RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 ERCC6L2Q5T890 1561 aa29.38■■■□□ 2.29
IRF3-208ENST00000594387 PRG4Q92954 1404 aaPredicted RBP29.37■■■□□ 2.29
IRF3-208ENST00000594387 KIAA0586Q9BVV6 1533 aa29.35■■■□□ 2.29
IRF3-208ENST00000594387 TRHP20396 242 aaPredicted RBP29.32■■■□□ 2.28
IRF3-208ENST00000594387 RAPGEF2Q9Y4G8 1499 aa29.26■■■□□ 2.27
IRF3-208ENST00000594387 IQGAP2Q13576 1575 aa29.18■■■□□ 2.26
IRF3-208ENST00000594387 CARMIL2Q6F5E8 1435 aa29.13■■■□□ 2.25
IRF3-208ENST00000594387 CTTNBP2Q8WZ74 1663 aa29.09■■■□□ 2.25
IRF3-208ENST00000594387 NPM1P06748 294 aaKnown RBP eCLIP29.09■■■□□ 2.25
IRF3-208ENST00000594387 CSRNP3Q8WYN3 585 aa29.02■■■□□ 2.24
IRF3-208ENST00000594387 EEA1Q15075 1411 aa29.02■■■□□ 2.24
IRF3-208ENST00000594387 TTBK1Q5TCY1 1321 aaPredicted RBP29.01■■■□□ 2.23
IRF3-208ENST00000594387 PTPRGP23470 1445 aa29.01■■■□□ 2.23
IRF3-208ENST00000594387 PRXQ9BXM0 1461 aa29■■■□□ 2.23
IRF3-208ENST00000594387 TNIKQ9UKE5 1360 aa28.99■■■□□ 2.23
IRF3-208ENST00000594387 UGGT2Q9NYU1 1516 aa28.95■■■□□ 2.23
IRF3-208ENST00000594387 ADCY10Q96PN6 1610 aa28.93■■■□□ 2.22
IRF3-208ENST00000594387 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
IRF3-208ENST00000594387 DISP1Q96F81 1524 aa28.89■■■□□ 2.22
IRF3-208ENST00000594387 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.22
IRF3-208ENST00000594387 GOLGA3Q08378 1498 aa28.88■■■□□ 2.21
IRF3-208ENST00000594387 KIAA0556O60303 1618 aa28.87■■■□□ 2.21
IRF3-208ENST00000594387 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
IRF3-208ENST00000594387 MAPKBP1O60336 1514 aa28.81■■■□□ 2.2
IRF3-208ENST00000594387 UACAQ9BZF9 1416 aa28.78■■■□□ 2.2
IRF3-208ENST00000594387 ABCC2Q92887 1545 aa28.74■■■□□ 2.19
IRF3-208ENST00000594387 UHRF1BP1LA0JNW5 1464 aa28.74■■■□□ 2.19
IRF3-208ENST00000594387 FAM69CQ0P6D2 419 aa28.73■■■□□ 2.19
IRF3-208ENST00000594387 KIF21BO75037 1637 aa28.71■■■□□ 2.19
IRF3-208ENST00000594387 ABCC10Q5T3U5 1492 aa28.71■■■□□ 2.19
IRF3-208ENST00000594387 DIP2BQ9P265 1576 aa28.66■■■□□ 2.18
IRF3-208ENST00000594387 P3H3Q8IVL6 736 aa28.63■■■□□ 2.17
IRF3-208ENST00000594387 PLB1Q6P1J6 1458 aa28.62■■■□□ 2.17
IRF3-208ENST00000594387 RANGAP1P46060 587 aaPredicted RBP28.61■■■□□ 2.17
IRF3-208ENST00000594387 TSPOAP1O95153 1857 aa28.61■■■□□ 2.17
IRF3-208ENST00000594387 ZCCHC11Q5TAX3 1644 aaKnown RBP28.61■■■□□ 2.17
IRF3-208ENST00000594387 KDM5BQ9UGL1 1544 aa28.6■■■□□ 2.17
IRF3-208ENST00000594387 ASXL2Q76L83 1435 aa28.59■■■□□ 2.17
IRF3-208ENST00000594387 UBTFP17480 764 aaKnown RBP28.58■■■□□ 2.17
IRF3-208ENST00000594387 SAMD9Q5K651 1589 aa28.58■■■□□ 2.17
IRF3-208ENST00000594387 ABCA8O94911 1581 aa28.55■■■□□ 2.16
IRF3-208ENST00000594387 EHMT2Q96KQ7 1210 aa28.55■■■□□ 2.16
IRF3-208ENST00000594387 GLI2P10070 1586 aa28.47■■■□□ 2.15
IRF3-208ENST00000594387 EFCAB5A4FU69 1503 aa28.45■■■□□ 2.15
IRF3-208ENST00000594387 RAPGEF6Q8TEU7 1601 aa28.43■■■□□ 2.14
IRF3-208ENST00000594387 EPRSP07814 1512 aaKnown RBP28.41■■■□□ 2.14
IRF3-208ENST00000594387 WDR7Q9Y4E6 1490 aa28.4■■■□□ 2.14
IRF3-208ENST00000594387 FHOD3Q2V2M9 1422 aa28.38■■■□□ 2.13
IRF3-208ENST00000594387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.37■■■□□ 2.13
IRF3-208ENST00000594387 HNRNPUL2Q1KMD3 747 aaKnown RBP28.37■■■□□ 2.13
IRF3-208ENST00000594387 KDM6BO15054 1643 aa28.36■■■□□ 2.13
IRF3-208ENST00000594387 ARID3CA6NKF2 412 aa28.36■■■□□ 2.13
IRF3-208ENST00000594387 KCNH8Q96L42 1107 aa28.36■■■□□ 2.13
IRF3-208ENST00000594387 MAP3K4Q9Y6R4 1608 aa28.34■■■□□ 2.13
IRF3-208ENST00000594387 ATP10BO94823 1461 aa28.31■■■□□ 2.12
IRF3-208ENST00000594387 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
IRF3-208ENST00000594387 CFAP43Q8NDM7 1665 aa28.29■■■□□ 2.12
IRF3-208ENST00000594387 TEX14Q8IWB6 1497 aa28.29■■■□□ 2.12
IRF3-208ENST00000594387 NUP153P49790 1475 aaKnown RBP28.21■■■□□ 2.11
IRF3-208ENST00000594387 FMN1Q68DA7 1419 aa28.21■■■□□ 2.11
IRF3-208ENST00000594387 CD109Q6YHK3 1445 aa28.21■■■□□ 2.11
IRF3-208ENST00000594387 ATP1B4Q9UN42 357 aaPredicted RBP28.19■■■□□ 2.1
IRF3-208ENST00000594387 ARHGAP35Q9NRY4 1499 aa28.19■■■□□ 2.1
IRF3-208ENST00000594387 PLEKHD1A6NEE1 506 aa28.18■■■□□ 2.1
IRF3-208ENST00000594387 MAGI3Q5TCQ9 1506 aa28.13■■■□□ 2.09
IRF3-208ENST00000594387 HECW1Q76N89 1606 aa28.12■■■□□ 2.09
IRF3-208ENST00000594387 ABCA9Q8IUA7 1624 aa28.11■■■□□ 2.09
IRF3-208ENST00000594387 AEBP2Q6ZN18 517 aaPredicted RBP28.11■■■□□ 2.09
IRF3-208ENST00000594387 CDK11AQ9UQ88 783 aaPredicted RBP28.05■■■□□ 2.08
IRF3-208ENST00000594387 CDK13Q14004 1512 aaKnown RBP28.02■■■□□ 2.08
IRF3-208ENST00000594387 CLIP1P30622 1438 aa28■■■□□ 2.07
IRF3-208ENST00000594387 PHLDB1Q86UU1 1377 aa27.98■■■□□ 2.07
IRF3-208ENST00000594387 COL17A1Q9UMD9 1497 aaPredicted RBP27.97■■■□□ 2.07
IRF3-208ENST00000594387 LRRIQ1Q96JM4 1722 aa27.92■■■□□ 2.06
IRF3-208ENST00000594387 NEO1Q92859 1461 aa27.91■■■□□ 2.06
IRF3-208ENST00000594387 CASKIN1Q8WXD9 1431 aa27.91■■■□□ 2.06
IRF3-208ENST00000594387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.9■■■□□ 2.063e-7■□□□□ 11.1
IRF3-208ENST00000594387 ARAP3Q8WWN8 1544 aa27.9■■■□□ 2.06
IRF3-208ENST00000594387 PCF11O94913 1555 aaKnown RBP27.9■■■□□ 2.06
IRF3-208ENST00000594387 CFAP74Q9C0B2 1584 aa27.9■■■□□ 2.06
IRF3-208ENST00000594387 CCDC18Q5T9S5 1454 aa27.89■■■□□ 2.05
IRF3-208ENST00000594387 TTC37Q6PGP7 1564 aa27.86■■■□□ 2.05
IRF3-208ENST00000594387 MYO5CQ9NQX4 1742 aa27.84■■■□□ 2.05
IRF3-208ENST00000594387 KIF14Q15058 1648 aa27.84■■■□□ 2.05
IRF3-208ENST00000594387 FYCO1Q9BQS8 1478 aa27.83■■■□□ 2.05
IRF3-208ENST00000594387 TROQ12816 1431 aaPredicted RBP27.82■■■□□ 2.04
IRF3-208ENST00000594387 FANCAO15360 1455 aa27.81■■■□□ 2.04
IRF3-208ENST00000594387 CEP162Q5TB80 1403 aa27.77■■■□□ 2.04
IRF3-208ENST00000594387 AKNAQ7Z591 1439 aa27.77■■■□□ 2.04
IRF3-208ENST00000594387 PLCH2O75038 1416 aa27.75■■■□□ 2.03
IRF3-208ENST00000594387 RAPGEF3O95398 923 aa27.75■■■□□ 2.03
IRF3-208ENST00000594387 DENND4BO75064 1496 aaPredicted RBP27.73■■■□□ 2.03
IRF3-208ENST00000594387 LOC105371045A0A1W2PR82 267 aa27.73■■■□□ 2.03
IRF3-208ENST00000594387 EFCAB2Q5VUJ9 269 aa27.73■■■□□ 2.03
IRF3-208ENST00000594387 KDM4FA0A1W2PPD8 638 aa27.71■■■□□ 2.03
IRF3-208ENST00000594387 RICTORQ6R327 1708 aa27.68■■■□□ 2.02
IRF3-208ENST00000594387 ADGRL1O94910 1474 aa27.68■■■□□ 2.02
IRF3-208ENST00000594387 ARHGAP5Q13017 1502 aa27.67■■■□□ 2.02
IRF3-208ENST00000594387 FRMPD1Q5SYB0 1578 aa27.64■■■□□ 2.01
IRF3-208ENST00000594387 CDC42BPBQ9Y5S2 1711 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms