RNA–Protein interactions for RNA: ENST00000598362.1

GRAMD1A-208, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-208ENST00000598362 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
GRAMD1A-208ENST00000598362 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
GRAMD1A-208ENST00000598362 CUL7Q14999 1698 aa12.73□□□□□ -0.37
GRAMD1A-208ENST00000598362 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
GRAMD1A-208ENST00000598362 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.37
GRAMD1A-208ENST00000598362 PRG4Q92954 1404 aaPredicted RBP12.71□□□□□ -0.37
GRAMD1A-208ENST00000598362 SHROOM2Q13796 1616 aa12.71□□□□□ -0.37
GRAMD1A-208ENST00000598362 CHIC1Q5VXU3 224 aa12.71□□□□□ -0.37
GRAMD1A-208ENST00000598362 RUSC2Q8N2Y8 1516 aa12.7□□□□□ -0.38
GRAMD1A-208ENST00000598362 IGF1RP08069 1367 aa12.68□□□□□ -0.38
GRAMD1A-208ENST00000598362 MAPKBP1O60336 1514 aa12.65□□□□□ -0.38
GRAMD1A-208ENST00000598362 EEA1Q15075 1411 aa12.63□□□□□ -0.39
GRAMD1A-208ENST00000598362 KDM6BO15054 1643 aa12.63□□□□□ -0.39
GRAMD1A-208ENST00000598362 CARMIL1Q5VZK9 1371 aa12.61□□□□□ -0.39
GRAMD1A-208ENST00000598362 DIP2BQ9P265 1576 aa12.6□□□□□ -0.39
GRAMD1A-208ENST00000598362 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
GRAMD1A-208ENST00000598362 PRXQ9BXM0 1461 aa12.58□□□□□ -0.4
GRAMD1A-208ENST00000598362 KIF21BO75037 1637 aa12.53□□□□□ -0.4
GRAMD1A-208ENST00000598362 ADCY10Q96PN6 1610 aa12.53□□□□□ -0.4
GRAMD1A-208ENST00000598362 CSRNP3Q8WYN3 585 aa12.52□□□□□ -0.41
GRAMD1A-208ENST00000598362 TSPOAP1O95153 1857 aa12.52□□□□□ -0.41
GRAMD1A-208ENST00000598362 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
GRAMD1A-208ENST00000598362 KIAA0586Q9BVV6 1533 aa12.51□□□□□ -0.41
GRAMD1A-208ENST00000598362 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
GRAMD1A-208ENST00000598362 ADGRL1O94910 1474 aa12.5□□□□□ -0.41
GRAMD1A-208ENST00000598362 IQGAP2Q13576 1575 aa12.5□□□□□ -0.41
GRAMD1A-208ENST00000598362 PTPRGP23470 1445 aa12.49□□□□□ -0.41
GRAMD1A-208ENST00000598362 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
GRAMD1A-208ENST00000598362 FBXO41Q8TF61 875 aa12.47□□□□□ -0.41
GRAMD1A-208ENST00000598362 GOLGA3Q08378 1498 aa12.45□□□□□ -0.42
GRAMD1A-208ENST00000598362 ASXL2Q76L83 1435 aa12.44□□□□□ -0.42
GRAMD1A-208ENST00000598362 GLI2P10070 1586 aa12.43□□□□□ -0.42
GRAMD1A-208ENST00000598362 HECW2Q9P2P5 1572 aa12.43□□□□□ -0.42
GRAMD1A-208ENST00000598362 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
GRAMD1A-208ENST00000598362 ABCC2Q92887 1545 aa12.43□□□□□ -0.42
GRAMD1A-208ENST00000598362 TNIKQ9UKE5 1360 aa12.43□□□□□ -0.42
GRAMD1A-208ENST00000598362 UGGT2Q9NYU1 1516 aa12.42□□□□□ -0.42
GRAMD1A-208ENST00000598362 CARMIL2Q6F5E8 1435 aa12.42□□□□□ -0.42
GRAMD1A-208ENST00000598362 KIAA0556O60303 1618 aa12.4□□□□□ -0.42
GRAMD1A-208ENST00000598362 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.43
GRAMD1A-208ENST00000598362 COL17A1Q9UMD9 1497 aaPredicted RBP12.4□□□□□ -0.43
GRAMD1A-208ENST00000598362 DISP1Q96F81 1524 aa12.38□□□□□ -0.43
GRAMD1A-208ENST00000598362 UHRF1BP1LA0JNW5 1464 aa12.38□□□□□ -0.43
GRAMD1A-208ENST00000598362 PPRC1Q5VV67 1664 aaKnown RBP12.37□□□□□ -0.43
GRAMD1A-208ENST00000598362 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
GRAMD1A-208ENST00000598362 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
GRAMD1A-208ENST00000598362 EPRSP07814 1512 aaKnown RBP12.34□□□□□ -0.43
GRAMD1A-208ENST00000598362 EHMT2Q96KQ7 1210 aa12.34□□□□□ -0.43
GRAMD1A-208ENST00000598362 EFCAB5A4FU69 1503 aa12.32□□□□□ -0.44
GRAMD1A-208ENST00000598362 KDM5BQ9UGL1 1544 aa12.31□□□□□ -0.44
GRAMD1A-208ENST00000598362 MAP3K4Q9Y6R4 1608 aa12.3□□□□□ -0.44
GRAMD1A-208ENST00000598362 UBTFP17480 764 aaKnown RBP12.3□□□□□ -0.44
GRAMD1A-208ENST00000598362 FHOD3Q2V2M9 1422 aa12.26□□□□□ -0.45
GRAMD1A-208ENST00000598362 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
GRAMD1A-208ENST00000598362 CD109Q6YHK3 1445 aa12.25□□□□□ -0.45
GRAMD1A-208ENST00000598362 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
GRAMD1A-208ENST00000598362 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
GRAMD1A-208ENST00000598362 ABCA8O94911 1581 aa12.23□□□□□ -0.45
GRAMD1A-208ENST00000598362 MAGI3Q5TCQ9 1506 aa12.23□□□□□ -0.45
GRAMD1A-208ENST00000598362 WDR7Q9Y4E6 1490 aa12.23□□□□□ -0.45
GRAMD1A-208ENST00000598362 P3H3Q8IVL6 736 aa12.21□□□□□ -0.45
GRAMD1A-208ENST00000598362 ZCCHC11Q5TAX3 1644 aaKnown RBP12.21□□□□□ -0.46
GRAMD1A-208ENST00000598362 RAPGEF6Q8TEU7 1601 aa12.2□□□□□ -0.46
GRAMD1A-208ENST00000598362 CLIP1P30622 1438 aa12.2□□□□□ -0.46
GRAMD1A-208ENST00000598362 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
GRAMD1A-208ENST00000598362 LMTK3Q96Q04 1460 aa12.19□□□□□ -0.46
GRAMD1A-208ENST00000598362 PTPRMP28827 1452 aa12.18□□□□□ -0.46
GRAMD1A-208ENST00000598362 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
GRAMD1A-208ENST00000598362 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
GRAMD1A-208ENST00000598362 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
GRAMD1A-208ENST00000598362 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
GRAMD1A-208ENST00000598362 FMN1Q68DA7 1419 aa12.16□□□□□ -0.46
GRAMD1A-208ENST00000598362 PCF11O94913 1555 aaKnown RBP12.14□□□□□ -0.47
GRAMD1A-208ENST00000598362 HECW1Q76N89 1606 aa12.14□□□□□ -0.47
GRAMD1A-208ENST00000598362 NUP153P49790 1475 aaKnown RBP12.14□□□□□ -0.47
GRAMD1A-208ENST00000598362 ARID4BQ4LE39 1312 aaPredicted RBP12.13□□□□□ -0.47
GRAMD1A-208ENST00000598362 SOCS7O14512 581 aa12.13□□□□□ -0.47
GRAMD1A-208ENST00000598362 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
GRAMD1A-208ENST00000598362 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
GRAMD1A-208ENST00000598362 RAPGEF3O95398 923 aa12.09□□□□□ -0.47
GRAMD1A-208ENST00000598362 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
GRAMD1A-208ENST00000598362 ATP10BO94823 1461 aa12.08□□□□□ -0.47
GRAMD1A-208ENST00000598362 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.47
GRAMD1A-208ENST00000598362 DISP3Q9P2K9 1392 aa12.07□□□□□ -0.48
GRAMD1A-208ENST00000598362 CDK13Q14004 1512 aaKnown RBP12.07□□□□□ -0.48
GRAMD1A-208ENST00000598362 ARID3CA6NKF2 412 aa12.07□□□□□ -0.48
GRAMD1A-208ENST00000598362 LRRIQ1Q96JM4 1722 aa12.06□□□□□ -0.48
GRAMD1A-208ENST00000598362 ILDR2Q71H61 639 aa12.06□□□□□ -0.48
GRAMD1A-208ENST00000598362 HSPA2P54652 639 aa12.05□□□□□ -0.48
GRAMD1A-208ENST00000598362 CCDC18Q5T9S5 1454 aa12.05□□□□□ -0.48
GRAMD1A-208ENST00000598362 NEO1Q92859 1461 aa12.04□□□□□ -0.48
GRAMD1A-208ENST00000598362 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
GRAMD1A-208ENST00000598362 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
GRAMD1A-208ENST00000598362 DMRT2Q9Y5R5 561 aa12.02□□□□□ -0.49
GRAMD1A-208ENST00000598362 POGZQ7Z3K3 1410 aa12.01□□□□□ -0.49
GRAMD1A-208ENST00000598362 MADDQ8WXG6 1647 aa12□□□□□ -0.49
GRAMD1A-208ENST00000598362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12□□□□□ -0.49
GRAMD1A-208ENST00000598362 HNRNPUL2Q1KMD3 747 aaKnown RBP12□□□□□ -0.49
GRAMD1A-208ENST00000598362 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
GRAMD1A-208ENST00000598362 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms