RNA–Protein interactions for RNA: ENST00000593035.5

TPGS2-219, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TPGS2, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-219ENST00000593035 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
TPGS2-219ENST00000593035 CUL7Q14999 1698 aa28.9■■■□□ 2.22
TPGS2-219ENST00000593035 CLIP1P30622 1438 aa28.84■■■□□ 2.21
TPGS2-219ENST00000593035 CEP170Q5SW79 1584 aa28.82■■■□□ 2.2
TPGS2-219ENST00000593035 NUP160Q12769 1436 aa28.79■■■□□ 2.2
TPGS2-219ENST00000593035 CLASP1Q7Z460 1538 aa28.78■■■□□ 2.2
TPGS2-219ENST00000593035 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
TPGS2-219ENST00000593035 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
TPGS2-219ENST00000593035 ARHGEF11O15085 1522 aa28.6■■■□□ 2.17
TPGS2-219ENST00000593035 ARAP1Q96P48 1450 aa28.59■■■□□ 2.17
TPGS2-219ENST00000593035 PCGF6Q9BYE7 350 aa28.59■■■□□ 2.17
TPGS2-219ENST00000593035 KIAA0586Q9BVV6 1533 aa28.58■■■□□ 2.17
TPGS2-219ENST00000593035 RIMBP3CA6NJZ7 1639 aa28.58■■■□□ 2.17
TPGS2-219ENST00000593035 RIMBP3BA6NNM3 1639 aa28.58■■■□□ 2.17
TPGS2-219ENST00000593035 RIMBP3Q9UFD9 1639 aa28.58■■■□□ 2.17
TPGS2-219ENST00000593035 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
TPGS2-219ENST00000593035 ARHGAP35Q9NRY4 1499 aa28.56■■■□□ 2.16
TPGS2-219ENST00000593035 JPH4Q96JJ6 628 aa28.55■■■□□ 2.16
TPGS2-219ENST00000593035 CTTNBP2Q8WZ74 1663 aa28.52■■■□□ 2.16
TPGS2-219ENST00000593035 SHROOM2Q13796 1616 aa28.52■■■□□ 2.16
TPGS2-219ENST00000593035 ERCC6L2Q5T890 1561 aa28.51■■■□□ 2.15
TPGS2-219ENST00000593035 PPARGC1BQ86YN6 1023 aaKnown RBP28.49■■■□□ 2.15
TPGS2-219ENST00000593035 IQGAP2Q13576 1575 aa28.47■■■□□ 2.15
TPGS2-219ENST00000593035 PRG4Q92954 1404 aaPredicted RBP28.46■■■□□ 2.15
TPGS2-219ENST00000593035 CYB5RLQ6IPT4 315 aa28.39■■■□□ 2.14
TPGS2-219ENST00000593035 EFCAB5A4FU69 1503 aa28.35■■■□□ 2.13
TPGS2-219ENST00000593035 UGGT2Q9NYU1 1516 aa28.32■■■□□ 2.12
TPGS2-219ENST00000593035 DISP1Q96F81 1524 aa28.29■■■□□ 2.12
TPGS2-219ENST00000593035 SAMD9Q5K651 1589 aa28.27■■■□□ 2.12
TPGS2-219ENST00000593035 TTBK1Q5TCY1 1321 aaPredicted RBP28.26■■■□□ 2.11
TPGS2-219ENST00000593035 CARMIL2Q6F5E8 1435 aa28.25■■■□□ 2.11
TPGS2-219ENST00000593035 FHOD3Q2V2M9 1422 aa28.23■■■□□ 2.11
TPGS2-219ENST00000593035 KIAA0556O60303 1618 aa28.21■■■□□ 2.11
TPGS2-219ENST00000593035 APLP2Q06481 763 aa28.21■■■□□ 2.11
TPGS2-219ENST00000593035 P3H3Q8IVL6 736 aa28.21■■■□□ 2.11
TPGS2-219ENST00000593035 PCF11O94913 1555 aaKnown RBP28.14■■■□□ 2.1
TPGS2-219ENST00000593035 PTPRGP23470 1445 aa28.14■■■□□ 2.1
TPGS2-219ENST00000593035 MAP3K1Q13233 1512 aa28.09■■■□□ 2.09
TPGS2-219ENST00000593035 FMN1Q68DA7 1419 aa28.08■■■□□ 2.09
TPGS2-219ENST00000593035 FYCO1Q9BQS8 1478 aa28.07■■■□□ 2.08
TPGS2-219ENST00000593035 CASKIN1Q8WXD9 1431 aa28.07■■■□□ 2.08
TPGS2-219ENST00000593035 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
TPGS2-219ENST00000593035 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
TPGS2-219ENST00000593035 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
TPGS2-219ENST00000593035 ADCY10Q96PN6 1610 aa27.99■■■□□ 2.07
TPGS2-219ENST00000593035 UACAQ9BZF9 1416 aa27.96■■■□□ 2.07
TPGS2-219ENST00000593035 PLB1Q6P1J6 1458 aa27.96■■■□□ 2.07
TPGS2-219ENST00000593035 LRRC9Q6ZRR7 1453 aa27.92■■■□□ 2.06
TPGS2-219ENST00000593035 ABCC2Q92887 1545 aa27.89■■■□□ 2.06
TPGS2-219ENST00000593035 ABCA8O94911 1581 aa27.88■■■□□ 2.05
TPGS2-219ENST00000593035 LRRIQ1Q96JM4 1722 aa27.88■■■□□ 2.05
TPGS2-219ENST00000593035 ATP1B4Q9UN42 357 aaPredicted RBP27.87■■■□□ 2.05
TPGS2-219ENST00000593035 UHRF1BP1LA0JNW5 1464 aa27.87■■■□□ 2.05
TPGS2-219ENST00000593035 HRCP23327 699 aa27.87■■■□□ 2.05
TPGS2-219ENST00000593035 NPM1P06748 294 aaKnown RBP eCLIP27.83■■■□□ 2.05
TPGS2-219ENST00000593035 ARID3CA6NKF2 412 aa27.82■■■□□ 2.04
TPGS2-219ENST00000593035 HECW1Q76N89 1606 aa27.78■■■□□ 2.04
TPGS2-219ENST00000593035 RAPGEF6Q8TEU7 1601 aa27.78■■■□□ 2.04
TPGS2-219ENST00000593035 RRBP1Q9P2E9 1410 aaKnown RBP27.78■■■□□ 2.04
TPGS2-219ENST00000593035 KDM5BQ9UGL1 1544 aa27.77■■■□□ 2.04
TPGS2-219ENST00000593035 CCDC18Q5T9S5 1454 aa27.74■■■□□ 2.03
TPGS2-219ENST00000593035 ZCCHC11Q5TAX3 1644 aaKnown RBP27.73■■■□□ 2.03
TPGS2-219ENST00000593035 NUP153P49790 1475 aaKnown RBP27.72■■■□□ 2.03
TPGS2-219ENST00000593035 EPRSP07814 1512 aaKnown RBP27.7■■■□□ 2.03
TPGS2-219ENST00000593035 TRHP20396 242 aaPredicted RBP27.7■■■□□ 2.03
TPGS2-219ENST00000593035 MAPKBP1O60336 1514 aa27.69■■■□□ 2.02
TPGS2-219ENST00000593035 PHLDB1Q86UU1 1377 aa27.69■■■□□ 2.02
TPGS2-219ENST00000593035 ATP10BO94823 1461 aa27.68■■■□□ 2.02
TPGS2-219ENST00000593035 ASXL2Q76L83 1435 aa27.66■■■□□ 2.02
TPGS2-219ENST00000593035 CCNB3Q8WWL7 1395 aa27.65■■■□□ 2.02
TPGS2-219ENST00000593035 MAGI3Q5TCQ9 1506 aa27.65■■■□□ 2.02
TPGS2-219ENST00000593035 MTUS2Q5JR59 1369 aa27.65■■■□□ 2.02
TPGS2-219ENST00000593035 CDK13Q14004 1512 aaKnown RBP27.64■■■□□ 2.02
TPGS2-219ENST00000593035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.64■■■□□ 2.01
TPGS2-219ENST00000593035 HNRNPUL2Q1KMD3 747 aaKnown RBP27.64■■■□□ 2.01
TPGS2-219ENST00000593035 EHBP1L1Q8N3D4 1523 aa27.64■■■□□ 2.01
TPGS2-219ENST00000593035 ABCC10Q5T3U5 1492 aa27.57■■■□□ 2
TPGS2-219ENST00000593035 SUPT6HQ7KZ85 1726 aaKnown RBP27.56■■■□□ 2
TPGS2-219ENST00000593035 FAM69CQ0P6D2 419 aa27.55■■■□□ 2
TPGS2-219ENST00000593035 NCOA2Q15596 1464 aa27.55■■■□□ 2
TPGS2-219ENST00000593035 WDR7Q9Y4E6 1490 aa27.54■■■□□ 2
TPGS2-219ENST00000593035 DIP2BQ9P265 1576 aa27.54■■■□□ 2
TPGS2-219ENST00000593035 KIF13AQ9H1H9 1805 aa27.52■■■□□ 2
TPGS2-219ENST00000593035 KCNH8Q96L42 1107 aa27.52■■■□□ 2
TPGS2-219ENST00000593035 FGD6Q6ZV73 1430 aa27.47■■□□□ 1.99
TPGS2-219ENST00000593035 PLEKHD1A6NEE1 506 aa27.45■■□□□ 1.99
TPGS2-219ENST00000593035 MYOM3Q5VTT5 1437 aa27.45■■□□□ 1.98
TPGS2-219ENST00000593035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.44■■□□□ 1.98
TPGS2-219ENST00000593035 ZEB1P37275 1124 aaPredicted RBP27.41■■□□□ 1.98
TPGS2-219ENST00000593035 CCER1Q8TC90 406 aaPredicted RBP27.4■■□□□ 1.98
TPGS2-219ENST00000593035 GLI2P10070 1586 aa27.39■■□□□ 1.98
TPGS2-219ENST00000593035 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
TPGS2-219ENST00000593035 CDK11AQ9UQ88 783 aaPredicted RBP27.36■■□□□ 1.97
TPGS2-219ENST00000593035 TROQ12816 1431 aaPredicted RBP27.36■■□□□ 1.97
TPGS2-219ENST00000593035 TSPOAP1O95153 1857 aa27.34■■□□□ 1.97
TPGS2-219ENST00000593035 ITGAEP38570 1179 aa27.33■■□□□ 1.97
TPGS2-219ENST00000593035 MAP3K4Q9Y6R4 1608 aa27.31■■□□□ 1.96
TPGS2-219ENST00000593035 PTPN23Q9H3S7 1636 aa27.3■■□□□ 1.96
TPGS2-219ENST00000593035 TCOF1Q13428 1488 aaKnown RBP27.28■■□□□ 1.96
TPGS2-219ENST00000593035 CD109Q6YHK3 1445 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms