RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 EIF4G2P78344 907 aaKnown RBP eCLIP14.75□□□□□ -0.05
CNTNAP1-204ENST00000591662 SOGA1O94964 1423 aa14.74□□□□□ -0.05
CNTNAP1-204ENST00000591662 HIRIP3Q9BW71 556 aaPredicted RBP14.74□□□□□ -0.05
CNTNAP1-204ENST00000591662 FANCIQ9NVI1 1328 aa14.73□□□□□ -0.05
CNTNAP1-204ENST00000591662 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
CNTNAP1-204ENST00000591662 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
CNTNAP1-204ENST00000591662 BAZ1AQ9NRL2 1556 aaPredicted RBP14.71□□□□□ -0.05
CNTNAP1-204ENST00000591662 TMC1Q8TDI8 760 aa14.69□□□□□ -0.06
CNTNAP1-204ENST00000591662 NEFMP07197 916 aa14.68□□□□□ -0.06
CNTNAP1-204ENST00000591662 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
CNTNAP1-204ENST00000591662 DHX57Q6P158 1386 aaKnown RBP14.64□□□□□ -0.07
CNTNAP1-204ENST00000591662 B4GALNT3Q6L9W6 998 aa14.64□□□□□ -0.07
CNTNAP1-204ENST00000591662 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
CNTNAP1-204ENST00000591662 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
CNTNAP1-204ENST00000591662 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.61□□□□□ -0.07
CNTNAP1-204ENST00000591662 SETD5Q9C0A6 1442 aa14.61□□□□□ -0.07
CNTNAP1-204ENST00000591662 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
CNTNAP1-204ENST00000591662 BAZ1BQ9UIG0 1483 aaKnown RBP14.6□□□□□ -0.07
CNTNAP1-204ENST00000591662 ANP32BQ92688 251 aaKnown RBP14.59□□□□□ -0.07
CNTNAP1-204ENST00000591662 CANXP27824 592 aaKnown RBP14.59□□□□□ -0.07
CNTNAP1-204ENST00000591662 ABCC8Q09428 1581 aa14.58□□□□□ -0.07
CNTNAP1-204ENST00000591662 RTN4Q9NQC3 1192 aaKnown RBP14.57□□□□□ -0.08
CNTNAP1-204ENST00000591662 IPO9Q96P70 1041 aaKnown RBP14.56□□□□□ -0.08
CNTNAP1-204ENST00000591662 MTUS2Q5JR59 1369 aa14.56□□□□□ -0.08
CNTNAP1-204ENST00000591662 ESF1Q9H501 851 aaKnown RBP14.55□□□□□ -0.08
CNTNAP1-204ENST00000591662 RAB3GAP2Q9H2M9 1393 aa14.54□□□□□ -0.08
CNTNAP1-204ENST00000591662 KIF27Q86VH2 1401 aa14.54□□□□□ -0.08
CNTNAP1-204ENST00000591662 LAS1LQ9Y4W2 734 aaKnown RBP14.54□□□□□ -0.08
CNTNAP1-204ENST00000591662 USP35Q9P2H5 1018 aa14.54□□□□□ -0.08
CNTNAP1-204ENST00000591662 BECN1Q14457 450 aa14.53□□□□□ -0.08
CNTNAP1-204ENST00000591662 PPP1R15AO75807 674 aaPredicted RBP14.52□□□□□ -0.08
CNTNAP1-204ENST00000591662 WIZO95785 1651 aa14.51□□□□□ -0.09
CNTNAP1-204ENST00000591662 CHGAP10645 457 aaKnown RBP14.51□□□□□ -0.09
CNTNAP1-204ENST00000591662 CHMP7Q8WUX9 453 aaPredicted RBP14.51□□□□□ -0.09
CNTNAP1-204ENST00000591662 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
CNTNAP1-204ENST00000591662 CHIC2Q9UKJ5 165 aa14.5□□□□□ -0.09
CNTNAP1-204ENST00000591662 KANK4Q5T7N3 995 aaPredicted RBP14.49□□□□□ -0.09
CNTNAP1-204ENST00000591662 FHAD1B1AJZ9 1412 aa14.48□□□□□ -0.09
CNTNAP1-204ENST00000591662 TCERG1O14776 1098 aaKnown RBP14.48□□□□□ -0.09
CNTNAP1-204ENST00000591662 TSPY4P0CV99 314 aa14.48□□□□□ -0.09
CNTNAP1-204ENST00000591662 TSPY10P0CW01 314 aa14.48□□□□□ -0.09
CNTNAP1-204ENST00000591662 SALL2Q9Y467 1007 aaPredicted RBP14.47□□□□□ -0.09
CNTNAP1-204ENST00000591662 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
CNTNAP1-204ENST00000591662 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
CNTNAP1-204ENST00000591662 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
CNTNAP1-204ENST00000591662 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.1
CNTNAP1-204ENST00000591662 L1TD1Q5T7N2 865 aaKnown RBP14.41□□□□□ -0.1
CNTNAP1-204ENST00000591662 TRIM44Q96DX7 344 aaPredicted RBP14.41□□□□□ -0.1
CNTNAP1-204ENST00000591662 HSP90AA1P07900 732 aaKnown RBP14.4□□□□□ -0.1
CNTNAP1-204ENST00000591662 HSPA5P11021 654 aaKnown RBP14.4□□□□□ -0.1
CNTNAP1-204ENST00000591662 WDR43Q15061 677 aaKnown RBP eCLIP14.39□□□□□ -0.11
CNTNAP1-204ENST00000591662 RRP7BPQ9NSQ0 103 aa14.39□□□□□ -0.11
CNTNAP1-204ENST00000591662 NUDCQ9Y266 331 aa14.39□□□□□ -0.11
CNTNAP1-204ENST00000591662 NAP1L5Q96NT1 182 aaPredicted RBP14.37□□□□□ -0.11
CNTNAP1-204ENST00000591662 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
CNTNAP1-204ENST00000591662 ARHGAP35Q9NRY4 1499 aa14.36□□□□□ -0.11
CNTNAP1-204ENST00000591662 PLPPR3Q6T4P5 718 aa14.36□□□□□ -0.11
CNTNAP1-204ENST00000591662 ARXQ96QS3 562 aa14.35□□□□□ -0.11
CNTNAP1-204ENST00000591662 RSPH6AQ9H0K4 717 aa14.35□□□□□ -0.11
CNTNAP1-204ENST00000591662 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
CNTNAP1-204ENST00000591662 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
CNTNAP1-204ENST00000591662 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.33□□□□□ -0.11
CNTNAP1-204ENST00000591662 PLEKHD1A6NEE1 506 aa14.32□□□□□ -0.12
CNTNAP1-204ENST00000591662 KDM2AQ9Y2K7 1162 aa14.32□□□□□ -0.12
CNTNAP1-204ENST00000591662 PRKCSHP14314 528 aaPredicted RBP14.3□□□□□ -0.12
CNTNAP1-204ENST00000591662 GSE1Q14687 1217 aa14.29□□□□□ -0.12
CNTNAP1-204ENST00000591662 RCAN3Q9UKA8 241 aa14.28□□□□□ -0.12
CNTNAP1-204ENST00000591662 GOLGA6L22H0YM25 854 aa14.27□□□□□ -0.12
CNTNAP1-204ENST00000591662 MS4A1P11836 297 aa14.27□□□□□ -0.12
CNTNAP1-204ENST00000591662 KIF21BO75037 1637 aa14.26□□□□□ -0.13
CNTNAP1-204ENST00000591662 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
CNTNAP1-204ENST00000591662 PDE3BQ13370 1112 aa14.26□□□□□ -0.13
CNTNAP1-204ENST00000591662 PRKRIP1Q9H875 184 aaPredicted RBP14.26□□□□□ -0.13
CNTNAP1-204ENST00000591662 FMN1Q68DA7 1419 aa14.26□□□□□ -0.13
CNTNAP1-204ENST00000591662 CARD11Q9BXL7 1154 aa14.25□□□□□ -0.13
CNTNAP1-204ENST00000591662 RRBP1Q9P2E9 1410 aaKnown RBP14.25□□□□□ -0.13
CNTNAP1-204ENST00000591662 CUX2O14529 1486 aa14.25□□□□□ -0.13
CNTNAP1-204ENST00000591662 CARMIL1Q5VZK9 1371 aa14.24□□□□□ -0.13
CNTNAP1-204ENST00000591662 PDE4AP27815 886 aa14.24□□□□□ -0.13
CNTNAP1-204ENST00000591662 RGS3P49796 1198 aa14.24□□□□□ -0.13
CNTNAP1-204ENST00000591662 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
CNTNAP1-204ENST00000591662 SMARCA2P51531 1590 aa14.24□□□□□ -0.13
CNTNAP1-204ENST00000591662 MSH5O43196 834 aa14.23□□□□□ -0.13
CNTNAP1-204ENST00000591662 TNNT2P45379 298 aaPredicted RBP14.22□□□□□ -0.13
CNTNAP1-204ENST00000591662 RALBP1Q15311 655 aa14.22□□□□□ -0.13
CNTNAP1-204ENST00000591662 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
CNTNAP1-204ENST00000591662 CFDP1Q9UEE9 299 aaPredicted RBP14.2□□□□□ -0.14
CNTNAP1-204ENST00000591662 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
CNTNAP1-204ENST00000591662 ROCK2O75116 1388 aaKnown RBP14.19□□□□□ -0.14
CNTNAP1-204ENST00000591662 ANO8Q9HCE9 1232 aaPredicted RBP14.18□□□□□ -0.14
CNTNAP1-204ENST00000591662 CDCA8Q53HL2 280 aa14.17□□□□□ -0.14
CNTNAP1-204ENST00000591662 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.14
CNTNAP1-204ENST00000591662 RGL3Q3MIN7 710 aa14.15□□□□□ -0.14
CNTNAP1-204ENST00000591662 MPHOSPH9Q99550 1183 aa14.15□□□□□ -0.14
CNTNAP1-204ENST00000591662 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
CNTNAP1-204ENST00000591662 KTN1Q86UP2 1357 aaKnown RBP14.15□□□□□ -0.15
CNTNAP1-204ENST00000591662 L3MBTL2Q969R5 705 aa14.14□□□□□ -0.15
CNTNAP1-204ENST00000591662 RRP1P56182 461 aaKnown RBP14.14□□□□□ -0.15
CNTNAP1-204ENST00000591662 CNTLNQ9NXG0 1405 aa14.13□□□□□ -0.15
CNTNAP1-204ENST00000591662 GOLGA6L3A6NEY3 463 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms