RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
SIN3B-208ENST00000596638 BIVM-ERCC5R4GMW8 1640 aa13.25□□□□□ -0.29
SIN3B-208ENST00000596638 NUP160Q12769 1436 aa13.24□□□□□ -0.29
SIN3B-208ENST00000596638 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
SIN3B-208ENST00000596638 FHAD1B1AJZ9 1412 aa13.23□□□□□ -0.29
SIN3B-208ENST00000596638 JPH4Q96JJ6 628 aa13.22□□□□□ -0.29
SIN3B-208ENST00000596638 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
SIN3B-208ENST00000596638 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
SIN3B-208ENST00000596638 IGF1RP08069 1367 aa13.2□□□□□ -0.3
SIN3B-208ENST00000596638 MSH5O43196 834 aa13.19□□□□□ -0.3
SIN3B-208ENST00000596638 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
SIN3B-208ENST00000596638 EEA1Q15075 1411 aa13.18□□□□□ -0.3
SIN3B-208ENST00000596638 ERICH3Q5RHP9 1530 aa13.18□□□□□ -0.3
SIN3B-208ENST00000596638 PRG4Q92954 1404 aaPredicted RBP13.13□□□□□ -0.31
SIN3B-208ENST00000596638 TNIKQ9UKE5 1360 aa13.12□□□□□ -0.31
SIN3B-208ENST00000596638 SHROOM2Q13796 1616 aa13.11□□□□□ -0.31
SIN3B-208ENST00000596638 SCAF1Q9H7N4 1312 aaKnown RBP13.07□□□□□ -0.32
SIN3B-208ENST00000596638 KIF27Q86VH2 1401 aa13.06□□□□□ -0.32
SIN3B-208ENST00000596638 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
SIN3B-208ENST00000596638 CARMIL1Q5VZK9 1371 aa13.05□□□□□ -0.32
SIN3B-208ENST00000596638 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
SIN3B-208ENST00000596638 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
SIN3B-208ENST00000596638 CCER1Q8TC90 406 aaPredicted RBP13.03□□□□□ -0.32
SIN3B-208ENST00000596638 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
SIN3B-208ENST00000596638 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
SIN3B-208ENST00000596638 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
SIN3B-208ENST00000596638 ACIN1Q9UKV3 1341 aaKnown RBP12.99□□□□□ -0.33
SIN3B-208ENST00000596638 FAM69CQ0P6D2 419 aa12.99□□□□□ -0.33
SIN3B-208ENST00000596638 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
SIN3B-208ENST00000596638 GOLGA3Q08378 1498 aa12.97□□□□□ -0.33
SIN3B-208ENST00000596638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
SIN3B-208ENST00000596638 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
SIN3B-208ENST00000596638 ILDR1Q86SU0 546 aaPredicted RBP12.96□□□□□ -0.33
SIN3B-208ENST00000596638 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
SIN3B-208ENST00000596638 KIF21BO75037 1637 aa12.94□□□□□ -0.34
SIN3B-208ENST00000596638 PTPRGP23470 1445 aa12.94□□□□□ -0.34
SIN3B-208ENST00000596638 CENPBP07199 599 aaPredicted RBP12.92□□□□□ -0.34
SIN3B-208ENST00000596638 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
SIN3B-208ENST00000596638 ABCC10Q5T3U5 1492 aa12.91□□□□□ -0.34
SIN3B-208ENST00000596638 DIEXFQ68CQ4 756 aaKnown RBP12.91□□□□□ -0.34
SIN3B-208ENST00000596638 CUL7Q14999 1698 aa12.91□□□□□ -0.34
SIN3B-208ENST00000596638 KIF13AQ9H1H9 1805 aa12.9□□□□□ -0.34
SIN3B-208ENST00000596638 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
SIN3B-208ENST00000596638 ADRA2BP18089 450 aa12.88□□□□□ -0.35
SIN3B-208ENST00000596638 DISP1Q96F81 1524 aa12.88□□□□□ -0.35
SIN3B-208ENST00000596638 RAPGEF2Q9Y4G8 1499 aa12.86□□□□□ -0.35
SIN3B-208ENST00000596638 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
SIN3B-208ENST00000596638 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
SIN3B-208ENST00000596638 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
SIN3B-208ENST00000596638 CARMIL2Q6F5E8 1435 aa12.84□□□□□ -0.35
SIN3B-208ENST00000596638 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
SIN3B-208ENST00000596638 DIP2BQ9P265 1576 aa12.82□□□□□ -0.36
SIN3B-208ENST00000596638 UBTFP17480 764 aaKnown RBP12.82□□□□□ -0.36
SIN3B-208ENST00000596638 UACAQ9BZF9 1416 aa12.81□□□□□ -0.36
SIN3B-208ENST00000596638 ASXL2Q76L83 1435 aa12.8□□□□□ -0.36
SIN3B-208ENST00000596638 ABCC2Q92887 1545 aa12.8□□□□□ -0.36
SIN3B-208ENST00000596638 KDM4FA0A1W2PPD8 638 aa12.8□□□□□ -0.36
SIN3B-208ENST00000596638 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
SIN3B-208ENST00000596638 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
SIN3B-208ENST00000596638 UHRF1BP1LA0JNW5 1464 aa12.78□□□□□ -0.36
SIN3B-208ENST00000596638 MYT1Q01538 1121 aa12.78□□□□□ -0.36
SIN3B-208ENST00000596638 CLIP1P30622 1438 aa12.78□□□□□ -0.36
SIN3B-208ENST00000596638 PRXQ9BXM0 1461 aa12.78□□□□□ -0.36
SIN3B-208ENST00000596638 P3H3Q8IVL6 736 aa12.76□□□□□ -0.37
SIN3B-208ENST00000596638 COL17A1Q9UMD9 1497 aaPredicted RBP12.76□□□□□ -0.37
SIN3B-208ENST00000596638 KDM5BQ9UGL1 1544 aa12.75□□□□□ -0.37
SIN3B-208ENST00000596638 PLB1Q6P1J6 1458 aa12.74□□□□□ -0.37
SIN3B-208ENST00000596638 CLSPNQ9HAW4 1339 aa12.74□□□□□ -0.37
SIN3B-208ENST00000596638 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
SIN3B-208ENST00000596638 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
SIN3B-208ENST00000596638 KIAA0556O60303 1618 aa12.71□□□□□ -0.37
SIN3B-208ENST00000596638 KCNH8Q96L42 1107 aa12.71□□□□□ -0.37
SIN3B-208ENST00000596638 EPRSP07814 1512 aaKnown RBP12.71□□□□□ -0.38
SIN3B-208ENST00000596638 GLI2P10070 1586 aa12.7□□□□□ -0.38
SIN3B-208ENST00000596638 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
SIN3B-208ENST00000596638 PPRC1Q5VV67 1664 aaKnown RBP12.69□□□□□ -0.38
SIN3B-208ENST00000596638 KDM6BO15054 1643 aa12.67□□□□□ -0.38
SIN3B-208ENST00000596638 ZCCHC11Q5TAX3 1644 aaKnown RBP12.66□□□□□ -0.38
SIN3B-208ENST00000596638 ABCA8O94911 1581 aa12.65□□□□□ -0.38
SIN3B-208ENST00000596638 RANGAP1P46060 587 aaPredicted RBP12.65□□□□□ -0.38
SIN3B-208ENST00000596638 APLP2Q06481 763 aa12.65□□□□□ -0.38
SIN3B-208ENST00000596638 ATP10BO94823 1461 aa12.63□□□□□ -0.39
SIN3B-208ENST00000596638 WDR7Q9Y4E6 1490 aa12.62□□□□□ -0.39
SIN3B-208ENST00000596638 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
SIN3B-208ENST00000596638 MAP3K4Q9Y6R4 1608 aa12.61□□□□□ -0.39
SIN3B-208ENST00000596638 CD109Q6YHK3 1445 aa12.61□□□□□ -0.39
SIN3B-208ENST00000596638 HNRNPUL2Q1KMD3 747 aaKnown RBP12.59□□□□□ -0.39
SIN3B-208ENST00000596638 RRBP1Q9P2E9 1410 aaKnown RBP12.57□□□□□ -0.4
SIN3B-208ENST00000596638 MIER1Q8N108 512 aa12.57□□□□□ -0.4
SIN3B-208ENST00000596638 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
SIN3B-208ENST00000596638 DHX57Q6P158 1386 aaKnown RBP12.55□□□□□ -0.4
SIN3B-208ENST00000596638 TEX14Q8IWB6 1497 aa12.54□□□□□ -0.4
SIN3B-208ENST00000596638 FHOD3Q2V2M9 1422 aa12.54□□□□□ -0.4
SIN3B-208ENST00000596638 RAPGEF3O95398 923 aa12.53□□□□□ -0.4
SIN3B-208ENST00000596638 SAMD9Q5K651 1589 aa12.52□□□□□ -0.4
SIN3B-208ENST00000596638 ADGRL1O94910 1474 aa12.52□□□□□ -0.41
SIN3B-208ENST00000596638 MAP3K1Q13233 1512 aa12.52□□□□□ -0.41
SIN3B-208ENST00000596638 NUP153P49790 1475 aaKnown RBP12.5□□□□□ -0.41
SIN3B-208ENST00000596638 PLEKHD1A6NEE1 506 aa12.48□□□□□ -0.41
SIN3B-208ENST00000596638 CFAP43Q8NDM7 1665 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms