RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 EEA1Q15075 1411 aa21.38■■□□□ 1.01
SHKBP1-209ENST00000595803 FAM69CQ0P6D2 419 aa21.36■■□□□ 1.01
SHKBP1-209ENST00000595803 RUSC2Q8N2Y8 1516 aa21.35■■□□□ 1.01
SHKBP1-209ENST00000595803 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
SHKBP1-209ENST00000595803 CSRNP3Q8WYN3 585 aa21.35■■□□□ 1.01
SHKBP1-209ENST00000595803 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
SHKBP1-209ENST00000595803 DIP2BQ9P265 1576 aa21.35■■□□□ 1.01
SHKBP1-209ENST00000595803 KIF27Q86VH2 1401 aa21.32■■□□□ 1
SHKBP1-209ENST00000595803 MAPKBP1O60336 1514 aa21.3■■□□□ 1
SHKBP1-209ENST00000595803 LOC105371045A0A1W2PR82 267 aa21.25■□□□□ 0.99
SHKBP1-209ENST00000595803 PRG4Q92954 1404 aaPredicted RBP21.25■□□□□ 0.99
SHKBP1-209ENST00000595803 HECW2Q9P2P5 1572 aa21.22■□□□□ 0.99
SHKBP1-209ENST00000595803 TSPOAP1O95153 1857 aa21.2■□□□□ 0.98
SHKBP1-209ENST00000595803 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
SHKBP1-209ENST00000595803 FHAD1B1AJZ9 1412 aa21.19■□□□□ 0.98
SHKBP1-209ENST00000595803 ADGRL1O94910 1474 aa21.19■□□□□ 0.98
SHKBP1-209ENST00000595803 ADCY10Q96PN6 1610 aa21.18■□□□□ 0.98
SHKBP1-209ENST00000595803 IGF1RP08069 1367 aa21.16■□□□□ 0.98
SHKBP1-209ENST00000595803 NPM1P06748 294 aaKnown RBP eCLIP21.16■□□□□ 0.98
SHKBP1-209ENST00000595803 JPH4Q96JJ6 628 aa21.09■□□□□ 0.97
SHKBP1-209ENST00000595803 UBTFP17480 764 aaKnown RBP21.07■□□□□ 0.96
SHKBP1-209ENST00000595803 ERICH3Q5RHP9 1530 aa21.07■□□□□ 0.96
SHKBP1-209ENST00000595803 CARMIL1Q5VZK9 1371 aa21.07■□□□□ 0.96
SHKBP1-209ENST00000595803 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
SHKBP1-209ENST00000595803 PRXQ9BXM0 1461 aa21.04■□□□□ 0.96
SHKBP1-209ENST00000595803 KIF21BO75037 1637 aa21.04■□□□□ 0.96
SHKBP1-209ENST00000595803 PPRC1Q5VV67 1664 aaKnown RBP20.99■□□□□ 0.95
SHKBP1-209ENST00000595803 FBXO41Q8TF61 875 aa20.99■□□□□ 0.95
SHKBP1-209ENST00000595803 RAPGEF2Q9Y4G8 1499 aa20.99■□□□□ 0.95
SHKBP1-209ENST00000595803 CUL7Q14999 1698 aa20.96■□□□□ 0.95
SHKBP1-209ENST00000595803 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.94
SHKBP1-209ENST00000595803 COL17A1Q9UMD9 1497 aaPredicted RBP20.89■□□□□ 0.94
SHKBP1-209ENST00000595803 GLI2P10070 1586 aa20.88■□□□□ 0.93
SHKBP1-209ENST00000595803 ASXL2Q76L83 1435 aa20.84■□□□□ 0.93
SHKBP1-209ENST00000595803 ABCC2Q92887 1545 aa20.83■□□□□ 0.92
SHKBP1-209ENST00000595803 PLB1Q6P1J6 1458 aa20.81■□□□□ 0.92
SHKBP1-209ENST00000595803 KIAA0586Q9BVV6 1533 aa20.8■□□□□ 0.92
SHKBP1-209ENST00000595803 RANGAP1P46060 587 aaPredicted RBP20.8■□□□□ 0.92
SHKBP1-209ENST00000595803 MAP3K4Q9Y6R4 1608 aa20.77■□□□□ 0.92
SHKBP1-209ENST00000595803 PTPRGP23470 1445 aa20.77■□□□□ 0.91
SHKBP1-209ENST00000595803 CEP162Q5TB80 1403 aa20.76■□□□□ 0.91
SHKBP1-209ENST00000595803 LMTK3Q96Q04 1460 aa20.75■□□□□ 0.91
SHKBP1-209ENST00000595803 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
SHKBP1-209ENST00000595803 EPRSP07814 1512 aaKnown RBP20.72■□□□□ 0.91
SHKBP1-209ENST00000595803 TTBK1Q5TCY1 1321 aaPredicted RBP20.71■□□□□ 0.91
SHKBP1-209ENST00000595803 CLIP1P30622 1438 aa20.7■□□□□ 0.9
SHKBP1-209ENST00000595803 UHRF1BP1LA0JNW5 1464 aa20.67■□□□□ 0.9
SHKBP1-209ENST00000595803 CTTNBP2Q8WZ74 1663 aa20.66■□□□□ 0.9
SHKBP1-209ENST00000595803 CARMIL2Q6F5E8 1435 aa20.61■□□□□ 0.89
SHKBP1-209ENST00000595803 UACAQ9BZF9 1416 aa20.6■□□□□ 0.89
SHKBP1-209ENST00000595803 KDM5BQ9UGL1 1544 aa20.59■□□□□ 0.89
SHKBP1-209ENST00000595803 ZCCHC11Q5TAX3 1644 aaKnown RBP20.57■□□□□ 0.88
SHKBP1-209ENST00000595803 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
SHKBP1-209ENST00000595803 IQGAP2Q13576 1575 aa20.56■□□□□ 0.88
SHKBP1-209ENST00000595803 ARHGAP35Q9NRY4 1499 aa20.54■□□□□ 0.88
SHKBP1-209ENST00000595803 PTPRMP28827 1452 aa20.52■□□□□ 0.88
SHKBP1-209ENST00000595803 SOCS7O14512 581 aa20.51■□□□□ 0.87
SHKBP1-209ENST00000595803 PCF11O94913 1555 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-209ENST00000595803 WDR7Q9Y4E6 1490 aa20.5■□□□□ 0.87
SHKBP1-209ENST00000595803 EFCAB5A4FU69 1503 aa20.5■□□□□ 0.87
SHKBP1-209ENST00000595803 ILDR2Q71H61 639 aa20.5■□□□□ 0.87
SHKBP1-209ENST00000595803 MAGI3Q5TCQ9 1506 aa20.48■□□□□ 0.87
SHKBP1-209ENST00000595803 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
SHKBP1-209ENST00000595803 UGGT2Q9NYU1 1516 aa20.48■□□□□ 0.87
SHKBP1-209ENST00000595803 ADAMTSL3P82987 1691 aa20.47■□□□□ 0.87
SHKBP1-209ENST00000595803 VPS8Q8N3P4 1428 aa20.45■□□□□ 0.86
SHKBP1-209ENST00000595803 CFAP43Q8NDM7 1665 aa20.45■□□□□ 0.86
SHKBP1-209ENST00000595803 DISP3Q9P2K9 1392 aa20.45■□□□□ 0.86
SHKBP1-209ENST00000595803 FHOD3Q2V2M9 1422 aa20.44■□□□□ 0.86
SHKBP1-209ENST00000595803 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
SHKBP1-209ENST00000595803 SAMD9Q5K651 1589 aa20.42■□□□□ 0.86
SHKBP1-209ENST00000595803 APLP2Q06481 763 aa20.42■□□□□ 0.86
SHKBP1-209ENST00000595803 ATP1B4Q9UN42 357 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-209ENST00000595803 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
SHKBP1-209ENST00000595803 MADDQ8WXG6 1647 aa20.36■□□□□ 0.85
SHKBP1-209ENST00000595803 KIAA0556O60303 1618 aa20.35■□□□□ 0.85
SHKBP1-209ENST00000595803 ARAP3Q8WWN8 1544 aa20.34■□□□□ 0.85
SHKBP1-209ENST00000595803 BCORL1Q5H9F3 1711 aa20.33■□□□□ 0.85
SHKBP1-209ENST00000595803 CERKQ8TCT0 537 aa20.32■□□□□ 0.84
SHKBP1-209ENST00000595803 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-209ENST00000595803 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
SHKBP1-209ENST00000595803 SPATA31D1Q6ZQQ2 1576 aa20.29■□□□□ 0.84
SHKBP1-209ENST00000595803 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.84
SHKBP1-209ENST00000595803 HSPA2P54652 639 aa20.26■□□□□ 0.83
SHKBP1-209ENST00000595803 RIMS1Q86UR5 1692 aaKnown RBP20.25■□□□□ 0.83
SHKBP1-209ENST00000595803 FYCO1Q9BQS8 1478 aa20.23■□□□□ 0.83
SHKBP1-209ENST00000595803 ABCA8O94911 1581 aa20.2■□□□□ 0.82
SHKBP1-209ENST00000595803 FRMPD1Q5SYB0 1578 aa20.19■□□□□ 0.82
SHKBP1-209ENST00000595803 ARID4BQ4LE39 1312 aaPredicted RBP20.19■□□□□ 0.82
SHKBP1-209ENST00000595803 RAPGEF3O95398 923 aa20.16■□□□□ 0.82
SHKBP1-209ENST00000595803 MAP3K1Q13233 1512 aa20.16■□□□□ 0.82
SHKBP1-209ENST00000595803 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
SHKBP1-209ENST00000595803 ARHGEF40Q8TER5 1519 aa20.14■□□□□ 0.81
SHKBP1-209ENST00000595803 KANK4Q5T7N3 995 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-209ENST00000595803 HECW1Q76N89 1606 aa20.13■□□□□ 0.81
SHKBP1-209ENST00000595803 RAPGEF6Q8TEU7 1601 aa20.13■□□□□ 0.81
SHKBP1-209ENST00000595803 ARID3CA6NKF2 412 aa20.13■□□□□ 0.81
SHKBP1-209ENST00000595803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-209ENST00000595803 HNRNPUL2Q1KMD3 747 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-209ENST00000595803 ABCA9Q8IUA7 1624 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms