RNA–Protein interactions for RNA: ENST00000597466.1

SHD-203, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 2

Gene SHD, Length 289 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-203ENST00000597466 AEBP2Q6ZN18 517 aaPredicted RBP19.26■□□□□ 0.67
SHD-203ENST00000597466 IGF1RP08069 1367 aa19.23■□□□□ 0.67
SHD-203ENST00000597466 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
SHD-203ENST00000597466 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
SHD-203ENST00000597466 CUL7Q14999 1698 aa19.19■□□□□ 0.66
SHD-203ENST00000597466 KIAA0586Q9BVV6 1533 aa19.19■□□□□ 0.66
SHD-203ENST00000597466 ABCC10Q5T3U5 1492 aa19.17■□□□□ 0.66
SHD-203ENST00000597466 MAPKBP1O60336 1514 aa19.16■□□□□ 0.66
SHD-203ENST00000597466 DIP2BQ9P265 1576 aa19.16■□□□□ 0.66
SHD-203ENST00000597466 FAM69CQ0P6D2 419 aa19.15■□□□□ 0.66
SHD-203ENST00000597466 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
SHD-203ENST00000597466 CARMIL1Q5VZK9 1371 aa19.08■□□□□ 0.65
SHD-203ENST00000597466 TTBK1Q5TCY1 1321 aaPredicted RBP19.06■□□□□ 0.64
SHD-203ENST00000597466 TSPOAP1O95153 1857 aa19.03■□□□□ 0.64
SHD-203ENST00000597466 PTPRGP23470 1445 aa19.03■□□□□ 0.64
SHD-203ENST00000597466 IQGAP2Q13576 1575 aa19.02■□□□□ 0.63
SHD-203ENST00000597466 KDM6BO15054 1643 aa19■□□□□ 0.63
SHD-203ENST00000597466 TNIKQ9UKE5 1360 aa18.98■□□□□ 0.63
SHD-203ENST00000597466 ABCC2Q92887 1545 aa18.97■□□□□ 0.63
SHD-203ENST00000597466 DISP1Q96F81 1524 aa18.97■□□□□ 0.63
SHD-203ENST00000597466 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
SHD-203ENST00000597466 ASXL2Q76L83 1435 aa18.93■□□□□ 0.62
SHD-203ENST00000597466 PPRC1Q5VV67 1664 aaKnown RBP18.92■□□□□ 0.62
SHD-203ENST00000597466 UHRF1BP1LA0JNW5 1464 aa18.9■□□□□ 0.62
SHD-203ENST00000597466 UACAQ9BZF9 1416 aa18.9■□□□□ 0.62
SHD-203ENST00000597466 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
SHD-203ENST00000597466 UGGT2Q9NYU1 1516 aa18.89■□□□□ 0.61
SHD-203ENST00000597466 KDM4FA0A1W2PPD8 638 aa18.88■□□□□ 0.61
SHD-203ENST00000597466 KIAA0556O60303 1618 aa18.87■□□□□ 0.61
SHD-203ENST00000597466 GLI2P10070 1586 aa18.87■□□□□ 0.61
SHD-203ENST00000597466 PLB1Q6P1J6 1458 aa18.87■□□□□ 0.61
SHD-203ENST00000597466 ZCCHC11Q5TAX3 1644 aaKnown RBP18.84■□□□□ 0.61
SHD-203ENST00000597466 KDM5BQ9UGL1 1544 aa18.84■□□□□ 0.61
SHD-203ENST00000597466 EPRSP07814 1512 aaKnown RBP18.82■□□□□ 0.6
SHD-203ENST00000597466 COL17A1Q9UMD9 1497 aaPredicted RBP18.8■□□□□ 0.6
SHD-203ENST00000597466 MAP3K4Q9Y6R4 1608 aa18.8■□□□□ 0.6
SHD-203ENST00000597466 CTTNBP2Q8WZ74 1663 aa18.79■□□□□ 0.6
SHD-203ENST00000597466 WDR7Q9Y4E6 1490 aa18.72■□□□□ 0.59
SHD-203ENST00000597466 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
SHD-203ENST00000597466 ABCA8O94911 1581 aa18.7■□□□□ 0.58
SHD-203ENST00000597466 PRXQ9BXM0 1461 aa18.7■□□□□ 0.58
SHD-203ENST00000597466 TEX14Q8IWB6 1497 aa18.68■□□□□ 0.58
SHD-203ENST00000597466 GOLGA3Q08378 1498 aa18.66■□□□□ 0.58
SHD-203ENST00000597466 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
SHD-203ENST00000597466 CFAP43Q8NDM7 1665 aa18.6■□□□□ 0.57
SHD-203ENST00000597466 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
SHD-203ENST00000597466 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
SHD-203ENST00000597466 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
SHD-203ENST00000597466 P3H3Q8IVL6 736 aa18.58■□□□□ 0.56
SHD-203ENST00000597466 ATP10BO94823 1461 aa18.53■□□□□ 0.56
SHD-203ENST00000597466 SAMD9Q5K651 1589 aa18.52■□□□□ 0.56
SHD-203ENST00000597466 HECW2Q9P2P5 1572 aa18.51■□□□□ 0.55
SHD-203ENST00000597466 KIF21BO75037 1637 aa18.49■□□□□ 0.55
SHD-203ENST00000597466 CSRNP3Q8WYN3 585 aa18.47■□□□□ 0.55
SHD-203ENST00000597466 ABCA9Q8IUA7 1624 aa18.46■□□□□ 0.55
SHD-203ENST00000597466 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
SHD-203ENST00000597466 ARAP3Q8WWN8 1544 aa18.44■□□□□ 0.54
SHD-203ENST00000597466 RANGAP1P46060 587 aaPredicted RBP18.43■□□□□ 0.54
SHD-203ENST00000597466 ILDR1Q86SU0 546 aaPredicted RBP18.43■□□□□ 0.54
SHD-203ENST00000597466 NUP153P49790 1475 aaKnown RBP18.42■□□□□ 0.54
SHD-203ENST00000597466 FHOD3Q2V2M9 1422 aa18.41■□□□□ 0.54
SHD-203ENST00000597466 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
SHD-203ENST00000597466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
SHD-203ENST00000597466 RAPGEF3O95398 923 aa18.37■□□□□ 0.53
SHD-203ENST00000597466 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
SHD-203ENST00000597466 FAM9AQ8IZU1 332 aaPredicted RBP18.36■□□□□ 0.53
SHD-203ENST00000597466 NEO1Q92859 1461 aa18.33■□□□□ 0.53
SHD-203ENST00000597466 EEA1Q15075 1411 aa18.33■□□□□ 0.53
SHD-203ENST00000597466 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
SHD-203ENST00000597466 PHLDB1Q86UU1 1377 aa18.31■□□□□ 0.52
SHD-203ENST00000597466 PTPRMP28827 1452 aa18.28■□□□□ 0.52
SHD-203ENST00000597466 TTC37Q6PGP7 1564 aa18.28■□□□□ 0.52
SHD-203ENST00000597466 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.27■□□□□ 0.51
SHD-203ENST00000597466 BCORL1Q5H9F3 1711 aa18.26■□□□□ 0.51
SHD-203ENST00000597466 EFCAB5A4FU69 1503 aa18.26■□□□□ 0.51
SHD-203ENST00000597466 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
SHD-203ENST00000597466 MADDQ8WXG6 1647 aa18.26■□□□□ 0.51
SHD-203ENST00000597466 RICTORQ6R327 1708 aa18.26■□□□□ 0.51
SHD-203ENST00000597466 ARHGEF40Q8TER5 1519 aa18.24■□□□□ 0.51
SHD-203ENST00000597466 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
SHD-203ENST00000597466 FANCAO15360 1455 aa18.23■□□□□ 0.51
SHD-203ENST00000597466 PLEKHD1A6NEE1 506 aa18.23■□□□□ 0.51
SHD-203ENST00000597466 AKNAQ7Z591 1439 aa18.23■□□□□ 0.51
SHD-203ENST00000597466 DENND4BO75064 1496 aaPredicted RBP18.22■□□□□ 0.51
SHD-203ENST00000597466 ARID4BQ4LE39 1312 aaPredicted RBP18.22■□□□□ 0.51
SHD-203ENST00000597466 SIGLEC1Q9BZZ2 1709 aa18.21■□□□□ 0.51
SHD-203ENST00000597466 CFAP74Q9C0B2 1584 aa18.19■□□□□ 0.5
SHD-203ENST00000597466 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
SHD-203ENST00000597466 YEATS2Q9ULM3 1422 aa18.17■□□□□ 0.5
SHD-203ENST00000597466 ZMYM4Q5VZL5 1548 aa18.16■□□□□ 0.5
SHD-203ENST00000597466 LMTK3Q96Q04 1460 aa18.15■□□□□ 0.5
SHD-203ENST00000597466 PCF11O94913 1555 aaKnown RBP18.15■□□□□ 0.5
SHD-203ENST00000597466 ZFYVE16Q7Z3T8 1539 aa18.14■□□□□ 0.49
SHD-203ENST00000597466 ARHGAP35Q9NRY4 1499 aa18.14■□□□□ 0.49
SHD-203ENST00000597466 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
SHD-203ENST00000597466 UBTFP17480 764 aaKnown RBP18.11■□□□□ 0.49
SHD-203ENST00000597466 PLCH2O75038 1416 aa18.11■□□□□ 0.49
SHD-203ENST00000597466 KIF14Q15058 1648 aa18.1■□□□□ 0.49
SHD-203ENST00000597466 POGZQ7Z3K3 1410 aa18.1■□□□□ 0.49
SHD-203ENST00000597466 SCAPERQ9BY12 1400 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms