RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 ERCC6L2Q5T890 1561 aa25.21■■□□□ 1.63
SCN1B-204ENST00000596348 KIAA0586Q9BVV6 1533 aa25.19■■□□□ 1.62
SCN1B-204ENST00000596348 PRXQ9BXM0 1461 aa25.18■■□□□ 1.62
SCN1B-204ENST00000596348 EEA1Q15075 1411 aa25.14■■□□□ 1.62
SCN1B-204ENST00000596348 CYB5RLQ6IPT4 315 aa25.14■■□□□ 1.62
SCN1B-204ENST00000596348 JPH4Q96JJ6 628 aa25.13■■□□□ 1.61
SCN1B-204ENST00000596348 CSRNP3Q8WYN3 585 aa25.12■■□□□ 1.61
SCN1B-204ENST00000596348 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
SCN1B-204ENST00000596348 IQGAP2Q13576 1575 aa25.07■■□□□ 1.6
SCN1B-204ENST00000596348 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
SCN1B-204ENST00000596348 CTTNBP2Q8WZ74 1663 aa25.01■■□□□ 1.59
SCN1B-204ENST00000596348 UGGT2Q9NYU1 1516 aa24.94■■□□□ 1.58
SCN1B-204ENST00000596348 KIF21BO75037 1637 aa24.94■■□□□ 1.58
SCN1B-204ENST00000596348 DISP1Q96F81 1524 aa24.91■■□□□ 1.58
SCN1B-204ENST00000596348 CARMIL2Q6F5E8 1435 aa24.87■■□□□ 1.57
SCN1B-204ENST00000596348 KIAA0556O60303 1618 aa24.84■■□□□ 1.57
SCN1B-204ENST00000596348 TNIKQ9UKE5 1360 aa24.81■■□□□ 1.56
SCN1B-204ENST00000596348 PTPRGP23470 1445 aa24.8■■□□□ 1.56
SCN1B-204ENST00000596348 GOLGA3Q08378 1498 aa24.77■■□□□ 1.56
SCN1B-204ENST00000596348 ADCY10Q96PN6 1610 aa24.76■■□□□ 1.55
SCN1B-204ENST00000596348 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
SCN1B-204ENST00000596348 TTBK1Q5TCY1 1321 aaPredicted RBP24.76■■□□□ 1.55
SCN1B-204ENST00000596348 SAMD9Q5K651 1589 aa24.7■■□□□ 1.54
SCN1B-204ENST00000596348 UBTFP17480 764 aaKnown RBP24.66■■□□□ 1.54
SCN1B-204ENST00000596348 UACAQ9BZF9 1416 aa24.64■■□□□ 1.54
SCN1B-204ENST00000596348 RANGAP1P46060 587 aaPredicted RBP24.63■■□□□ 1.53
SCN1B-204ENST00000596348 P3H3Q8IVL6 736 aa24.63■■□□□ 1.53
SCN1B-204ENST00000596348 UHRF1BP1LA0JNW5 1464 aa24.63■■□□□ 1.53
SCN1B-204ENST00000596348 ABCC2Q92887 1545 aa24.61■■□□□ 1.53
SCN1B-204ENST00000596348 PLB1Q6P1J6 1458 aa24.6■■□□□ 1.53
SCN1B-204ENST00000596348 TRHP20396 242 aaPredicted RBP24.58■■□□□ 1.53
SCN1B-204ENST00000596348 ABCA8O94911 1581 aa24.57■■□□□ 1.52
SCN1B-204ENST00000596348 EFCAB5A4FU69 1503 aa24.56■■□□□ 1.52
SCN1B-204ENST00000596348 MAPKBP1O60336 1514 aa24.56■■□□□ 1.52
SCN1B-204ENST00000596348 FHOD3Q2V2M9 1422 aa24.55■■□□□ 1.52
SCN1B-204ENST00000596348 NPM1P06748 294 aaKnown RBP eCLIP24.55■■□□□ 1.52
SCN1B-204ENST00000596348 KDM5BQ9UGL1 1544 aa24.52■■□□□ 1.52
SCN1B-204ENST00000596348 ARHGAP35Q9NRY4 1499 aa24.49■■□□□ 1.51
SCN1B-204ENST00000596348 ZCCHC11Q5TAX3 1644 aaKnown RBP24.49■■□□□ 1.51
SCN1B-204ENST00000596348 KIF13AQ9H1H9 1805 aa24.47■■□□□ 1.51
SCN1B-204ENST00000596348 RAPGEF6Q8TEU7 1601 aa24.44■■□□□ 1.5
SCN1B-204ENST00000596348 ABCC10Q5T3U5 1492 aa24.44■■□□□ 1.5
SCN1B-204ENST00000596348 ASXL2Q76L83 1435 aa24.44■■□□□ 1.5
SCN1B-204ENST00000596348 DIP2BQ9P265 1576 aa24.42■■□□□ 1.5
SCN1B-204ENST00000596348 NUP153P49790 1475 aaKnown RBP24.37■■□□□ 1.49
SCN1B-204ENST00000596348 ARID3CA6NKF2 412 aa24.36■■□□□ 1.49
SCN1B-204ENST00000596348 ATP10BO94823 1461 aa24.36■■□□□ 1.49
SCN1B-204ENST00000596348 FAM69CQ0P6D2 419 aa24.35■■□□□ 1.49
SCN1B-204ENST00000596348 LOC105371045A0A1W2PR82 267 aa24.33■■□□□ 1.49
SCN1B-204ENST00000596348 CLIP1P30622 1438 aa24.33■■□□□ 1.49
SCN1B-204ENST00000596348 WDR7Q9Y4E6 1490 aa24.32■■□□□ 1.48
SCN1B-204ENST00000596348 FMN1Q68DA7 1419 aa24.31■■□□□ 1.48
SCN1B-204ENST00000596348 EPRSP07814 1512 aaKnown RBP24.3■■□□□ 1.48
SCN1B-204ENST00000596348 GLI2P10070 1586 aa24.28■■□□□ 1.48
SCN1B-204ENST00000596348 CEP162Q5TB80 1403 aa24.25■■□□□ 1.47
SCN1B-204ENST00000596348 TSPOAP1O95153 1857 aa24.23■■□□□ 1.47
SCN1B-204ENST00000596348 HECW1Q76N89 1606 aa24.22■■□□□ 1.47
SCN1B-204ENST00000596348 CDK13Q14004 1512 aaKnown RBP24.21■■□□□ 1.47
SCN1B-204ENST00000596348 PCF11O94913 1555 aaKnown RBP24.2■■□□□ 1.47
SCN1B-204ENST00000596348 MAP3K4Q9Y6R4 1608 aa24.19■■□□□ 1.46
SCN1B-204ENST00000596348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.18■■□□□ 1.46
SCN1B-204ENST00000596348 HNRNPUL2Q1KMD3 747 aaKnown RBP24.18■■□□□ 1.46
SCN1B-204ENST00000596348 LRRIQ1Q96JM4 1722 aa24.18■■□□□ 1.46
SCN1B-204ENST00000596348 PPRC1Q5VV67 1664 aaKnown RBP24.18■■□□□ 1.46
SCN1B-204ENST00000596348 KCNH8Q96L42 1107 aa24.17■■□□□ 1.46
SCN1B-204ENST00000596348 CASKIN1Q8WXD9 1431 aa24.16■■□□□ 1.46
SCN1B-204ENST00000596348 ATP1B4Q9UN42 357 aaPredicted RBP24.15■■□□□ 1.46
SCN1B-204ENST00000596348 FYCO1Q9BQS8 1478 aa24.11■■□□□ 1.45
SCN1B-204ENST00000596348 CFAP43Q8NDM7 1665 aa24.11■■□□□ 1.45
SCN1B-204ENST00000596348 ABCA9Q8IUA7 1624 aa24.09■■□□□ 1.45
SCN1B-204ENST00000596348 PLEKHD1A6NEE1 506 aa24.08■■□□□ 1.45
SCN1B-204ENST00000596348 CD109Q6YHK3 1445 aa24.07■■□□□ 1.44
SCN1B-204ENST00000596348 CCDC18Q5T9S5 1454 aa24.04■■□□□ 1.44
SCN1B-204ENST00000596348 MAGI3Q5TCQ9 1506 aa24.03■■□□□ 1.44
SCN1B-204ENST00000596348 TEX14Q8IWB6 1497 aa24.01■■□□□ 1.43
SCN1B-204ENST00000596348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.43
SCN1B-204ENST00000596348 KDM6BO15054 1643 aa23.99■■□□□ 1.43
SCN1B-204ENST00000596348 TTC37Q6PGP7 1564 aa23.99■■□□□ 1.43
SCN1B-204ENST00000596348 TROQ12816 1431 aaPredicted RBP23.98■■□□□ 1.43
SCN1B-204ENST00000596348 CDK11AQ9UQ88 783 aaPredicted RBP23.97■■□□□ 1.43
SCN1B-204ENST00000596348 KIF14Q15058 1648 aa23.96■■□□□ 1.43
SCN1B-204ENST00000596348 COL17A1Q9UMD9 1497 aaPredicted RBP23.94■■□□□ 1.42
SCN1B-204ENST00000596348 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
SCN1B-204ENST00000596348 NEO1Q92859 1461 aa23.85■■□□□ 1.41
SCN1B-204ENST00000596348 MYO5CQ9NQX4 1742 aa23.84■■□□□ 1.41
SCN1B-204ENST00000596348 ARAP3Q8WWN8 1544 aa23.83■■□□□ 1.41
SCN1B-204ENST00000596348 PLCH2O75038 1416 aa23.83■■□□□ 1.4
SCN1B-204ENST00000596348 FANCAO15360 1455 aa23.82■■□□□ 1.4
SCN1B-204ENST00000596348 PHLDB1Q86UU1 1377 aa23.8■■□□□ 1.4
SCN1B-204ENST00000596348 TIAM1Q13009 1591 aa23.8■■□□□ 1.4
SCN1B-204ENST00000596348 MTUS2Q5JR59 1369 aa23.79■■□□□ 1.4
SCN1B-204ENST00000596348 CFAP74Q9C0B2 1584 aa23.78■■□□□ 1.4
SCN1B-204ENST00000596348 EHBP1L1Q8N3D4 1523 aa23.77■■□□□ 1.4
SCN1B-204ENST00000596348 AKNAQ7Z591 1439 aa23.76■■□□□ 1.39
SCN1B-204ENST00000596348 CDC42BPBQ9Y5S2 1711 aa23.76■■□□□ 1.39
SCN1B-204ENST00000596348 PREX2Q70Z35 1606 aa23.75■■□□□ 1.39
SCN1B-204ENST00000596348 CDC42BPAQ5VT25 1732 aa23.75■■□□□ 1.39
SCN1B-204ENST00000596348 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
SCN1B-204ENST00000596348 ARHGAP5Q13017 1502 aa23.73■■□□□ 1.39
SCN1B-204ENST00000596348 MAP3K1Q13233 1512 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms