RNA–Protein interactions for RNA: ENST00000598127.1

PAF1-207, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-207ENST00000598127 JPH4Q96JJ6 628 aa34.94■■■■□ 3.18
PAF1-207ENST00000598127 RAPGEF2Q9Y4G8 1499 aa34.94■■■■□ 3.18
PAF1-207ENST00000598127 KIAA0586Q9BVV6 1533 aa34.93■■■■□ 3.18
PAF1-207ENST00000598127 ERCC6L2Q5T890 1561 aa34.86■■■■□ 3.17
PAF1-207ENST00000598127 EEA1Q15075 1411 aa34.83■■■■□ 3.17
PAF1-207ENST00000598127 CSRNP3Q8WYN3 585 aa34.83■■■■□ 3.17
PAF1-207ENST00000598127 PRG4Q92954 1404 aaPredicted RBP34.82■■■■□ 3.17
PAF1-207ENST00000598127 PRXQ9BXM0 1461 aa34.82■■■■□ 3.16
PAF1-207ENST00000598127 IQGAP2Q13576 1575 aa34.7■■■■□ 3.15
PAF1-207ENST00000598127 FAM9AQ8IZU1 332 aaPredicted RBP34.67■■■■□ 3.14
PAF1-207ENST00000598127 CTTNBP2Q8WZ74 1663 aa34.61■■■■□ 3.13
PAF1-207ENST00000598127 CARMIL2Q6F5E8 1435 aa34.55■■■■□ 3.12
PAF1-207ENST00000598127 UGGT2Q9NYU1 1516 aa34.54■■■■□ 3.12
PAF1-207ENST00000598127 DISP1Q96F81 1524 aa34.46■■■■□ 3.11
PAF1-207ENST00000598127 KIF21BO75037 1637 aa34.46■■■■□ 3.11
PAF1-207ENST00000598127 TNIKQ9UKE5 1360 aa34.44■■■■□ 3.1
PAF1-207ENST00000598127 PTPRGP23470 1445 aa34.42■■■■□ 3.1
PAF1-207ENST00000598127 KIAA0556O60303 1618 aa34.37■■■■□ 3.09
PAF1-207ENST00000598127 GOLGA3Q08378 1498 aa34.35■■■■□ 3.09
PAF1-207ENST00000598127 TTBK1Q5TCY1 1321 aaPredicted RBP34.33■■■■□ 3.09
PAF1-207ENST00000598127 ADCY10Q96PN6 1610 aa34.28■■■■□ 3.08
PAF1-207ENST00000598127 TRHP20396 242 aaPredicted RBP34.26■■■■□ 3.08
PAF1-207ENST00000598127 NPM1P06748 294 aaKnown RBP eCLIP34.25■■■■□ 3.07
PAF1-207ENST00000598127 UBTFP17480 764 aaKnown RBP34.21■■■■□ 3.07
PAF1-207ENST00000598127 EHMT2Q96KQ7 1210 aa34.19■■■■□ 3.06
PAF1-207ENST00000598127 UACAQ9BZF9 1416 aa34.18■■■■□ 3.06
PAF1-207ENST00000598127 UHRF1BP1LA0JNW5 1464 aa34.16■■■■□ 3.06
PAF1-207ENST00000598127 SAMD9Q5K651 1589 aa34.15■■■■□ 3.06
PAF1-207ENST00000598127 P3H3Q8IVL6 736 aa34.13■■■■□ 3.05
PAF1-207ENST00000598127 ABCC2Q92887 1545 aa34.1■■■■□ 3.05
PAF1-207ENST00000598127 RANGAP1P46060 587 aaPredicted RBP34.1■■■■□ 3.05
PAF1-207ENST00000598127 MAPKBP1O60336 1514 aa34.07■■■■□ 3.04
PAF1-207ENST00000598127 PLB1Q6P1J6 1458 aa34.03■■■■□ 3.04
PAF1-207ENST00000598127 ABCA8O94911 1581 aa34.02■■■■□ 3.04
PAF1-207ENST00000598127 EFCAB5A4FU69 1503 aa34■■■■□ 3.03
PAF1-207ENST00000598127 KDM5BQ9UGL1 1544 aa33.99■■■■□ 3.03
PAF1-207ENST00000598127 KIF13AQ9H1H9 1805 aa33.95■■■■□ 3.02
PAF1-207ENST00000598127 FHOD3Q2V2M9 1422 aa33.93■■■■□ 3.02
PAF1-207ENST00000598127 ABCC10Q5T3U5 1492 aa33.93■■■■□ 3.02
PAF1-207ENST00000598127 ZCCHC11Q5TAX3 1644 aaKnown RBP33.91■■■■□ 3.02
PAF1-207ENST00000598127 ASXL2Q76L83 1435 aa33.87■■■■□ 3.01
PAF1-207ENST00000598127 FAM69CQ0P6D2 419 aa33.87■■■■□ 3.01
PAF1-207ENST00000598127 DIP2BQ9P265 1576 aa33.85■■■■□ 3.01
PAF1-207ENST00000598127 RAPGEF6Q8TEU7 1601 aa33.84■■■■□ 3.01
PAF1-207ENST00000598127 ARHGAP35Q9NRY4 1499 aa33.83■■■■□ 3.01
PAF1-207ENST00000598127 ATP10BO94823 1461 aa33.76■■■□□ 2.99
PAF1-207ENST00000598127 ARID3CA6NKF2 412 aa33.71■■■□□ 2.99
PAF1-207ENST00000598127 FMN1Q68DA7 1419 aa33.7■■■□□ 2.99
PAF1-207ENST00000598127 GLI2P10070 1586 aa33.7■■■□□ 2.99
PAF1-207ENST00000598127 NUP153P49790 1475 aaKnown RBP33.69■■■□□ 2.98
PAF1-207ENST00000598127 WDR7Q9Y4E6 1490 aa33.69■■■□□ 2.98
PAF1-207ENST00000598127 EPRSP07814 1512 aaKnown RBP33.68■■■□□ 2.98
PAF1-207ENST00000598127 TSPOAP1O95153 1857 aa33.63■■■□□ 2.97
PAF1-207ENST00000598127 CLIP1P30622 1438 aa33.62■■■□□ 2.97
PAF1-207ENST00000598127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.61■■■□□ 2.97
PAF1-207ENST00000598127 HNRNPUL2Q1KMD3 747 aaKnown RBP33.61■■■□□ 2.97
PAF1-207ENST00000598127 LOC105371045A0A1W2PR82 267 aa33.6■■■□□ 2.97
PAF1-207ENST00000598127 KCNH8Q96L42 1107 aa33.59■■■□□ 2.97
PAF1-207ENST00000598127 MAP3K4Q9Y6R4 1608 aa33.53■■■□□ 2.96
PAF1-207ENST00000598127 ATP1B4Q9UN42 357 aaPredicted RBP33.53■■■□□ 2.96
PAF1-207ENST00000598127 HECW1Q76N89 1606 aa33.52■■■□□ 2.96
PAF1-207ENST00000598127 PLEKHD1A6NEE1 506 aa33.5■■■□□ 2.95
PAF1-207ENST00000598127 PPRC1Q5VV67 1664 aaKnown RBP33.48■■■□□ 2.95
PAF1-207ENST00000598127 CEP162Q5TB80 1403 aa33.47■■■□□ 2.95
PAF1-207ENST00000598127 CFAP43Q8NDM7 1665 aa33.45■■■□□ 2.95
PAF1-207ENST00000598127 CDK13Q14004 1512 aaKnown RBP33.44■■■□□ 2.94
PAF1-207ENST00000598127 CASKIN1Q8WXD9 1431 aa33.44■■■□□ 2.94
PAF1-207ENST00000598127 CD109Q6YHK3 1445 aa33.42■■■□□ 2.94
PAF1-207ENST00000598127 PCF11O94913 1555 aaKnown RBP33.38■■■□□ 2.93
PAF1-207ENST00000598127 LRRIQ1Q96JM4 1722 aa33.38■■■□□ 2.93
PAF1-207ENST00000598127 TEX14Q8IWB6 1497 aa33.37■■■□□ 2.93
PAF1-207ENST00000598127 ABCA9Q8IUA7 1624 aa33.37■■■□□ 2.93
PAF1-207ENST00000598127 CDK11AQ9UQ88 783 aaPredicted RBP33.36■■■□□ 2.93
PAF1-207ENST00000598127 MAGI3Q5TCQ9 1506 aa33.35■■■□□ 2.93
PAF1-207ENST00000598127 FYCO1Q9BQS8 1478 aa33.34■■■□□ 2.93
PAF1-207ENST00000598127 KDM6BO15054 1643 aa33.31■■■□□ 2.92
PAF1-207ENST00000598127 CCDC18Q5T9S5 1454 aa33.3■■■□□ 2.92
PAF1-207ENST00000598127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.22■■■□□ 2.91
PAF1-207ENST00000598127 TROQ12816 1431 aaPredicted RBP33.21■■■□□ 2.91
PAF1-207ENST00000598127 COL17A1Q9UMD9 1497 aaPredicted RBP33.17■■■□□ 2.9
PAF1-207ENST00000598127 TTC37Q6PGP7 1564 aa33.14■■■□□ 2.9
PAF1-207ENST00000598127 PHLDB1Q86UU1 1377 aa33.13■■■□□ 2.89
PAF1-207ENST00000598127 KIF14Q15058 1648 aa33.12■■■□□ 2.89
PAF1-207ENST00000598127 NEO1Q92859 1461 aa33.1■■■□□ 2.89
PAF1-207ENST00000598127 VPS8Q8N3P4 1428 aa33.08■■■□□ 2.89
PAF1-207ENST00000598127 ARAP3Q8WWN8 1544 aa33.07■■■□□ 2.89
PAF1-207ENST00000598127 PLCH2O75038 1416 aa33.05■■■□□ 2.88
PAF1-207ENST00000598127 MYO5CQ9NQX4 1742 aa33.03■■■□□ 2.88
PAF1-207ENST00000598127 FANCAO15360 1455 aa33.02■■■□□ 2.88
PAF1-207ENST00000598127 CFAP74Q9C0B2 1584 aa33.01■■■□□ 2.88
PAF1-207ENST00000598127 AKNAQ7Z591 1439 aa32.98■■■□□ 2.87
PAF1-207ENST00000598127 MTUS2Q5JR59 1369 aa32.96■■■□□ 2.87
PAF1-207ENST00000598127 EFCAB2Q5VUJ9 269 aa32.95■■■□□ 2.87
PAF1-207ENST00000598127 RAPGEF3O95398 923 aa32.9■■■□□ 2.86
PAF1-207ENST00000598127 CDC42BPBQ9Y5S2 1711 aa32.9■■■□□ 2.86
PAF1-207ENST00000598127 TIAM1Q13009 1591 aa32.88■■■□□ 2.85
PAF1-207ENST00000598127 ARHGAP5Q13017 1502 aa32.87■■■□□ 2.85
PAF1-207ENST00000598127 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
PAF1-207ENST00000598127 CDC42BPAQ5VT25 1732 aa32.87■■■□□ 2.85
PAF1-207ENST00000598127 DENND4BO75064 1496 aaPredicted RBP32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms