RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 ERCC6L2Q5T890 1561 aa22.89■■□□□ 1.26
PRKD2-208ENST00000597390 RUSC2Q8N2Y8 1516 aa22.85■■□□□ 1.25
PRKD2-208ENST00000597390 JPH4Q96JJ6 628 aa22.8■■□□□ 1.24
PRKD2-208ENST00000597390 PRG4Q92954 1404 aaPredicted RBP22.79■■□□□ 1.24
PRKD2-208ENST00000597390 CARMIL1Q5VZK9 1371 aa22.77■■□□□ 1.24
PRKD2-208ENST00000597390 KIAA0586Q9BVV6 1533 aa22.75■■□□□ 1.23
PRKD2-208ENST00000597390 EEA1Q15075 1411 aa22.72■■□□□ 1.23
PRKD2-208ENST00000597390 FAM9AQ8IZU1 332 aaPredicted RBP22.63■■□□□ 1.21
PRKD2-208ENST00000597390 CSRNP3Q8WYN3 585 aa22.62■■□□□ 1.21
PRKD2-208ENST00000597390 RAPGEF2Q9Y4G8 1499 aa22.61■■□□□ 1.21
PRKD2-208ENST00000597390 IQGAP2Q13576 1575 aa22.59■■□□□ 1.21
PRKD2-208ENST00000597390 PRXQ9BXM0 1461 aa22.57■■□□□ 1.2
PRKD2-208ENST00000597390 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
PRKD2-208ENST00000597390 ADCY10Q96PN6 1610 aa22.51■■□□□ 1.19
PRKD2-208ENST00000597390 KIF21BO75037 1637 aa22.5■■□□□ 1.19
PRKD2-208ENST00000597390 NPM1P06748 294 aaKnown RBP eCLIP22.47■■□□□ 1.19
PRKD2-208ENST00000597390 TNIKQ9UKE5 1360 aa22.47■■□□□ 1.19
PRKD2-208ENST00000597390 PTPRGP23470 1445 aa22.47■■□□□ 1.19
PRKD2-208ENST00000597390 CTTNBP2Q8WZ74 1663 aa22.47■■□□□ 1.19
PRKD2-208ENST00000597390 UGGT2Q9NYU1 1516 aa22.46■■□□□ 1.19
PRKD2-208ENST00000597390 KIF13AQ9H1H9 1805 aa22.45■■□□□ 1.18
PRKD2-208ENST00000597390 DISP1Q96F81 1524 aa22.44■■□□□ 1.18
PRKD2-208ENST00000597390 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
PRKD2-208ENST00000597390 TTBK1Q5TCY1 1321 aaPredicted RBP22.39■■□□□ 1.17
PRKD2-208ENST00000597390 KIAA0556O60303 1618 aa22.39■■□□□ 1.17
PRKD2-208ENST00000597390 ILDR1Q86SU0 546 aaPredicted RBP22.38■■□□□ 1.17
PRKD2-208ENST00000597390 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
PRKD2-208ENST00000597390 ABCC10Q5T3U5 1492 aa22.36■■□□□ 1.17
PRKD2-208ENST00000597390 DIP2BQ9P265 1576 aa22.33■■□□□ 1.17
PRKD2-208ENST00000597390 UHRF1BP1LA0JNW5 1464 aa22.33■■□□□ 1.17
PRKD2-208ENST00000597390 ABCC2Q92887 1545 aa22.33■■□□□ 1.16
PRKD2-208ENST00000597390 UACAQ9BZF9 1416 aa22.32■■□□□ 1.16
PRKD2-208ENST00000597390 FAM69CQ0P6D2 419 aa22.3■■□□□ 1.16
PRKD2-208ENST00000597390 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
PRKD2-208ENST00000597390 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
PRKD2-208ENST00000597390 KDM5BQ9UGL1 1544 aa22.23■■□□□ 1.15
PRKD2-208ENST00000597390 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
PRKD2-208ENST00000597390 ASXL2Q76L83 1435 aa22.21■■□□□ 1.15
PRKD2-208ENST00000597390 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
PRKD2-208ENST00000597390 ZCCHC11Q5TAX3 1644 aaKnown RBP22.2■■□□□ 1.14
PRKD2-208ENST00000597390 TSPOAP1O95153 1857 aa22.17■■□□□ 1.14
PRKD2-208ENST00000597390 ABCA8O94911 1581 aa22.16■■□□□ 1.14
PRKD2-208ENST00000597390 GLI2P10070 1586 aa22.15■■□□□ 1.14
PRKD2-208ENST00000597390 SAMD9Q5K651 1589 aa22.14■■□□□ 1.13
PRKD2-208ENST00000597390 KDM4FA0A1W2PPD8 638 aa22.12■■□□□ 1.13
PRKD2-208ENST00000597390 EPRSP07814 1512 aaKnown RBP22.09■■□□□ 1.13
PRKD2-208ENST00000597390 P3H3Q8IVL6 736 aa22.08■■□□□ 1.12
PRKD2-208ENST00000597390 KDM6BO15054 1643 aa22.07■■□□□ 1.12
PRKD2-208ENST00000597390 PPRC1Q5VV67 1664 aaKnown RBP22.06■■□□□ 1.12
PRKD2-208ENST00000597390 WDR7Q9Y4E6 1490 aa22.05■■□□□ 1.12
PRKD2-208ENST00000597390 MAP3K4Q9Y6R4 1608 aa22.04■■□□□ 1.12
PRKD2-208ENST00000597390 CEP162Q5TB80 1403 aa22■■□□□ 1.11
PRKD2-208ENST00000597390 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
PRKD2-208ENST00000597390 EFCAB5A4FU69 1503 aa21.99■■□□□ 1.11
PRKD2-208ENST00000597390 RAPGEF6Q8TEU7 1601 aa21.99■■□□□ 1.11
PRKD2-208ENST00000597390 ARHGAP35Q9NRY4 1499 aa21.99■■□□□ 1.11
PRKD2-208ENST00000597390 CLIP1P30622 1438 aa21.97■■□□□ 1.11
PRKD2-208ENST00000597390 ATP10BO94823 1461 aa21.95■■□□□ 1.11
PRKD2-208ENST00000597390 FHOD3Q2V2M9 1422 aa21.95■■□□□ 1.1
PRKD2-208ENST00000597390 TEX14Q8IWB6 1497 aa21.95■■□□□ 1.1
PRKD2-208ENST00000597390 CFAP43Q8NDM7 1665 aa21.94■■□□□ 1.1
PRKD2-208ENST00000597390 ARID3CA6NKF2 412 aa21.91■■□□□ 1.1
PRKD2-208ENST00000597390 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
PRKD2-208ENST00000597390 CD109Q6YHK3 1445 aa21.88■■□□□ 1.09
PRKD2-208ENST00000597390 NUP153P49790 1475 aaKnown RBP21.87■■□□□ 1.09
PRKD2-208ENST00000597390 MAGI3Q5TCQ9 1506 aa21.87■■□□□ 1.09
PRKD2-208ENST00000597390 COL17A1Q9UMD9 1497 aaPredicted RBP21.83■■□□□ 1.09
PRKD2-208ENST00000597390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
PRKD2-208ENST00000597390 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
PRKD2-208ENST00000597390 ABCA9Q8IUA7 1624 aa21.81■■□□□ 1.08
PRKD2-208ENST00000597390 FMN1Q68DA7 1419 aa21.76■■□□□ 1.07
PRKD2-208ENST00000597390 PLEKHD1A6NEE1 506 aa21.73■■□□□ 1.07
PRKD2-208ENST00000597390 HECW1Q76N89 1606 aa21.71■■□□□ 1.07
PRKD2-208ENST00000597390 VPS8Q8N3P4 1428 aa21.7■■□□□ 1.07
PRKD2-208ENST00000597390 PCF11O94913 1555 aaKnown RBP21.69■■□□□ 1.06
PRKD2-208ENST00000597390 CDK13Q14004 1512 aaKnown RBP21.69■■□□□ 1.06
PRKD2-208ENST00000597390 ARAP3Q8WWN8 1544 aa21.69■■□□□ 1.06
PRKD2-208ENST00000597390 PHLDB1Q86UU1 1377 aa21.69■■□□□ 1.06
PRKD2-208ENST00000597390 CASKIN1Q8WXD9 1431 aa21.67■■□□□ 1.06
PRKD2-208ENST00000597390 ADGRL1O94910 1474 aa21.67■■□□□ 1.06
PRKD2-208ENST00000597390 NEO1Q92859 1461 aa21.66■■□□□ 1.06
PRKD2-208ENST00000597390 FYCO1Q9BQS8 1478 aa21.65■■□□□ 1.06
PRKD2-208ENST00000597390 HECW2Q9P2P5 1572 aa21.65■■□□□ 1.06
PRKD2-208ENST00000597390 ATP1B4Q9UN42 357 aaPredicted RBP21.64■■□□□ 1.06
PRKD2-208ENST00000597390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.64■■□□□ 1.05
PRKD2-208ENST00000597390 LRRIQ1Q96JM4 1722 aa21.62■■□□□ 1.05
PRKD2-208ENST00000597390 TTC37Q6PGP7 1564 aa21.6■■□□□ 1.05
PRKD2-208ENST00000597390 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
PRKD2-208ENST00000597390 CDK11AQ9UQ88 783 aaPredicted RBP21.58■■□□□ 1.04
PRKD2-208ENST00000597390 FANCAO15360 1455 aa21.55■■□□□ 1.04
PRKD2-208ENST00000597390 FBXO41Q8TF61 875 aa21.54■■□□□ 1.04
PRKD2-208ENST00000597390 AKNAQ7Z591 1439 aa21.53■■□□□ 1.04
PRKD2-208ENST00000597390 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
PRKD2-208ENST00000597390 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
PRKD2-208ENST00000597390 KIF14Q15058 1648 aa21.51■■□□□ 1.03
PRKD2-208ENST00000597390 CCDC18Q5T9S5 1454 aa21.51■■□□□ 1.03
PRKD2-208ENST00000597390 TROQ12816 1431 aaPredicted RBP21.51■■□□□ 1.03
PRKD2-208ENST00000597390 MYO5CQ9NQX4 1742 aa21.51■■□□□ 1.03
PRKD2-208ENST00000597390 DENND4BO75064 1496 aaPredicted RBP21.5■■□□□ 1.03
PRKD2-208ENST00000597390 PLCH2O75038 1416 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms