRMP28827 1452 aa18.39■□□□□ 0.53
GRAMD1A-209ENST00000598580 ADAMTSL3P82987 1691 aa18.38■□□□□ 0.53
GRAMD1A-209ENST00000598580 FANCAO15360 1455 aa18.36■□□□□ 0.53
GRAMD1A-209ENST00000598580 DENND4BO75064 1496 aaPredicted RBP18.36■□□□□ 0.53
GRAMD1A-209ENST00000598580 TTC37Q6PGP7 1564 aa18.36■□□□□ 0.53
GRAMD1A-209ENST00000598580 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
GRAMD1A-209ENST00000598580 ARID4BQ4LE39 1312 aaPredicted RBP18.34■□□□□ 0.53
GRAMD1A-209ENST00000598580 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
GRAMD1A-209ENST00000598580 ATP1B4Q9UN42 357 aaPredicted RBP18.32■□□□□ 0.52
GRAMD1A-209ENST00000598580 RICTORQ6R327 1708 aa18.31■□□□□ 0.52
GRAMD1A-209ENST00000598580 PLCH2O75038 1416 aa18.31■□□□□ 0.52
GRAMD1A-209ENST00000598580 BCORL1Q5H9F3 1711 aa18.3■□□□□ 0.52
GRAMD1A-209ENST00000598580 MADDQ8WXG6 1647 aa18.29■□□□□ 0.52
GRAMD1A-209ENST00000598580 SIGLEC1Q9BZZ2 1709 aa18.29■□□□□ 0.52
GRAMD1A-209ENST00000598580 SCAPERQ9BY12 1400 aa18.28■□□□□ 0.52
GRAMD1A-209ENST00000598580 ARHGEF40Q8TER5 1519 aa18.28■□□□□ 0.52
GRAMD1A-209ENST00000598580 FMN1Q68DA7 1419 aa18.26■□□□□ 0.51
GRAMD1A-209ENST00000598580 ZMYM4Q5VZL5 1548 aa18.25■□□□□ 0.51
GRAMD1A-209ENST00000598580 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
GRAMD1A-209ENST00000598580 HECW1Q76N89 1606 aa18.23■□□□□ 0.51
GRAMD1A-209ENST00000598580 EFCAB2Q5VUJ9 269 aa18.23■□□□□ 0.51
GRAMD1A-209ENST00000598580 LMTK3Q96Q04 1460 aa18.22■□□□□ 0.51
GRAMD1A-209ENST00000598580 MLECQ14165 292 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms