RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
LINC01440-203ENST00000596828 CYB5RLQ6IPT4 315 aa17.18■□□□□ 0.34
LINC01440-203ENST00000596828 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
LINC01440-203ENST00000596828 ERICH3Q5RHP9 1530 aa17.14■□□□□ 0.33
LINC01440-203ENST00000596828 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
LINC01440-203ENST00000596828 FHAD1B1AJZ9 1412 aa17.11■□□□□ 0.33
LINC01440-203ENST00000596828 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
LINC01440-203ENST00000596828 NUP160Q12769 1436 aa17.04■□□□□ 0.32
LINC01440-203ENST00000596828 KIF27Q86VH2 1401 aa17.04■□□□□ 0.32
LINC01440-203ENST00000596828 KCNA4P22459 653 aa17.03■□□□□ 0.32
LINC01440-203ENST00000596828 ERCC6L2Q5T890 1561 aa17.02■□□□□ 0.32
LINC01440-203ENST00000596828 CUL7Q14999 1698 aa17■□□□□ 0.31
LINC01440-203ENST00000596828 SHROOM2Q13796 1616 aa16.98■□□□□ 0.31
LINC01440-203ENST00000596828 IGF1RP08069 1367 aa16.98■□□□□ 0.31
LINC01440-203ENST00000596828 RUSC2Q8N2Y8 1516 aa16.95■□□□□ 0.3
LINC01440-203ENST00000596828 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
LINC01440-203ENST00000596828 PRG4Q92954 1404 aaPredicted RBP16.9■□□□□ 0.3
LINC01440-203ENST00000596828 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
LINC01440-203ENST00000596828 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
LINC01440-203ENST00000596828 CNKSR2Q8WXI2 1034 aa16.88■□□□□ 0.29
LINC01440-203ENST00000596828 KIAA0586Q9BVV6 1533 aa16.84■□□□□ 0.29
LINC01440-203ENST00000596828 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
LINC01440-203ENST00000596828 TTBK1Q5TCY1 1321 aaPredicted RBP16.78■□□□□ 0.28
LINC01440-203ENST00000596828 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
LINC01440-203ENST00000596828 IQGAP2Q13576 1575 aa16.77■□□□□ 0.28
LINC01440-203ENST00000596828 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
LINC01440-203ENST00000596828 NCBP3Q53F19 620 aaKnown RBP16.76■□□□□ 0.27
LINC01440-203ENST00000596828 CTTNBP2Q8WZ74 1663 aa16.74■□□□□ 0.27
LINC01440-203ENST00000596828 ADCY10Q96PN6 1610 aa16.7■□□□□ 0.26
LINC01440-203ENST00000596828 CARMIL2Q6F5E8 1435 aa16.69■□□□□ 0.26
LINC01440-203ENST00000596828 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
LINC01440-203ENST00000596828 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
LINC01440-203ENST00000596828 PTPRGP23470 1445 aa16.66■□□□□ 0.26
LINC01440-203ENST00000596828 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
LINC01440-203ENST00000596828 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
LINC01440-203ENST00000596828 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
LINC01440-203ENST00000596828 DISP1Q96F81 1524 aa16.64■□□□□ 0.25
LINC01440-203ENST00000596828 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.25
LINC01440-203ENST00000596828 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
LINC01440-203ENST00000596828 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
LINC01440-203ENST00000596828 KIAA0556O60303 1618 aa16.62■□□□□ 0.25
LINC01440-203ENST00000596828 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
LINC01440-203ENST00000596828 TSPOAP1O95153 1857 aa16.57■□□□□ 0.24
LINC01440-203ENST00000596828 MAPKBP1O60336 1514 aa16.56■□□□□ 0.24
LINC01440-203ENST00000596828 FAM69CQ0P6D2 419 aa16.55■□□□□ 0.24
LINC01440-203ENST00000596828 DIP2BQ9P265 1576 aa16.54■□□□□ 0.24
LINC01440-203ENST00000596828 EEA1Q15075 1411 aa16.53■□□□□ 0.24
LINC01440-203ENST00000596828 UACAQ9BZF9 1416 aa16.53■□□□□ 0.24
LINC01440-203ENST00000596828 ABCC2Q92887 1545 aa16.52■□□□□ 0.24
LINC01440-203ENST00000596828 RANGAP1P46060 587 aaPredicted RBP16.52■□□□□ 0.24
LINC01440-203ENST00000596828 GOLGA3Q08378 1498 aa16.52■□□□□ 0.23
LINC01440-203ENST00000596828 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.23
LINC01440-203ENST00000596828 P3H3Q8IVL6 736 aa16.51■□□□□ 0.23
LINC01440-203ENST00000596828 ZCCHC11Q5TAX3 1644 aaKnown RBP16.5■□□□□ 0.23
LINC01440-203ENST00000596828 UHRF1BP1LA0JNW5 1464 aa16.49■□□□□ 0.23
LINC01440-203ENST00000596828 PLB1Q6P1J6 1458 aa16.48■□□□□ 0.23
LINC01440-203ENST00000596828 ASXL2Q76L83 1435 aa16.46■□□□□ 0.23
LINC01440-203ENST00000596828 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
LINC01440-203ENST00000596828 KIF21BO75037 1637 aa16.45■□□□□ 0.22
LINC01440-203ENST00000596828 KDM5BQ9UGL1 1544 aa16.44■□□□□ 0.22
LINC01440-203ENST00000596828 ABCA8O94911 1581 aa16.43■□□□□ 0.22
LINC01440-203ENST00000596828 SAMD9Q5K651 1589 aa16.43■□□□□ 0.22
LINC01440-203ENST00000596828 ARID3CA6NKF2 412 aa16.41■□□□□ 0.22
LINC01440-203ENST00000596828 UBTFP17480 764 aaKnown RBP16.37■□□□□ 0.21
LINC01440-203ENST00000596828 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
LINC01440-203ENST00000596828 GLI2P10070 1586 aa16.36■□□□□ 0.21
LINC01440-203ENST00000596828 KDM6BO15054 1643 aa16.36■□□□□ 0.21
LINC01440-203ENST00000596828 EPRSP07814 1512 aaKnown RBP16.35■□□□□ 0.21
LINC01440-203ENST00000596828 FHOD3Q2V2M9 1422 aa16.35■□□□□ 0.21
LINC01440-203ENST00000596828 RAPGEF6Q8TEU7 1601 aa16.34■□□□□ 0.21
LINC01440-203ENST00000596828 KCNH8Q96L42 1107 aa16.34■□□□□ 0.21
LINC01440-203ENST00000596828 WDR7Q9Y4E6 1490 aa16.34■□□□□ 0.21
LINC01440-203ENST00000596828 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
LINC01440-203ENST00000596828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
LINC01440-203ENST00000596828 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
LINC01440-203ENST00000596828 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
LINC01440-203ENST00000596828 EFCAB5A4FU69 1503 aa16.29■□□□□ 0.2
LINC01440-203ENST00000596828 ATP10BO94823 1461 aa16.29■□□□□ 0.2
LINC01440-203ENST00000596828 CFAP43Q8NDM7 1665 aa16.27■□□□□ 0.2
LINC01440-203ENST00000596828 NUP153P49790 1475 aaKnown RBP16.24■□□□□ 0.19
LINC01440-203ENST00000596828 TEX14Q8IWB6 1497 aa16.22■□□□□ 0.19
LINC01440-203ENST00000596828 CD109Q6YHK3 1445 aa16.21■□□□□ 0.19
LINC01440-203ENST00000596828 ATP1B4Q9UN42 357 aaPredicted RBP16.21■□□□□ 0.19
LINC01440-203ENST00000596828 ARHGAP35Q9NRY4 1499 aa16.2■□□□□ 0.18
LINC01440-203ENST00000596828 COL17A1Q9UMD9 1497 aaPredicted RBP16.18■□□□□ 0.18
LINC01440-203ENST00000596828 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
LINC01440-203ENST00000596828 CDK13Q14004 1512 aaKnown RBP16.16■□□□□ 0.18
LINC01440-203ENST00000596828 MAGI3Q5TCQ9 1506 aa16.15■□□□□ 0.18
LINC01440-203ENST00000596828 CACNB1Q02641 598 aaPredicted RBP16.15■□□□□ 0.18
LINC01440-203ENST00000596828 HECW1Q76N89 1606 aa16.14■□□□□ 0.17
LINC01440-203ENST00000596828 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
LINC01440-203ENST00000596828 FMN1Q68DA7 1419 aa16.13■□□□□ 0.17
LINC01440-203ENST00000596828 PLEKHD1A6NEE1 506 aa16.13■□□□□ 0.17
LINC01440-203ENST00000596828 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
LINC01440-203ENST00000596828 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.16
LINC01440-203ENST00000596828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC01440-203ENST00000596828 PCF11O94913 1555 aaKnown RBP16.06■□□□□ 0.16
LINC01440-203ENST00000596828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC01440-203ENST00000596828 CLIP1P30622 1438 aa16.04■□□□□ 0.16
LINC01440-203ENST00000596828 KDM4FA0A1W2PPD8 638 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms