RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 RUSC2Q8N2Y8 1516 aa17.73■□□□□ 0.43
SHKBP1-210ENST00000595874 JPH4Q96JJ6 628 aa17.73■□□□□ 0.43
SHKBP1-210ENST00000595874 CUL7Q14999 1698 aa17.71■□□□□ 0.42
SHKBP1-210ENST00000595874 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
SHKBP1-210ENST00000595874 KIAA0586Q9BVV6 1533 aa17.6■□□□□ 0.41
SHKBP1-210ENST00000595874 RAPGEF2Q9Y4G8 1499 aa17.52■□□□□ 0.4
SHKBP1-210ENST00000595874 ADCY10Q96PN6 1610 aa17.52■□□□□ 0.4
SHKBP1-210ENST00000595874 IQGAP2Q13576 1575 aa17.52■□□□□ 0.39
SHKBP1-210ENST00000595874 NPM1P06748 294 aaKnown RBP eCLIP17.5■□□□□ 0.39
SHKBP1-210ENST00000595874 PTPRGP23470 1445 aa17.47■□□□□ 0.39
SHKBP1-210ENST00000595874 KIF13AQ9H1H9 1805 aa17.47■□□□□ 0.39
SHKBP1-210ENST00000595874 FAM9AQ8IZU1 332 aaPredicted RBP17.47■□□□□ 0.39
SHKBP1-210ENST00000595874 CARMIL2Q6F5E8 1435 aa17.45■□□□□ 0.38
SHKBP1-210ENST00000595874 FAM69CQ0P6D2 419 aa17.44■□□□□ 0.38
SHKBP1-210ENST00000595874 TNIKQ9UKE5 1360 aa17.43■□□□□ 0.38
SHKBP1-210ENST00000595874 DISP1Q96F81 1524 aa17.42■□□□□ 0.38
SHKBP1-210ENST00000595874 EHMT2Q96KQ7 1210 aa17.42■□□□□ 0.38
SHKBP1-210ENST00000595874 CTTNBP2Q8WZ74 1663 aa17.42■□□□□ 0.38
SHKBP1-210ENST00000595874 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
SHKBP1-210ENST00000595874 TSPOAP1O95153 1857 aa17.39■□□□□ 0.37
SHKBP1-210ENST00000595874 P3H3Q8IVL6 736 aa17.38■□□□□ 0.37
SHKBP1-210ENST00000595874 KIAA0556O60303 1618 aa17.38■□□□□ 0.37
SHKBP1-210ENST00000595874 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
SHKBP1-210ENST00000595874 DIP2BQ9P265 1576 aa17.36■□□□□ 0.37
SHKBP1-210ENST00000595874 ABCC10Q5T3U5 1492 aa17.35■□□□□ 0.37
SHKBP1-210ENST00000595874 MAPKBP1O60336 1514 aa17.35■□□□□ 0.37
SHKBP1-210ENST00000595874 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
SHKBP1-210ENST00000595874 ARID3CA6NKF2 412 aa17.33■□□□□ 0.36
SHKBP1-210ENST00000595874 CSRNP3Q8WYN3 585 aa17.33■□□□□ 0.36
SHKBP1-210ENST00000595874 UACAQ9BZF9 1416 aa17.32■□□□□ 0.36
SHKBP1-210ENST00000595874 ABCC2Q92887 1545 aa17.31■□□□□ 0.36
SHKBP1-210ENST00000595874 ASXL2Q76L83 1435 aa17.29■□□□□ 0.36
SHKBP1-210ENST00000595874 PLB1Q6P1J6 1458 aa17.28■□□□□ 0.36
SHKBP1-210ENST00000595874 ZCCHC11Q5TAX3 1644 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-210ENST00000595874 UHRF1BP1LA0JNW5 1464 aa17.24■□□□□ 0.35
SHKBP1-210ENST00000595874 CHIC1Q5VXU3 224 aa17.24■□□□□ 0.35
SHKBP1-210ENST00000595874 GOLGA3Q08378 1498 aa17.23■□□□□ 0.35
SHKBP1-210ENST00000595874 AEBP2Q6ZN18 517 aaPredicted RBP17.22■□□□□ 0.35
SHKBP1-210ENST00000595874 KCNH8Q96L42 1107 aa17.2■□□□□ 0.34
SHKBP1-210ENST00000595874 KDM6BO15054 1643 aa17.2■□□□□ 0.34
SHKBP1-210ENST00000595874 KDM5BQ9UGL1 1544 aa17.19■□□□□ 0.34
SHKBP1-210ENST00000595874 ABCA8O94911 1581 aa17.17■□□□□ 0.34
SHKBP1-210ENST00000595874 PPRC1Q5VV67 1664 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-210ENST00000595874 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-210ENST00000595874 EEA1Q15075 1411 aa17.16■□□□□ 0.34
SHKBP1-210ENST00000595874 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
SHKBP1-210ENST00000595874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-210ENST00000595874 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-210ENST00000595874 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
SHKBP1-210ENST00000595874 GLI2P10070 1586 aa17.11■□□□□ 0.33
SHKBP1-210ENST00000595874 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
SHKBP1-210ENST00000595874 UBTFP17480 764 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-210ENST00000595874 MAP3K4Q9Y6R4 1608 aa17.1■□□□□ 0.33
SHKBP1-210ENST00000595874 KIF21BO75037 1637 aa17.09■□□□□ 0.33
SHKBP1-210ENST00000595874 RAPGEF6Q8TEU7 1601 aa17.07■□□□□ 0.32
SHKBP1-210ENST00000595874 ATP10BO94823 1461 aa17.05■□□□□ 0.32
SHKBP1-210ENST00000595874 ATP1B4Q9UN42 357 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-210ENST00000595874 COL17A1Q9UMD9 1497 aaPredicted RBP17.04■□□□□ 0.32
SHKBP1-210ENST00000595874 CD109Q6YHK3 1445 aa17.02■□□□□ 0.31
SHKBP1-210ENST00000595874 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
SHKBP1-210ENST00000595874 TEX14Q8IWB6 1497 aa16.99■□□□□ 0.31
SHKBP1-210ENST00000595874 NUP153P49790 1475 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-210ENST00000595874 KDM4FA0A1W2PPD8 638 aa16.96■□□□□ 0.31
SHKBP1-210ENST00000595874 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
SHKBP1-210ENST00000595874 CDK13Q14004 1512 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-210ENST00000595874 ARHGAP35Q9NRY4 1499 aa16.92■□□□□ 0.3
SHKBP1-210ENST00000595874 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
SHKBP1-210ENST00000595874 PLEKHD1A6NEE1 506 aa16.89■□□□□ 0.29
SHKBP1-210ENST00000595874 ABCA9Q8IUA7 1624 aa16.88■□□□□ 0.29
SHKBP1-210ENST00000595874 ADGRL1O94910 1474 aa16.87■□□□□ 0.29
SHKBP1-210ENST00000595874 RAPGEF3O95398 923 aa16.85■□□□□ 0.29
SHKBP1-210ENST00000595874 TTC37Q6PGP7 1564 aa16.83■□□□□ 0.28
SHKBP1-210ENST00000595874 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
SHKBP1-210ENST00000595874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.81■□□□□ 0.28
SHKBP1-210ENST00000595874 LRRIQ1Q96JM4 1722 aa16.81■□□□□ 0.28
SHKBP1-210ENST00000595874 FMN1Q68DA7 1419 aa16.8■□□□□ 0.28
SHKBP1-210ENST00000595874 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-210ENST00000595874 ARAP3Q8WWN8 1544 aa16.76■□□□□ 0.27
SHKBP1-210ENST00000595874 KIF14Q15058 1648 aa16.76■□□□□ 0.27
SHKBP1-210ENST00000595874 FRMPD1Q5SYB0 1578 aa16.75■□□□□ 0.27
SHKBP1-210ENST00000595874 NEO1Q92859 1461 aa16.74■□□□□ 0.27
SHKBP1-210ENST00000595874 FANCAO15360 1455 aa16.73■□□□□ 0.27
SHKBP1-210ENST00000595874 AKNAQ7Z591 1439 aa16.73■□□□□ 0.27
SHKBP1-210ENST00000595874 ARID4BQ4LE39 1312 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-210ENST00000595874 CLIP1P30622 1438 aa16.72■□□□□ 0.27
SHKBP1-210ENST00000595874 PLPPR3Q6T4P5 718 aa16.71■□□□□ 0.27
SHKBP1-210ENST00000595874 DENND4BO75064 1496 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-210ENST00000595874 CDK11AQ9UQ88 783 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-210ENST00000595874 RICTORQ6R327 1708 aa16.68■□□□□ 0.26
SHKBP1-210ENST00000595874 MYO5CQ9NQX4 1742 aa16.68■□□□□ 0.26
SHKBP1-210ENST00000595874 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
SHKBP1-210ENST00000595874 PHLDB1Q86UU1 1377 aa16.67■□□□□ 0.26
SHKBP1-210ENST00000595874 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
SHKBP1-210ENST00000595874 TROQ12816 1431 aaPredicted RBP16.67■□□□□ 0.26
SHKBP1-210ENST00000595874 CASKIN1Q8WXD9 1431 aa16.66■□□□□ 0.26
SHKBP1-210ENST00000595874 SCAPERQ9BY12 1400 aa16.66■□□□□ 0.26
SHKBP1-210ENST00000595874 PLCH2O75038 1416 aa16.65■□□□□ 0.26
SHKBP1-210ENST00000595874 MYT1LQ9UL68 1186 aa16.65■□□□□ 0.26
SHKBP1-210ENST00000595874 ARHGAP5Q13017 1502 aa16.65■□□□□ 0.26
SHKBP1-210ENST00000595874 MLECQ14165 292 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms