RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 RAPGEF2Q9Y4G8 1499 aa36.91■■■■□ 3.5
HOMER3-206ENST00000594439 ERCC6L2Q5T890 1561 aa36.91■■■■□ 3.5
HOMER3-206ENST00000594439 KIAA0586Q9BVV6 1533 aa36.9■■■■□ 3.5
HOMER3-206ENST00000594439 JPH4Q96JJ6 628 aa36.86■■■■□ 3.49
HOMER3-206ENST00000594439 PRXQ9BXM0 1461 aa36.82■■■■□ 3.48
HOMER3-206ENST00000594439 PRG4Q92954 1404 aaPredicted RBP36.8■■■■□ 3.48
HOMER3-206ENST00000594439 EEA1Q15075 1411 aa36.78■■■■□ 3.48
HOMER3-206ENST00000594439 CSRNP3Q8WYN3 585 aa36.74■■■■□ 3.47
HOMER3-206ENST00000594439 IQGAP2Q13576 1575 aa36.7■■■■□ 3.46
HOMER3-206ENST00000594439 FAM9AQ8IZU1 332 aaPredicted RBP36.61■■■■□ 3.45
HOMER3-206ENST00000594439 CTTNBP2Q8WZ74 1663 aa36.61■■■■□ 3.45
HOMER3-206ENST00000594439 UGGT2Q9NYU1 1516 aa36.52■■■■□ 3.44
HOMER3-206ENST00000594439 CARMIL2Q6F5E8 1435 aa36.48■■■■□ 3.43
HOMER3-206ENST00000594439 DISP1Q96F81 1524 aa36.46■■■■□ 3.43
HOMER3-206ENST00000594439 KIF21BO75037 1637 aa36.45■■■■□ 3.42
HOMER3-206ENST00000594439 TNIKQ9UKE5 1360 aa36.38■■■■□ 3.41
HOMER3-206ENST00000594439 KIAA0556O60303 1618 aa36.37■■■■□ 3.41
HOMER3-206ENST00000594439 PTPRGP23470 1445 aa36.34■■■■□ 3.41
HOMER3-206ENST00000594439 GOLGA3Q08378 1498 aa36.28■■■■□ 3.4
HOMER3-206ENST00000594439 ADCY10Q96PN6 1610 aa36.27■■■■□ 3.4
HOMER3-206ENST00000594439 TTBK1Q5TCY1 1321 aaPredicted RBP36.25■■■■□ 3.39
HOMER3-206ENST00000594439 TRHP20396 242 aaPredicted RBP36.14■■■■□ 3.38
HOMER3-206ENST00000594439 SAMD9Q5K651 1589 aa36.14■■■■□ 3.38
HOMER3-206ENST00000594439 UACAQ9BZF9 1416 aa36.12■■■■□ 3.37
HOMER3-206ENST00000594439 EHMT2Q96KQ7 1210 aa36.12■■■■□ 3.37
HOMER3-206ENST00000594439 UHRF1BP1LA0JNW5 1464 aa36.11■■■■□ 3.37
HOMER3-206ENST00000594439 NPM1P06748 294 aaKnown RBP eCLIP36.08■■■■□ 3.37
HOMER3-206ENST00000594439 ABCC2Q92887 1545 aa36.07■■■■□ 3.36
HOMER3-206ENST00000594439 UBTFP17480 764 aaKnown RBP36.06■■■■□ 3.36
HOMER3-206ENST00000594439 MAPKBP1O60336 1514 aa36.03■■■■□ 3.36
HOMER3-206ENST00000594439 P3H3Q8IVL6 736 aa36.03■■■■□ 3.36
HOMER3-206ENST00000594439 RANGAP1P46060 587 aaPredicted RBP36■■■■□ 3.35
HOMER3-206ENST00000594439 PLB1Q6P1J6 1458 aa35.99■■■■□ 3.35
HOMER3-206ENST00000594439 ABCA8O94911 1581 aa35.98■■■■□ 3.35
HOMER3-206ENST00000594439 EFCAB5A4FU69 1503 aa35.95■■■■□ 3.35
HOMER3-206ENST00000594439 KDM5BQ9UGL1 1544 aa35.93■■■■□ 3.34
HOMER3-206ENST00000594439 KIF13AQ9H1H9 1805 aa35.9■■■■□ 3.34
HOMER3-206ENST00000594439 FHOD3Q2V2M9 1422 aa35.89■■■■□ 3.34
HOMER3-206ENST00000594439 ZCCHC11Q5TAX3 1644 aaKnown RBP35.87■■■■□ 3.33
HOMER3-206ENST00000594439 ABCC10Q5T3U5 1492 aa35.86■■■■□ 3.33
HOMER3-206ENST00000594439 DIP2BQ9P265 1576 aa35.82■■■■□ 3.32
HOMER3-206ENST00000594439 ASXL2Q76L83 1435 aa35.81■■■■□ 3.32
HOMER3-206ENST00000594439 ARHGAP35Q9NRY4 1499 aa35.79■■■■□ 3.32
HOMER3-206ENST00000594439 RAPGEF6Q8TEU7 1601 aa35.78■■■■□ 3.32
HOMER3-206ENST00000594439 FAM69CQ0P6D2 419 aa35.75■■■■□ 3.31
HOMER3-206ENST00000594439 ATP10BO94823 1461 aa35.67■■■■□ 3.3
HOMER3-206ENST00000594439 NUP153P49790 1475 aaKnown RBP35.64■■■■□ 3.3
HOMER3-206ENST00000594439 WDR7Q9Y4E6 1490 aa35.63■■■■□ 3.29
HOMER3-206ENST00000594439 GLI2P10070 1586 aa35.63■■■■□ 3.29
HOMER3-206ENST00000594439 ARID3CA6NKF2 412 aa35.62■■■■□ 3.29
HOMER3-206ENST00000594439 EPRSP07814 1512 aaKnown RBP35.62■■■■□ 3.29
HOMER3-206ENST00000594439 FMN1Q68DA7 1419 aa35.58■■■■□ 3.29
HOMER3-206ENST00000594439 CLIP1P30622 1438 aa35.54■■■■□ 3.28
HOMER3-206ENST00000594439 TSPOAP1O95153 1857 aa35.52■■■■□ 3.28
HOMER3-206ENST00000594439 MAP3K4Q9Y6R4 1608 aa35.47■■■■□ 3.27
HOMER3-206ENST00000594439 LOC105371045A0A1W2PR82 267 aa35.46■■■■□ 3.27
HOMER3-206ENST00000594439 HECW1Q76N89 1606 aa35.45■■■■□ 3.27
HOMER3-206ENST00000594439 PPRC1Q5VV67 1664 aaKnown RBP35.44■■■■□ 3.26
HOMER3-206ENST00000594439 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.43■■■■□ 3.26
HOMER3-206ENST00000594439 HNRNPUL2Q1KMD3 747 aaKnown RBP35.43■■■■□ 3.26
HOMER3-206ENST00000594439 KCNH8Q96L42 1107 aa35.43■■■■□ 3.26
HOMER3-206ENST00000594439 CDK13Q14004 1512 aaKnown RBP35.39■■■■□ 3.26
HOMER3-206ENST00000594439 CEP162Q5TB80 1403 aa35.39■■■■□ 3.26
HOMER3-206ENST00000594439 CFAP43Q8NDM7 1665 aa35.37■■■■□ 3.25
HOMER3-206ENST00000594439 PCF11O94913 1555 aaKnown RBP35.35■■■■□ 3.25
HOMER3-206ENST00000594439 ATP1B4Q9UN42 357 aaPredicted RBP35.35■■■■□ 3.25
HOMER3-206ENST00000594439 CASKIN1Q8WXD9 1431 aa35.33■■■■□ 3.25
HOMER3-206ENST00000594439 LRRIQ1Q96JM4 1722 aa35.32■■■■□ 3.25
HOMER3-206ENST00000594439 PLEKHD1A6NEE1 506 aa35.31■■■■□ 3.24
HOMER3-206ENST00000594439 CD109Q6YHK3 1445 aa35.29■■■■□ 3.24
HOMER3-206ENST00000594439 ABCA9Q8IUA7 1624 aa35.28■■■■□ 3.24
HOMER3-206ENST00000594439 TEX14Q8IWB6 1497 aa35.25■■■■□ 3.23
HOMER3-206ENST00000594439 MAGI3Q5TCQ9 1506 aa35.25■■■■□ 3.23
HOMER3-206ENST00000594439 FYCO1Q9BQS8 1478 aa35.24■■■■□ 3.23
HOMER3-206ENST00000594439 KDM6BO15054 1643 aa35.23■■■■□ 3.23
HOMER3-206ENST00000594439 CCDC18Q5T9S5 1454 aa35.18■■■■□ 3.22
HOMER3-206ENST00000594439 CDK11AQ9UQ88 783 aaPredicted RBP35.15■■■■□ 3.22
HOMER3-206ENST00000594439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.13■■■■□ 3.21
HOMER3-206ENST00000594439 TROQ12816 1431 aaPredicted RBP35.1■■■■□ 3.21
HOMER3-206ENST00000594439 TTC37Q6PGP7 1564 aa35.09■■■■□ 3.21
HOMER3-206ENST00000594439 COL17A1Q9UMD9 1497 aaPredicted RBP35.09■■■■□ 3.21
HOMER3-206ENST00000594439 KIF14Q15058 1648 aa35.04■■■■□ 3.2
HOMER3-206ENST00000594439 NEO1Q92859 1461 aa34.97■■■■□ 3.19
HOMER3-206ENST00000594439 VPS8Q8N3P4 1428 aa34.97■■■■□ 3.19
HOMER3-206ENST00000594439 PHLDB1Q86UU1 1377 aa34.95■■■■□ 3.19
HOMER3-206ENST00000594439 ARAP3Q8WWN8 1544 aa34.95■■■■□ 3.19
HOMER3-206ENST00000594439 MYO5CQ9NQX4 1742 aa34.92■■■■□ 3.18
HOMER3-206ENST00000594439 PLCH2O75038 1416 aa34.9■■■■□ 3.18
HOMER3-206ENST00000594439 FANCAO15360 1455 aa34.89■■■■□ 3.18
HOMER3-206ENST00000594439 CFAP74Q9C0B2 1584 aa34.88■■■■□ 3.17
HOMER3-206ENST00000594439 AKNAQ7Z591 1439 aa34.84■■■■□ 3.17
HOMER3-206ENST00000594439 MTUS2Q5JR59 1369 aa34.8■■■■□ 3.16
HOMER3-206ENST00000594439 TIAM1Q13009 1591 aa34.78■■■■□ 3.16
HOMER3-206ENST00000594439 CDC42BPBQ9Y5S2 1711 aa34.77■■■■□ 3.16
HOMER3-206ENST00000594439 PREX2Q70Z35 1606 aa34.77■■■■□ 3.16
HOMER3-206ENST00000594439 EHBP1L1Q8N3D4 1523 aa34.76■■■■□ 3.16
HOMER3-206ENST00000594439 FRMPD1Q5SYB0 1578 aa34.75■■■■□ 3.15
HOMER3-206ENST00000594439 EFCAB2Q5VUJ9 269 aa34.75■■■■□ 3.15
HOMER3-206ENST00000594439 CDC42BPAQ5VT25 1732 aa34.75■■■■□ 3.15
HOMER3-206ENST00000594439 ARHGAP5Q13017 1502 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms