RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.57	■■■□□ 2.8
CIRBP-238	ENST00000592412	IGF1R	P08069	1367 aa		32.44	■■■□□ 2.78
CIRBP-238	ENST00000592412	ADCY10	Q96PN6	1610 aa		32.4	■■■□□ 2.78
CIRBP-238	ENST00000592412	KIAA0586	Q9BVV6	1533 aa		32.4	■■■□□ 2.78
CIRBP-238	ENST00000592412	ABCC10	Q5T3U5	1492 aa		32.39	■■■□□ 2.78
CIRBP-238	ENST00000592412	MAPKBP1	O60336	1514 aa		32.38	■■■□□ 2.77
CIRBP-238	ENST00000592412	KIF27	Q86VH2	1401 aa		32.35	■■■□□ 2.77
CIRBP-238	ENST00000592412	CUL7	Q14999	1698 aa		32.35	■■■□□ 2.77
CIRBP-238	ENST00000592412	DIP2B	Q9P265	1576 aa		32.32	■■■□□ 2.77
CIRBP-238	ENST00000592412	FAM69C	Q0P6D2	419 aa		32.32	■■■□□ 2.76
CIRBP-238	ENST00000592412	NPM1	P06748	294 aa	Known RBP eCLIP	32.26	■■■□□ 2.75
CIRBP-238	ENST00000592412	CARMIL1	Q5VZK9	1371 aa		32.18	■■■□□ 2.74
CIRBP-238	ENST00000592412	PTPRG	P23470	1445 aa		32.11	■■■□□ 2.73
CIRBP-238	ENST00000592412	KDM6B	O15054	1643 aa		32.06	■■■□□ 2.72
CIRBP-238	ENST00000592412	IQGAP2	Q13576	1575 aa		32.05	■■■□□ 2.72
CIRBP-238	ENST00000592412	TSPOAP1	O95153	1857 aa		32.05	■■■□□ 2.72
CIRBP-238	ENST00000592412	TNIK	Q9UKE5	1360 aa		32.04	■■■□□ 2.72
CIRBP-238	ENST00000592412	ABCC2	Q92887	1545 aa		32.02	■■■□□ 2.72
CIRBP-238	ENST00000592412	CARMIL2	Q6F5E8	1435 aa		32.01	■■■□□ 2.72
CIRBP-238	ENST00000592412	TTBK1	Q5TCY1	1321 aa	Predicted RBP	32	■■■□□ 2.71
CIRBP-238	ENST00000592412	DISP1	Q96F81	1524 aa		31.97	■■■□□ 2.71
CIRBP-238	ENST00000592412	UHRF1BP1L	A0JNW5	1464 aa		31.94	■■■□□ 2.7
CIRBP-238	ENST00000592412	ASXL2	Q76L83	1435 aa		31.93	■■■□□ 2.7
CIRBP-238	ENST00000592412	KDM4F	A0A1W2PPD8	638 aa		31.91	■■■□□ 2.7
CIRBP-238	ENST00000592412	PPRC1	Q5VV67	1664 aa	Known RBP	31.9	■■■□□ 2.7
CIRBP-238	ENST00000592412	PLB1	Q6P1J6	1458 aa		31.89	■■■□□ 2.7
CIRBP-238	ENST00000592412	GLI2	P10070	1586 aa		31.89	■■■□□ 2.7
CIRBP-238	ENST00000592412	UACA	Q9BZF9	1416 aa		31.88	■■■□□ 2.69
CIRBP-238	ENST00000592412	UGGT2	Q9NYU1	1516 aa		31.85	■■■□□ 2.69
CIRBP-238	ENST00000592412	RAPGEF2	Q9Y4G8	1499 aa		31.85	■■■□□ 2.69
CIRBP-238	ENST00000592412	KDM5B	Q9UGL1	1544 aa		31.81	■■■□□ 2.68
CIRBP-238	ENST00000592412	KIAA0556	O60303	1618 aa		31.78	■■■□□ 2.68
CIRBP-238	ENST00000592412	EPRS	P07814	1512 aa	Known RBP	31.76	■■■□□ 2.68
CIRBP-238	ENST00000592412	ZCCHC11	Q5TAX3	1644 aa	Known RBP	31.74	■■■□□ 2.67
CIRBP-238	ENST00000592412	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.72	■■■□□ 2.67
CIRBP-238	ENST00000592412	MAP3K4	Q9Y6R4	1608 aa		31.72	■■■□□ 2.67
CIRBP-238	ENST00000592412	CTTNBP2	Q8WZ74	1663 aa		31.62	■■■□□ 2.65
CIRBP-238	ENST00000592412	ADGRL1	O94910	1474 aa		31.58	■■■□□ 2.65
CIRBP-238	ENST00000592412	WDR7	Q9Y4E6	1490 aa		31.58	■■■□□ 2.65
CIRBP-238	ENST00000592412	TEX14	Q8IWB6	1497 aa		31.57	■■■□□ 2.64
CIRBP-238	ENST00000592412	ABCA8	O94911	1581 aa		31.52	■■■□□ 2.64
CIRBP-238	ENST00000592412	PRX	Q9BXM0	1461 aa		31.51	■■■□□ 2.63
CIRBP-238	ENST00000592412	GOLGA3	Q08378	1498 aa		31.49	■■■□□ 2.63
CIRBP-238	ENST00000592412	MAGI3	Q5TCQ9	1506 aa		31.41	■■■□□ 2.62
CIRBP-238	ENST00000592412	CFAP43	Q8NDM7	1665 aa		31.41	■■■□□ 2.62
CIRBP-238	ENST00000592412	CD109	Q6YHK3	1445 aa		31.39	■■■□□ 2.62
CIRBP-238	ENST00000592412	KCNH8	Q96L42	1107 aa		31.35	■■■□□ 2.61
CIRBP-238	ENST00000592412	ATP10B	O94823	1461 aa		31.25	■■■□□ 2.59
CIRBP-238	ENST00000592412	HECW2	Q9P2P5	1572 aa		31.24	■■■□□ 2.59
CIRBP-238	ENST00000592412	P3H3	Q8IVL6	736 aa		31.22	■■■□□ 2.59
CIRBP-238	ENST00000592412	ARID3C	A6NKF2	412 aa		31.21	■■■□□ 2.59
CIRBP-238	ENST00000592412	SAMD9	Q5K651	1589 aa		31.21	■■■□□ 2.59
CIRBP-238	ENST00000592412	ARAP3	Q8WWN8	1544 aa		31.18	■■■□□ 2.58
CIRBP-238	ENST00000592412	ILDR1	Q86SU0	546 aa	Predicted RBP	31.17	■■■□□ 2.58
CIRBP-238	ENST00000592412	KIF21B	O75037	1637 aa		31.16	■■■□□ 2.58
CIRBP-238	ENST00000592412	ABCA9	Q8IUA7	1624 aa		31.14	■■■□□ 2.58
CIRBP-238	ENST00000592412	CSRNP3	Q8WYN3	585 aa		31.11	■■■□□ 2.57
CIRBP-238	ENST00000592412	RAPGEF6	Q8TEU7	1601 aa		31.09	■■■□□ 2.57
CIRBP-238	ENST00000592412	NUP153	P49790	1475 aa	Known RBP	31.03	■■■□□ 2.56
CIRBP-238	ENST00000592412	FAM9A	Q8IZU1	332 aa	Predicted RBP	31.01	■■■□□ 2.55
CIRBP-238	ENST00000592412	PHLDB1	Q86UU1	1377 aa		31.01	■■■□□ 2.55
CIRBP-238	ENST00000592412	NEO1	Q92859	1461 aa		30.98	■■■□□ 2.55
CIRBP-238	ENST00000592412	FRMPD1	Q5SYB0	1578 aa		30.97	■■■□□ 2.55
CIRBP-238	ENST00000592412	RAPGEF3	O95398	923 aa		30.97	■■■□□ 2.55
CIRBP-238	ENST00000592412	FHOD3	Q2V2M9	1422 aa		30.96	■■■□□ 2.55
CIRBP-238	ENST00000592412	ADAMTSL3	P82987	1691 aa		30.93	■■■□□ 2.54
CIRBP-238	ENST00000592412	EEA1	Q15075	1411 aa		30.92	■■■□□ 2.54
CIRBP-238	ENST00000592412	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	30.9	■■■□□ 2.54
CIRBP-238	ENST00000592412	HNRNPUL2	Q1KMD3	747 aa	Known RBP	30.9	■■■□□ 2.54
CIRBP-238	ENST00000592412	RANGAP1	P46060	587 aa	Predicted RBP	30.89	■■■□□ 2.54
CIRBP-238	ENST00000592412	PTPRM	P28827	1452 aa		30.88	■■■□□ 2.53
CIRBP-238	ENST00000592412	BCORL1	Q5H9F3	1711 aa		30.82	■■■□□ 2.52
CIRBP-238	ENST00000592412	RICTOR	Q6R327	1708 aa		30.78	■■■□□ 2.52
CIRBP-238	ENST00000592412	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	30.78	■■■□□ 2.52
CIRBP-238	ENST00000592412	MADD	Q8WXG6	1647 aa		30.78	■■■□□ 2.52
CIRBP-238	ENST00000592412	EFCAB5	A4FU69	1503 aa		30.78	■■■□□ 2.52
CIRBP-238	ENST00000592412	ARHGEF40	Q8TER5	1519 aa		30.78	■■■□□ 2.52
CIRBP-238	ENST00000592412	PLEKHD1	A6NEE1	506 aa		30.76	■■■□□ 2.51
CIRBP-238	ENST00000592412	TTC37	Q6PGP7	1564 aa		30.75	■■■□□ 2.51
CIRBP-238	ENST00000592412	DENND4B	O75064	1496 aa	Predicted RBP	30.75	■■■□□ 2.51
CIRBP-238	ENST00000592412	AKNA	Q7Z591	1439 aa		30.74	■■■□□ 2.51
CIRBP-238	ENST00000592412	FANCA	O15360	1455 aa		30.73	■■■□□ 2.51
CIRBP-238	ENST00000592412	CDK13	Q14004	1512 aa	Known RBP	30.69	■■■□□ 2.5
CIRBP-238	ENST00000592412	CFAP74	Q9C0B2	1584 aa		30.69	■■■□□ 2.5
CIRBP-238	ENST00000592412	ARID4B	Q4LE39	1312 aa	Predicted RBP	30.69	■■■□□ 2.5
CIRBP-238	ENST00000592412	ZMYM4	Q5VZL5	1548 aa		30.67	■■■□□ 2.5
CIRBP-238	ENST00000592412	SIGLEC1	Q9BZZ2	1709 aa		30.66	■■■□□ 2.5
CIRBP-238	ENST00000592412	PCF11	O94913	1555 aa	Known RBP	30.65	■■■□□ 2.5
CIRBP-238	ENST00000592412	LMTK3	Q96Q04	1460 aa		30.64	■■■□□ 2.5
CIRBP-238	ENST00000592412	RIMS1	Q86UR5	1692 aa	Known RBP	30.63	■■■□□ 2.49
CIRBP-238	ENST00000592412	YEATS2	Q9ULM3	1422 aa		30.62	■■■□□ 2.49
CIRBP-238	ENST00000592412	ZFYVE16	Q7Z3T8	1539 aa		30.58	■■■□□ 2.49
CIRBP-238	ENST00000592412	HECW1	Q76N89	1606 aa		30.56	■■■□□ 2.48
CIRBP-238	ENST00000592412	PLCH2	O75038	1416 aa		30.56	■■■□□ 2.48
CIRBP-238	ENST00000592412	MAGI2	Q86UL8	1455 aa		30.53	■■■□□ 2.48
CIRBP-238	ENST00000592412	POGZ	Q7Z3K3	1410 aa		30.53	■■■□□ 2.48
CIRBP-238	ENST00000592412	ARHGAP35	Q9NRY4	1499 aa		30.52	■■■□□ 2.48
CIRBP-238	ENST00000592412	FBXO41	Q8TF61	875 aa		30.52	■■■□□ 2.48
CIRBP-238	ENST00000592412	SCAPER	Q9BY12	1400 aa		30.51	■■■□□ 2.47
CIRBP-238	ENST00000592412	EHMT2	Q96KQ7	1210 aa		30.49	■■■□□ 2.47

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