RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 KIAA0586Q9BVV6 1533 aa24.19■■□□□ 1.46
C19orf54-206ENST00000596940 CARMIL1Q5VZK9 1371 aa24.17■■□□□ 1.46
C19orf54-206ENST00000596940 CUL7Q14999 1698 aa24.16■■□□□ 1.46
C19orf54-206ENST00000596940 NPM1P06748 294 aaKnown RBP eCLIP24.15■■□□□ 1.46
C19orf54-206ENST00000596940 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
C19orf54-206ENST00000596940 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
C19orf54-206ENST00000596940 PTPRGP23470 1445 aa23.99■■□□□ 1.43
C19orf54-206ENST00000596940 FAM69CQ0P6D2 419 aa23.95■■□□□ 1.42
C19orf54-206ENST00000596940 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
C19orf54-206ENST00000596940 TNIKQ9UKE5 1360 aa23.93■■□□□ 1.42
C19orf54-206ENST00000596940 MAPKBP1O60336 1514 aa23.91■■□□□ 1.42
C19orf54-206ENST00000596940 ABCC10Q5T3U5 1492 aa23.9■■□□□ 1.42
C19orf54-206ENST00000596940 TTBK1Q5TCY1 1321 aaPredicted RBP23.89■■□□□ 1.42
C19orf54-206ENST00000596940 IQGAP2Q13576 1575 aa23.89■■□□□ 1.41
C19orf54-206ENST00000596940 ADCY10Q96PN6 1610 aa23.87■■□□□ 1.41
C19orf54-206ENST00000596940 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
C19orf54-206ENST00000596940 ABCC2Q92887 1545 aa23.78■■□□□ 1.4
C19orf54-206ENST00000596940 KIF13AQ9H1H9 1805 aa23.77■■□□□ 1.4
C19orf54-206ENST00000596940 UACAQ9BZF9 1416 aa23.77■■□□□ 1.4
C19orf54-206ENST00000596940 DISP1Q96F81 1524 aa23.77■■□□□ 1.4
C19orf54-206ENST00000596940 UGGT2Q9NYU1 1516 aa23.77■■□□□ 1.4
C19orf54-206ENST00000596940 UHRF1BP1LA0JNW5 1464 aa23.76■■□□□ 1.39
C19orf54-206ENST00000596940 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
C19orf54-206ENST00000596940 PLB1Q6P1J6 1458 aa23.73■■□□□ 1.39
C19orf54-206ENST00000596940 FAM9AQ8IZU1 332 aaPredicted RBP23.7■■□□□ 1.38
C19orf54-206ENST00000596940 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
C19orf54-206ENST00000596940 PRXQ9BXM0 1461 aa23.68■■□□□ 1.38
C19orf54-206ENST00000596940 ASXL2Q76L83 1435 aa23.68■■□□□ 1.38
C19orf54-206ENST00000596940 KIAA0556O60303 1618 aa23.64■■□□□ 1.38
C19orf54-206ENST00000596940 CSRNP3Q8WYN3 585 aa23.64■■□□□ 1.37
C19orf54-206ENST00000596940 KDM5BQ9UGL1 1544 aa23.63■■□□□ 1.37
C19orf54-206ENST00000596940 GLI2P10070 1586 aa23.57■■□□□ 1.36
C19orf54-206ENST00000596940 EEA1Q15075 1411 aa23.55■■□□□ 1.36
C19orf54-206ENST00000596940 CTTNBP2Q8WZ74 1663 aa23.54■■□□□ 1.36
C19orf54-206ENST00000596940 KDM6BO15054 1643 aa23.54■■□□□ 1.36
C19orf54-206ENST00000596940 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
C19orf54-206ENST00000596940 TSPOAP1O95153 1857 aa23.48■■□□□ 1.35
C19orf54-206ENST00000596940 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
C19orf54-206ENST00000596940 ZCCHC11Q5TAX3 1644 aaKnown RBP23.47■■□□□ 1.35
C19orf54-206ENST00000596940 TEX14Q8IWB6 1497 aa23.46■■□□□ 1.35
C19orf54-206ENST00000596940 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
C19orf54-206ENST00000596940 KCNH8Q96L42 1107 aa23.43■■□□□ 1.34
C19orf54-206ENST00000596940 ABCA8O94911 1581 aa23.43■■□□□ 1.34
C19orf54-206ENST00000596940 MAP3K4Q9Y6R4 1608 aa23.37■■□□□ 1.33
C19orf54-206ENST00000596940 CD109Q6YHK3 1445 aa23.36■■□□□ 1.33
C19orf54-206ENST00000596940 PPRC1Q5VV67 1664 aaKnown RBP23.34■■□□□ 1.33
C19orf54-206ENST00000596940 KDM4FA0A1W2PPD8 638 aa23.32■■□□□ 1.32
C19orf54-206ENST00000596940 ARID3CA6NKF2 412 aa23.31■■□□□ 1.32
C19orf54-206ENST00000596940 RANGAP1P46060 587 aaPredicted RBP23.31■■□□□ 1.32
C19orf54-206ENST00000596940 MAGI3Q5TCQ9 1506 aa23.31■■□□□ 1.32
C19orf54-206ENST00000596940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.3■■□□□ 1.32
C19orf54-206ENST00000596940 HNRNPUL2Q1KMD3 747 aaKnown RBP23.3■■□□□ 1.32
C19orf54-206ENST00000596940 ATP10BO94823 1461 aa23.3■■□□□ 1.32
C19orf54-206ENST00000596940 COL17A1Q9UMD9 1497 aaPredicted RBP23.3■■□□□ 1.32
C19orf54-206ENST00000596940 SAMD9Q5K651 1589 aa23.28■■□□□ 1.32
C19orf54-206ENST00000596940 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
C19orf54-206ENST00000596940 CFAP43Q8NDM7 1665 aa23.23■■□□□ 1.31
C19orf54-206ENST00000596940 PHLDB1Q86UU1 1377 aa23.22■■□□□ 1.31
C19orf54-206ENST00000596940 KIF21BO75037 1637 aa23.2■■□□□ 1.3
C19orf54-206ENST00000596940 UBTFP17480 764 aaKnown RBP23.2■■□□□ 1.3
C19orf54-206ENST00000596940 FHOD3Q2V2M9 1422 aa23.19■■□□□ 1.3
C19orf54-206ENST00000596940 PLEKHD1A6NEE1 506 aa23.19■■□□□ 1.3
C19orf54-206ENST00000596940 RAPGEF6Q8TEU7 1601 aa23.19■■□□□ 1.3
C19orf54-206ENST00000596940 EFCAB5A4FU69 1503 aa23.16■■□□□ 1.3
C19orf54-206ENST00000596940 NUP153P49790 1475 aaKnown RBP23.15■■□□□ 1.3
C19orf54-206ENST00000596940 ADGRL1O94910 1474 aa23.13■■□□□ 1.29
C19orf54-206ENST00000596940 ARAP3Q8WWN8 1544 aa23.12■■□□□ 1.29
C19orf54-206ENST00000596940 ABCA9Q8IUA7 1624 aa23.09■■□□□ 1.29
C19orf54-206ENST00000596940 EHMT2Q96KQ7 1210 aa23.09■■□□□ 1.29
C19orf54-206ENST00000596940 NEO1Q92859 1461 aa23.07■■□□□ 1.28
C19orf54-206ENST00000596940 FMN1Q68DA7 1419 aa23.04■■□□□ 1.28
C19orf54-206ENST00000596940 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
C19orf54-206ENST00000596940 RAPGEF3O95398 923 aa23.01■■□□□ 1.27
C19orf54-206ENST00000596940 ATP1B4Q9UN42 357 aaPredicted RBP23.01■■□□□ 1.27
C19orf54-206ENST00000596940 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
C19orf54-206ENST00000596940 AKNAQ7Z591 1439 aa22.92■■□□□ 1.26
C19orf54-206ENST00000596940 FANCAO15360 1455 aa22.92■■□□□ 1.26
C19orf54-206ENST00000596940 DENND4BO75064 1496 aaPredicted RBP22.92■■□□□ 1.26
C19orf54-206ENST00000596940 CDK13Q14004 1512 aaKnown RBP22.89■■□□□ 1.26
C19orf54-206ENST00000596940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.89■■□□□ 1.26
C19orf54-206ENST00000596940 ARID4BQ4LE39 1312 aaPredicted RBP22.88■■□□□ 1.25
C19orf54-206ENST00000596940 HECW1Q76N89 1606 aa22.87■■□□□ 1.25
C19orf54-206ENST00000596940 PLCH2O75038 1416 aa22.85■■□□□ 1.25
C19orf54-206ENST00000596940 EFCAB2Q5VUJ9 269 aa22.85■■□□□ 1.25
C19orf54-206ENST00000596940 CFAP74Q9C0B2 1584 aa22.84■■□□□ 1.25
C19orf54-206ENST00000596940 CLIP1P30622 1438 aa22.82■■□□□ 1.24
C19orf54-206ENST00000596940 TTC37Q6PGP7 1564 aa22.8■■□□□ 1.24
C19orf54-206ENST00000596940 TROQ12816 1431 aaPredicted RBP22.79■■□□□ 1.24
C19orf54-206ENST00000596940 FRMPD1Q5SYB0 1578 aa22.78■■□□□ 1.24
C19orf54-206ENST00000596940 SCAPERQ9BY12 1400 aa22.78■■□□□ 1.24
C19orf54-206ENST00000596940 MAGI2Q86UL8 1455 aa22.78■■□□□ 1.24
C19orf54-206ENST00000596940 POGZQ7Z3K3 1410 aa22.75■■□□□ 1.23
C19orf54-206ENST00000596940 CASKIN1Q8WXD9 1431 aa22.75■■□□□ 1.23
C19orf54-206ENST00000596940 PTPRMP28827 1452 aa22.73■■□□□ 1.23
C19orf54-206ENST00000596940 CCDC18Q5T9S5 1454 aa22.73■■□□□ 1.23
C19orf54-206ENST00000596940 ARHGEF40Q8TER5 1519 aa22.72■■□□□ 1.23
C19orf54-206ENST00000596940 HECW2Q9P2P5 1572 aa22.72■■□□□ 1.23
C19orf54-206ENST00000596940 ZMYM4Q5VZL5 1548 aa22.72■■□□□ 1.23
C19orf54-206ENST00000596940 KIF14Q15058 1648 aa22.71■■□□□ 1.23
C19orf54-206ENST00000596940 RICTORQ6R327 1708 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms