RNA–Protein interactions for RNA: ENST00000596554.5

C19orf48-206, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 3

Gene C19orf48, Length 727 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-206ENST00000596554 CUL7Q14999 1698 aa22.99■■□□□ 1.27
C19orf48-206ENST00000596554 IGF1RP08069 1367 aa22.96■■□□□ 1.27
C19orf48-206ENST00000596554 KIF27Q86VH2 1401 aa22.95■■□□□ 1.26
C19orf48-206ENST00000596554 KIAA0586Q9BVV6 1533 aa22.95■■□□□ 1.26
C19orf48-206ENST00000596554 AEBP2Q6ZN18 517 aaPredicted RBP22.93■■□□□ 1.26
C19orf48-206ENST00000596554 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
C19orf48-206ENST00000596554 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
C19orf48-206ENST00000596554 ABCC10Q5T3U5 1492 aa22.89■■□□□ 1.25
C19orf48-206ENST00000596554 DIP2BQ9P265 1576 aa22.85■■□□□ 1.25
C19orf48-206ENST00000596554 NPM1P06748 294 aaKnown RBP eCLIP22.83■■□□□ 1.25
C19orf48-206ENST00000596554 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
C19orf48-206ENST00000596554 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
C19orf48-206ENST00000596554 PTPRGP23470 1445 aa22.73■■□□□ 1.23
C19orf48-206ENST00000596554 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
C19orf48-206ENST00000596554 CARMIL2Q6F5E8 1435 aa22.7■■□□□ 1.22
C19orf48-206ENST00000596554 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
C19orf48-206ENST00000596554 TSPOAP1O95153 1857 aa22.68■■□□□ 1.22
C19orf48-206ENST00000596554 ABCC2Q92887 1545 aa22.67■■□□□ 1.22
C19orf48-206ENST00000596554 KDM6BO15054 1643 aa22.67■■□□□ 1.22
C19orf48-206ENST00000596554 UHRF1BP1LA0JNW5 1464 aa22.64■■□□□ 1.21
C19orf48-206ENST00000596554 DISP1Q96F81 1524 aa22.62■■□□□ 1.21
C19orf48-206ENST00000596554 GLI2P10070 1586 aa22.59■■□□□ 1.21
C19orf48-206ENST00000596554 UGGT2Q9NYU1 1516 aa22.59■■□□□ 1.21
C19orf48-206ENST00000596554 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
C19orf48-206ENST00000596554 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
C19orf48-206ENST00000596554 ASXL2Q76L83 1435 aa22.57■■□□□ 1.2
C19orf48-206ENST00000596554 UACAQ9BZF9 1416 aa22.57■■□□□ 1.2
C19orf48-206ENST00000596554 PPRC1Q5VV67 1664 aaKnown RBP22.56■■□□□ 1.2
C19orf48-206ENST00000596554 TTBK1Q5TCY1 1321 aaPredicted RBP22.56■■□□□ 1.2
C19orf48-206ENST00000596554 KDM5BQ9UGL1 1544 aa22.52■■□□□ 1.2
C19orf48-206ENST00000596554 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
C19orf48-206ENST00000596554 ZCCHC11Q5TAX3 1644 aaKnown RBP22.47■■□□□ 1.19
C19orf48-206ENST00000596554 MAP3K4Q9Y6R4 1608 aa22.46■■□□□ 1.19
C19orf48-206ENST00000596554 CTTNBP2Q8WZ74 1663 aa22.46■■□□□ 1.19
C19orf48-206ENST00000596554 KDM4FA0A1W2PPD8 638 aa22.46■■□□□ 1.19
C19orf48-206ENST00000596554 EPRSP07814 1512 aaKnown RBP22.46■■□□□ 1.19
C19orf48-206ENST00000596554 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
C19orf48-206ENST00000596554 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
C19orf48-206ENST00000596554 COL17A1Q9UMD9 1497 aaPredicted RBP22.36■■□□□ 1.17
C19orf48-206ENST00000596554 WDR7Q9Y4E6 1490 aa22.35■■□□□ 1.17
C19orf48-206ENST00000596554 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
C19orf48-206ENST00000596554 ABCA8O94911 1581 aa22.33■■□□□ 1.17
C19orf48-206ENST00000596554 ADGRL1O94910 1474 aa22.28■■□□□ 1.16
C19orf48-206ENST00000596554 CFAP43Q8NDM7 1665 aa22.27■■□□□ 1.16
C19orf48-206ENST00000596554 MAGI3Q5TCQ9 1506 aa22.24■■□□□ 1.15
C19orf48-206ENST00000596554 CD109Q6YHK3 1445 aa22.2■■□□□ 1.14
C19orf48-206ENST00000596554 SAMD9Q5K651 1589 aa22.14■■□□□ 1.13
C19orf48-206ENST00000596554 KCNH8Q96L42 1107 aa22.13■■□□□ 1.13
C19orf48-206ENST00000596554 ATP10BO94823 1461 aa22.11■■□□□ 1.13
C19orf48-206ENST00000596554 ARAP3Q8WWN8 1544 aa22.08■■□□□ 1.13
C19orf48-206ENST00000596554 ABCA9Q8IUA7 1624 aa22.07■■□□□ 1.12
C19orf48-206ENST00000596554 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
C19orf48-206ENST00000596554 CSRNP3Q8WYN3 585 aa22.07■■□□□ 1.12
C19orf48-206ENST00000596554 RAPGEF6Q8TEU7 1601 aa22.06■■□□□ 1.12
C19orf48-206ENST00000596554 P3H3Q8IVL6 736 aa22.05■■□□□ 1.12
C19orf48-206ENST00000596554 HECW2Q9P2P5 1572 aa22.03■■□□□ 1.12
C19orf48-206ENST00000596554 KIF21BO75037 1637 aa22.02■■□□□ 1.11
C19orf48-206ENST00000596554 EEA1Q15075 1411 aa22.01■■□□□ 1.11
C19orf48-206ENST00000596554 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
C19orf48-206ENST00000596554 ARID3CA6NKF2 412 aa22■■□□□ 1.11
C19orf48-206ENST00000596554 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
C19orf48-206ENST00000596554 NEO1Q92859 1461 aa21.96■■□□□ 1.11
C19orf48-206ENST00000596554 FHOD3Q2V2M9 1422 aa21.9■■□□□ 1.1
C19orf48-206ENST00000596554 FRMPD1Q5SYB0 1578 aa21.9■■□□□ 1.1
C19orf48-206ENST00000596554 ILDR1Q86SU0 546 aaPredicted RBP21.89■■□□□ 1.09
C19orf48-206ENST00000596554 ADAMTSL3P82987 1691 aa21.88■■□□□ 1.09
C19orf48-206ENST00000596554 EFCAB5A4FU69 1503 aa21.87■■□□□ 1.09
C19orf48-206ENST00000596554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.85■■□□□ 1.09
C19orf48-206ENST00000596554 RAPGEF3O95398 923 aa21.85■■□□□ 1.09
C19orf48-206ENST00000596554 HNRNPUL2Q1KMD3 747 aaKnown RBP21.85■■□□□ 1.09
C19orf48-206ENST00000596554 BCORL1Q5H9F3 1711 aa21.81■■□□□ 1.08
C19orf48-206ENST00000596554 RICTORQ6R327 1708 aa21.81■■□□□ 1.08
C19orf48-206ENST00000596554 CFAP74Q9C0B2 1584 aa21.8■■□□□ 1.08
C19orf48-206ENST00000596554 PTPRMP28827 1452 aa21.8■■□□□ 1.08
C19orf48-206ENST00000596554 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
C19orf48-206ENST00000596554 PLEKHD1A6NEE1 506 aa21.79■■□□□ 1.08
C19orf48-206ENST00000596554 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.79■■□□□ 1.08not detected■■□□□ 13.5
C19orf48-206ENST00000596554 ARHGEF40Q8TER5 1519 aa21.79■■□□□ 1.08
C19orf48-206ENST00000596554 TTC37Q6PGP7 1564 aa21.77■■□□□ 1.08
C19orf48-206ENST00000596554 DENND4BO75064 1496 aaPredicted RBP21.77■■□□□ 1.07
C19orf48-206ENST00000596554 AKNAQ7Z591 1439 aa21.76■■□□□ 1.07
C19orf48-206ENST00000596554 FANCAO15360 1455 aa21.76■■□□□ 1.07
C19orf48-206ENST00000596554 MADDQ8WXG6 1647 aa21.75■■□□□ 1.07
C19orf48-206ENST00000596554 ZMYM4Q5VZL5 1548 aa21.73■■□□□ 1.07
C19orf48-206ENST00000596554 CDK13Q14004 1512 aaKnown RBP21.71■■□□□ 1.07
C19orf48-206ENST00000596554 ARID4BQ4LE39 1312 aaPredicted RBP21.67■■□□□ 1.06
C19orf48-206ENST00000596554 RIMS1Q86UR5 1692 aaKnown RBP21.66■■□□□ 1.06
C19orf48-206ENST00000596554 HECW1Q76N89 1606 aa21.66■■□□□ 1.06
C19orf48-206ENST00000596554 PCF11O94913 1555 aaKnown RBP21.65■■□□□ 1.06
C19orf48-206ENST00000596554 ZFYVE16Q7Z3T8 1539 aa21.65■■□□□ 1.06
C19orf48-206ENST00000596554 MAGI2Q86UL8 1455 aa21.65■■□□□ 1.06
C19orf48-206ENST00000596554 FMN1Q68DA7 1419 aa21.64■■□□□ 1.06
C19orf48-206ENST00000596554 SIGLEC1Q9BZZ2 1709 aa21.64■■□□□ 1.06
C19orf48-206ENST00000596554 PLCH2O75038 1416 aa21.63■■□□□ 1.05
C19orf48-206ENST00000596554 LMTK3Q96Q04 1460 aa21.63■■□□□ 1.05
C19orf48-206ENST00000596554 ARHGAP35Q9NRY4 1499 aa21.63■■□□□ 1.05
C19orf48-206ENST00000596554 MYO5CQ9NQX4 1742 aa21.62■■□□□ 1.05
C19orf48-206ENST00000596554 YEATS2Q9ULM3 1422 aa21.62■■□□□ 1.05
C19orf48-206ENST00000596554 POGZQ7Z3K3 1410 aa21.61■■□□□ 1.05
C19orf48-206ENST00000596554 SCAPERQ9BY12 1400 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms