RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
TPM4-215ENST00000592138 CEP170Q5SW79 1584 aa16.27■□□□□ 0.2
TPM4-215ENST00000592138 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
TPM4-215ENST00000592138 PRXQ9BXM0 1461 aa16.26■□□□□ 0.19
TPM4-215ENST00000592138 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
TPM4-215ENST00000592138 CSRNP3Q8WYN3 585 aa16.23■□□□□ 0.19
TPM4-215ENST00000592138 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
TPM4-215ENST00000592138 SHROOM2Q13796 1616 aa16.17■□□□□ 0.18
TPM4-215ENST00000592138 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
TPM4-215ENST00000592138 KIF21BO75037 1637 aa16.12■□□□□ 0.17
TPM4-215ENST00000592138 JPH4Q96JJ6 628 aa16.11■□□□□ 0.17
TPM4-215ENST00000592138 IQGAP2Q13576 1575 aa16.1■□□□□ 0.17
TPM4-215ENST00000592138 FAM9AQ8IZU1 332 aaPredicted RBP16.09■□□□□ 0.17
TPM4-215ENST00000592138 PRG4Q92954 1404 aaPredicted RBP16.07■□□□□ 0.16
TPM4-215ENST00000592138 UGGT2Q9NYU1 1516 aa16.05■□□□□ 0.16
TPM4-215ENST00000592138 CTTNBP2Q8WZ74 1663 aa16.05■□□□□ 0.16
TPM4-215ENST00000592138 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
TPM4-215ENST00000592138 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
TPM4-215ENST00000592138 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
TPM4-215ENST00000592138 DISP1Q96F81 1524 aa15.99■□□□□ 0.15
TPM4-215ENST00000592138 KIAA0556O60303 1618 aa15.95■□□□□ 0.14
TPM4-215ENST00000592138 TNIKQ9UKE5 1360 aa15.95■□□□□ 0.14
TPM4-215ENST00000592138 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
TPM4-215ENST00000592138 PTPRGP23470 1445 aa15.91■□□□□ 0.14
TPM4-215ENST00000592138 SAMD9Q5K651 1589 aa15.9■□□□□ 0.14
TPM4-215ENST00000592138 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.13
TPM4-215ENST00000592138 UHRF1BP1LA0JNW5 1464 aa15.84■□□□□ 0.13
TPM4-215ENST00000592138 KIF13AQ9H1H9 1805 aa15.82■□□□□ 0.12
TPM4-215ENST00000592138 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
TPM4-215ENST00000592138 EHMT2Q96KQ7 1210 aa15.81■□□□□ 0.12
TPM4-215ENST00000592138 ADCY10Q96PN6 1610 aa15.8■□□□□ 0.12
TPM4-215ENST00000592138 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
TPM4-215ENST00000592138 ARHGAP35Q9NRY4 1499 aa15.78■□□□□ 0.12
TPM4-215ENST00000592138 ABCA8O94911 1581 aa15.77■□□□□ 0.11
TPM4-215ENST00000592138 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.11
TPM4-215ENST00000592138 PLB1Q6P1J6 1458 aa15.76■□□□□ 0.11
TPM4-215ENST00000592138 P3H3Q8IVL6 736 aa15.75■□□□□ 0.11
TPM4-215ENST00000592138 MAPKBP1O60336 1514 aa15.74■□□□□ 0.11
TPM4-215ENST00000592138 KDM5BQ9UGL1 1544 aa15.74■□□□□ 0.11
TPM4-215ENST00000592138 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
TPM4-215ENST00000592138 RANGAP1P46060 587 aaPredicted RBP15.74■□□□□ 0.11
TPM4-215ENST00000592138 TTBK1Q5TCY1 1321 aaPredicted RBP15.73■□□□□ 0.11
TPM4-215ENST00000592138 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
TPM4-215ENST00000592138 CLIP1P30622 1438 aa15.72■□□□□ 0.11
TPM4-215ENST00000592138 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
TPM4-215ENST00000592138 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
TPM4-215ENST00000592138 LOC105371045A0A1W2PR82 267 aa15.68■□□□□ 0.1
TPM4-215ENST00000592138 NUP153P49790 1475 aaKnown RBP15.65■□□□□ 0.1
TPM4-215ENST00000592138 ZCCHC11Q5TAX3 1644 aaKnown RBP15.65■□□□□ 0.1
TPM4-215ENST00000592138 ASXL2Q76L83 1435 aa15.63■□□□□ 0.09
TPM4-215ENST00000592138 ATP10BO94823 1461 aa15.63■□□□□ 0.09
TPM4-215ENST00000592138 ABCC10Q5T3U5 1492 aa15.63■□□□□ 0.09
TPM4-215ENST00000592138 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
TPM4-215ENST00000592138 CASKIN1Q8WXD9 1431 aa15.61■□□□□ 0.09
TPM4-215ENST00000592138 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
TPM4-215ENST00000592138 WDR7Q9Y4E6 1490 aa15.59■□□□□ 0.09
TPM4-215ENST00000592138 FOXD1Q16676 465 aa15.59■□□□□ 0.09
TPM4-215ENST00000592138 DIP2BQ9P265 1576 aa15.58■□□□□ 0.09
TPM4-215ENST00000592138 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
TPM4-215ENST00000592138 PCF11O94913 1555 aaKnown RBP15.56■□□□□ 0.08
TPM4-215ENST00000592138 GLI2P10070 1586 aa15.56■□□□□ 0.08
TPM4-215ENST00000592138 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
TPM4-215ENST00000592138 FAM69CQ0P6D2 419 aa15.53■□□□□ 0.08
TPM4-215ENST00000592138 KDM4FA0A1W2PPD8 638 aa15.52■□□□□ 0.08
TPM4-215ENST00000592138 ILDR1Q86SU0 546 aaPredicted RBP15.52■□□□□ 0.08
TPM4-215ENST00000592138 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.07
TPM4-215ENST00000592138 VPS8Q8N3P4 1428 aa15.51■□□□□ 0.07
TPM4-215ENST00000592138 ARID3CA6NKF2 412 aa15.51■□□□□ 0.07
TPM4-215ENST00000592138 KDM6BO15054 1643 aa15.5■□□□□ 0.07
TPM4-215ENST00000592138 PLEKHD1A6NEE1 506 aa15.5■□□□□ 0.07
TPM4-215ENST00000592138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
TPM4-215ENST00000592138 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
TPM4-215ENST00000592138 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
TPM4-215ENST00000592138 ATP1B4Q9UN42 357 aaPredicted RBP15.48■□□□□ 0.07
TPM4-215ENST00000592138 MAP3K4Q9Y6R4 1608 aa15.46■□□□□ 0.07
TPM4-215ENST00000592138 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.06
TPM4-215ENST00000592138 TROQ12816 1431 aaPredicted RBP15.45■□□□□ 0.06
TPM4-215ENST00000592138 TSPOAP1O95153 1857 aa15.45■□□□□ 0.06
TPM4-215ENST00000592138 ABCA9Q8IUA7 1624 aa15.45■□□□□ 0.06
TPM4-215ENST00000592138 CFAP43Q8NDM7 1665 aa15.44■□□□□ 0.06
TPM4-215ENST00000592138 KCNH8Q96L42 1107 aa15.43■□□□□ 0.06
TPM4-215ENST00000592138 MAGI3Q5TCQ9 1506 aa15.43■□□□□ 0.06
TPM4-215ENST00000592138 MAP3K1Q13233 1512 aa15.42■□□□□ 0.06
TPM4-215ENST00000592138 CD109Q6YHK3 1445 aa15.42■□□□□ 0.06
TPM4-215ENST00000592138 TEX14Q8IWB6 1497 aa15.41■□□□□ 0.06
TPM4-215ENST00000592138 KIF14Q15058 1648 aa15.39■□□□□ 0.05
TPM4-215ENST00000592138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.39■□□□□ 0.05
TPM4-215ENST00000592138 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
TPM4-215ENST00000592138 TIAM1Q13009 1591 aa15.37■□□□□ 0.05
TPM4-215ENST00000592138 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
TPM4-215ENST00000592138 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
TPM4-215ENST00000592138 ARAP3Q8WWN8 1544 aa15.35■□□□□ 0.05
TPM4-215ENST00000592138 TTC37Q6PGP7 1564 aa15.35■□□□□ 0.05
TPM4-215ENST00000592138 MTUS2Q5JR59 1369 aa15.35■□□□□ 0.05
TPM4-215ENST00000592138 PLCH2O75038 1416 aa15.34■□□□□ 0.05
TPM4-215ENST00000592138 NEO1Q92859 1461 aa15.33■□□□□ 0.05
TPM4-215ENST00000592138 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
TPM4-215ENST00000592138 LRRC9Q6ZRR7 1453 aa15.32■□□□□ 0.04
TPM4-215ENST00000592138 HECW2Q9P2P5 1572 aa15.32■□□□□ 0.04
TPM4-215ENST00000592138 CFAP74Q9C0B2 1584 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms