RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 WDR62O43379 1518 aa17.26■□□□□ 0.35
TPM4-213ENST00000591226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
TPM4-213ENST00000591226 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
TPM4-213ENST00000591226 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
TPM4-213ENST00000591226 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.353e-6■■■■□ 24.7
TPM4-213ENST00000591226 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
TPM4-213ENST00000591226 EFCAB5A4FU69 1503 aa17.2■□□□□ 0.34
TPM4-213ENST00000591226 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
TPM4-213ENST00000591226 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
TPM4-213ENST00000591226 IFT140Q96RY7 1462 aa17.18■□□□□ 0.34
TPM4-213ENST00000591226 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
TPM4-213ENST00000591226 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
TPM4-213ENST00000591226 ZNF608Q9ULD9 1512 aaPredicted RBP17.16■□□□□ 0.34
TPM4-213ENST00000591226 PCF11O94913 1555 aaKnown RBP17.16■□□□□ 0.34
TPM4-213ENST00000591226 THOC2Q8NI27 1593 aaKnown RBP17.15■□□□□ 0.34
TPM4-213ENST00000591226 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
TPM4-213ENST00000591226 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
TPM4-213ENST00000591226 TIAM1Q13009 1591 aa17.15■□□□□ 0.34
TPM4-213ENST00000591226 GRIN2BQ13224 1484 aa17.14■□□□□ 0.33
TPM4-213ENST00000591226 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
TPM4-213ENST00000591226 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
TPM4-213ENST00000591226 SAMD9Q5K651 1589 aa17.11■□□□□ 0.33
TPM4-213ENST00000591226 CFAP43Q8NDM7 1665 aa17.09■□□□□ 0.33
TPM4-213ENST00000591226 FYCO1Q9BQS8 1478 aa17.08■□□□□ 0.33
TPM4-213ENST00000591226 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.33
TPM4-213ENST00000591226 RRBP1Q9P2E9 1410 aaKnown RBP17.07■□□□□ 0.32
TPM4-213ENST00000591226 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
TPM4-213ENST00000591226 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
TPM4-213ENST00000591226 FMN1Q68DA7 1419 aa17.05■□□□□ 0.32
TPM4-213ENST00000591226 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
TPM4-213ENST00000591226 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
TPM4-213ENST00000591226 IQGAP2Q13576 1575 aa17.03■□□□□ 0.32
TPM4-213ENST00000591226 CCNB3Q8WWL7 1395 aa17.01■□□□□ 0.31
TPM4-213ENST00000591226 PHLDB1Q86UU1 1377 aa16.96■□□□□ 0.31
TPM4-213ENST00000591226 GRIN2AQ12879 1464 aa16.96■□□□□ 0.31
TPM4-213ENST00000591226 LRRIQ1Q96JM4 1722 aa16.95■□□□□ 0.3
TPM4-213ENST00000591226 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
TPM4-213ENST00000591226 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
TPM4-213ENST00000591226 KIAA0586Q9BVV6 1533 aa16.92■□□□□ 0.3
TPM4-213ENST00000591226 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
TPM4-213ENST00000591226 ITGAEP38570 1179 aa16.89■□□□□ 0.29
TPM4-213ENST00000591226 MYT1Q01538 1121 aa16.88■□□□□ 0.29
TPM4-213ENST00000591226 KCNA4P22459 653 aa16.87■□□□□ 0.29
TPM4-213ENST00000591226 MTUS2Q5JR59 1369 aa16.87■□□□□ 0.29
TPM4-213ENST00000591226 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
TPM4-213ENST00000591226 CEP170Q5SW79 1584 aa16.86■□□□□ 0.29
TPM4-213ENST00000591226 KIAA0556O60303 1618 aa16.86■□□□□ 0.29
TPM4-213ENST00000591226 HECW1Q76N89 1606 aa16.86■□□□□ 0.29
TPM4-213ENST00000591226 DISP1Q96F81 1524 aa16.85■□□□□ 0.29
TPM4-213ENST00000591226 FBLN2P98095 1184 aa16.84■□□□□ 0.29
TPM4-213ENST00000591226 FAM50AQ14320 339 aaKnown RBP16.84■□□□□ 0.29
TPM4-213ENST00000591226 CCDC18Q5T9S5 1454 aa16.83■□□□□ 0.29
TPM4-213ENST00000591226 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
TPM4-213ENST00000591226 EHBP1L1Q8N3D4 1523 aa16.82■□□□□ 0.28
TPM4-213ENST00000591226 MAGI3Q5TCQ9 1506 aa16.81■□□□□ 0.28
TPM4-213ENST00000591226 EPRSP07814 1512 aaKnown RBP16.8■□□□□ 0.28
TPM4-213ENST00000591226 NUP160Q12769 1436 aa16.8■□□□□ 0.28
TPM4-213ENST00000591226 NCOA2Q15596 1464 aa16.8■□□□□ 0.28
TPM4-213ENST00000591226 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
TPM4-213ENST00000591226 SUPT6HQ7KZ85 1726 aaKnown RBP16.79■□□□□ 0.28
TPM4-213ENST00000591226 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
TPM4-213ENST00000591226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.76■□□□□ 0.27
TPM4-213ENST00000591226 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
TPM4-213ENST00000591226 ARID3CA6NKF2 412 aa16.75■□□□□ 0.27
TPM4-213ENST00000591226 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
TPM4-213ENST00000591226 ARHGEF11O15085 1522 aa16.74■□□□□ 0.27
TPM4-213ENST00000591226 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
TPM4-213ENST00000591226 SETD5Q9C0A6 1442 aa16.73■□□□□ 0.27
TPM4-213ENST00000591226 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
TPM4-213ENST00000591226 NUP153P49790 1475 aaKnown RBP16.72■□□□□ 0.27
TPM4-213ENST00000591226 JPH4Q96JJ6 628 aa16.71■□□□□ 0.26
TPM4-213ENST00000591226 CARMIL2Q6F5E8 1435 aa16.69■□□□□ 0.26
TPM4-213ENST00000591226 PTPN23Q9H3S7 1636 aa16.68■□□□□ 0.26
TPM4-213ENST00000591226 PLB1Q6P1J6 1458 aa16.66■□□□□ 0.26
TPM4-213ENST00000591226 CHD1O14646 1710 aa16.66■□□□□ 0.26
TPM4-213ENST00000591226 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
TPM4-213ENST00000591226 MAPKBP1O60336 1514 aa16.63■□□□□ 0.25
TPM4-213ENST00000591226 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
TPM4-213ENST00000591226 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
TPM4-213ENST00000591226 HFM1A2PYH4 1435 aa16.59■□□□□ 0.25
TPM4-213ENST00000591226 MIA2Q96PC5 1412 aa16.59■□□□□ 0.25
TPM4-213ENST00000591226 PRG4Q92954 1404 aaPredicted RBP16.58■□□□□ 0.24
TPM4-213ENST00000591226 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.24
TPM4-213ENST00000591226 ABCA8O94911 1581 aa16.58■□□□□ 0.24
TPM4-213ENST00000591226 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
TPM4-213ENST00000591226 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
TPM4-213ENST00000591226 DIEXFQ68CQ4 756 aaKnown RBP16.55■□□□□ 0.24
TPM4-213ENST00000591226 NAIPQ13075 1403 aa16.55■□□□□ 0.24
TPM4-213ENST00000591226 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
TPM4-213ENST00000591226 SHROOM2Q13796 1616 aa16.52■□□□□ 0.24
TPM4-213ENST00000591226 KIF14Q15058 1648 aa16.52■□□□□ 0.23
TPM4-213ENST00000591226 ADCY10Q96PN6 1610 aa16.51■□□□□ 0.23
TPM4-213ENST00000591226 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
TPM4-213ENST00000591226 PTPRGP23470 1445 aa16.5■□□□□ 0.23
TPM4-213ENST00000591226 ATP10BO94823 1461 aa16.5■□□□□ 0.23
TPM4-213ENST00000591226 GCC2Q8IWJ2 1684 aa16.49■□□□□ 0.23
TPM4-213ENST00000591226 RRP7BPQ9NSQ0 103 aa16.48■□□□□ 0.23
TPM4-213ENST00000591226 ZNF644Q9H582 1327 aaPredicted RBP16.47■□□□□ 0.23
TPM4-213ENST00000591226 UACAQ9BZF9 1416 aa16.47■□□□□ 0.23
TPM4-213ENST00000591226 ITSN2Q9NZM3 1697 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms