RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 KIAA0586Q9BVV6 1533 aa28.24■■■□□ 2.11
SSBP4-204ENST00000597724 ERCC6L2Q5T890 1561 aa28.24■■■□□ 2.11
SSBP4-204ENST00000597724 RAPGEF2Q9Y4G8 1499 aa28.21■■■□□ 2.11
SSBP4-204ENST00000597724 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
SSBP4-204ENST00000597724 CHIC1Q5VXU3 224 aa28.17■■■□□ 2.1
SSBP4-204ENST00000597724 PRXQ9BXM0 1461 aa28.09■■■□□ 2.09
SSBP4-204ENST00000597724 CSRNP3Q8WYN3 585 aa28.07■■■□□ 2.08
SSBP4-204ENST00000597724 EEA1Q15075 1411 aa28.05■■■□□ 2.08
SSBP4-204ENST00000597724 IQGAP2Q13576 1575 aa28.04■■■□□ 2.08
SSBP4-204ENST00000597724 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
SSBP4-204ENST00000597724 CARMIL2Q6F5E8 1435 aa27.92■■■□□ 2.06
SSBP4-204ENST00000597724 CTTNBP2Q8WZ74 1663 aa27.91■■■□□ 2.06
SSBP4-204ENST00000597724 UGGT2Q9NYU1 1516 aa27.9■■■□□ 2.06
SSBP4-204ENST00000597724 DISP1Q96F81 1524 aa27.87■■■□□ 2.05
SSBP4-204ENST00000597724 TNIKQ9UKE5 1360 aa27.85■■■□□ 2.05
SSBP4-204ENST00000597724 PTPRGP23470 1445 aa27.84■■■□□ 2.05
SSBP4-204ENST00000597724 TRHP20396 242 aaPredicted RBP27.81■■■□□ 2.04
SSBP4-204ENST00000597724 TTBK1Q5TCY1 1321 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-204ENST00000597724 KIAA0556O60303 1618 aa27.77■■■□□ 2.04
SSBP4-204ENST00000597724 KIF21BO75037 1637 aa27.75■■■□□ 2.03
SSBP4-204ENST00000597724 ADCY10Q96PN6 1610 aa27.75■■■□□ 2.03
SSBP4-204ENST00000597724 GOLGA3Q08378 1498 aa27.73■■■□□ 2.03
SSBP4-204ENST00000597724 NPM1P06748 294 aaKnown RBP eCLIP27.7■■■□□ 2.02
SSBP4-204ENST00000597724 UACAQ9BZF9 1416 aa27.65■■■□□ 2.02
SSBP4-204ENST00000597724 UHRF1BP1LA0JNW5 1464 aa27.64■■■□□ 2.01
SSBP4-204ENST00000597724 MAPKBP1O60336 1514 aa27.6■■■□□ 2.01
SSBP4-204ENST00000597724 ABCC2Q92887 1545 aa27.6■■■□□ 2.01
SSBP4-204ENST00000597724 SAMD9Q5K651 1589 aa27.57■■■□□ 2
SSBP4-204ENST00000597724 P3H3Q8IVL6 736 aa27.57■■■□□ 2
SSBP4-204ENST00000597724 EHMT2Q96KQ7 1210 aa27.57■■■□□ 2
SSBP4-204ENST00000597724 UBTFP17480 764 aaKnown RBP27.55■■■□□ 2
SSBP4-204ENST00000597724 PLB1Q6P1J6 1458 aa27.53■■■□□ 2
SSBP4-204ENST00000597724 RANGAP1P46060 587 aaPredicted RBP27.52■■■□□ 2
SSBP4-204ENST00000597724 KDM5BQ9UGL1 1544 aa27.51■■□□□ 1.99
SSBP4-204ENST00000597724 KIF13AQ9H1H9 1805 aa27.49■■□□□ 1.99
SSBP4-204ENST00000597724 ABCC10Q5T3U5 1492 aa27.49■■□□□ 1.99
SSBP4-204ENST00000597724 ABCA8O94911 1581 aa27.48■■□□□ 1.99
SSBP4-204ENST00000597724 FAM69CQ0P6D2 419 aa27.45■■□□□ 1.98
SSBP4-204ENST00000597724 ASXL2Q76L83 1435 aa27.43■■□□□ 1.98
SSBP4-204ENST00000597724 DIP2BQ9P265 1576 aa27.43■■□□□ 1.98
SSBP4-204ENST00000597724 ZCCHC11Q5TAX3 1644 aaKnown RBP27.42■■□□□ 1.98
SSBP4-204ENST00000597724 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
SSBP4-204ENST00000597724 FHOD3Q2V2M9 1422 aa27.41■■□□□ 1.98
SSBP4-204ENST00000597724 RAPGEF6Q8TEU7 1601 aa27.31■■□□□ 1.96
SSBP4-204ENST00000597724 ARHGAP35Q9NRY4 1499 aa27.3■■□□□ 1.96
SSBP4-204ENST00000597724 ATP10BO94823 1461 aa27.28■■□□□ 1.96
SSBP4-204ENST00000597724 GLI2P10070 1586 aa27.27■■□□□ 1.96
SSBP4-204ENST00000597724 WDR7Q9Y4E6 1490 aa27.27■■□□□ 1.96
SSBP4-204ENST00000597724 EPRSP07814 1512 aaKnown RBP27.26■■□□□ 1.96
SSBP4-204ENST00000597724 ARID3CA6NKF2 412 aa27.25■■□□□ 1.95
SSBP4-204ENST00000597724 NUP153P49790 1475 aaKnown RBP27.24■■□□□ 1.95
SSBP4-204ENST00000597724 TSPOAP1O95153 1857 aa27.19■■□□□ 1.94
SSBP4-204ENST00000597724 FMN1Q68DA7 1419 aa27.18■■□□□ 1.94
SSBP4-204ENST00000597724 KCNH8Q96L42 1107 aa27.17■■□□□ 1.94
SSBP4-204ENST00000597724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.15■■□□□ 1.94
SSBP4-204ENST00000597724 HNRNPUL2Q1KMD3 747 aaKnown RBP27.15■■□□□ 1.94
SSBP4-204ENST00000597724 MAP3K4Q9Y6R4 1608 aa27.14■■□□□ 1.94
SSBP4-204ENST00000597724 PPRC1Q5VV67 1664 aaKnown RBP27.11■■□□□ 1.93
SSBP4-204ENST00000597724 CLIP1P30622 1438 aa27.1■■□□□ 1.93
SSBP4-204ENST00000597724 ATP1B4Q9UN42 357 aaPredicted RBP27.05■■□□□ 1.92
SSBP4-204ENST00000597724 CFAP43Q8NDM7 1665 aa27.05■■□□□ 1.92
SSBP4-204ENST00000597724 PLEKHD1A6NEE1 506 aa27.04■■□□□ 1.92
SSBP4-204ENST00000597724 CD109Q6YHK3 1445 aa27.04■■□□□ 1.92
SSBP4-204ENST00000597724 HECW1Q76N89 1606 aa27.04■■□□□ 1.92
SSBP4-204ENST00000597724 CDK13Q14004 1512 aaKnown RBP27.02■■□□□ 1.92
SSBP4-204ENST00000597724 LOC105371045A0A1W2PR82 267 aa27.02■■□□□ 1.92
SSBP4-204ENST00000597724 TEX14Q8IWB6 1497 aa27.01■■□□□ 1.91
SSBP4-204ENST00000597724 KDM6BO15054 1643 aa27■■□□□ 1.91
SSBP4-204ENST00000597724 MAGI3Q5TCQ9 1506 aa26.99■■□□□ 1.91
SSBP4-204ENST00000597724 CASKIN1Q8WXD9 1431 aa26.98■■□□□ 1.91
SSBP4-204ENST00000597724 ABCA9Q8IUA7 1624 aa26.98■■□□□ 1.91
SSBP4-204ENST00000597724 CEP162Q5TB80 1403 aa26.96■■□□□ 1.91
SSBP4-204ENST00000597724 PCF11O94913 1555 aaKnown RBP26.94■■□□□ 1.9
SSBP4-204ENST00000597724 LRRIQ1Q96JM4 1722 aa26.92■■□□□ 1.9
SSBP4-204ENST00000597724 CDK11AQ9UQ88 783 aaPredicted RBP26.91■■□□□ 1.9
SSBP4-204ENST00000597724 COL17A1Q9UMD9 1497 aaPredicted RBP26.9■■□□□ 1.9
SSBP4-204ENST00000597724 FYCO1Q9BQS8 1478 aa26.89■■□□□ 1.9
SSBP4-204ENST00000597724 CCDC18Q5T9S5 1454 aa26.86■■□□□ 1.89
SSBP4-204ENST00000597724 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.85■■□□□ 1.892e-6■■■□□ 18.3
SSBP4-204ENST00000597724 TROQ12816 1431 aaPredicted RBP26.82■■□□□ 1.88
SSBP4-204ENST00000597724 TTC37Q6PGP7 1564 aa26.8■■□□□ 1.88
SSBP4-204ENST00000597724 PHLDB1Q86UU1 1377 aa26.79■■□□□ 1.88
SSBP4-204ENST00000597724 NEO1Q92859 1461 aa26.78■■□□□ 1.88
SSBP4-204ENST00000597724 ARAP3Q8WWN8 1544 aa26.77■■□□□ 1.88
SSBP4-204ENST00000597724 KIF14Q15058 1648 aa26.73■■□□□ 1.87
SSBP4-204ENST00000597724 PLCH2O75038 1416 aa26.71■■□□□ 1.87
SSBP4-204ENST00000597724 FANCAO15360 1455 aa26.69■■□□□ 1.86
SSBP4-204ENST00000597724 AKNAQ7Z591 1439 aa26.67■■□□□ 1.86
SSBP4-204ENST00000597724 CFAP74Q9C0B2 1584 aa26.66■■□□□ 1.86
SSBP4-204ENST00000597724 MYO5CQ9NQX4 1742 aa26.65■■□□□ 1.86
SSBP4-204ENST00000597724 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
SSBP4-204ENST00000597724 RAPGEF3O95398 923 aa26.64■■□□□ 1.86
SSBP4-204ENST00000597724 EFCAB2Q5VUJ9 269 aa26.62■■□□□ 1.85
SSBP4-204ENST00000597724 DENND4BO75064 1496 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-204ENST00000597724 MTUS2Q5JR59 1369 aa26.58■■□□□ 1.85
SSBP4-204ENST00000597724 FRMPD1Q5SYB0 1578 aa26.57■■□□□ 1.84
SSBP4-204ENST00000597724 ARHGAP5Q13017 1502 aa26.55■■□□□ 1.84
SSBP4-204ENST00000597724 CDC42BPBQ9Y5S2 1711 aa26.55■■□□□ 1.84
SSBP4-204ENST00000597724 ADGRL1O94910 1474 aa26.55■■□□□ 1.84
SSBP4-204ENST00000597724 SCAPERQ9BY12 1400 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms