RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 TDRD9Q8NDG6 1382 aaKnown RBP30.91■■■□□ 2.54
GCDH-214ENST00000591043 PBRM1Q86U86 1689 aa30.9■■■□□ 2.54
GCDH-214ENST00000591043 CCER1Q8TC90 406 aaPredicted RBP30.85■■■□□ 2.53
GCDH-214ENST00000591043 IFT140Q96RY7 1462 aa30.83■■■□□ 2.53
GCDH-214ENST00000591043 TIAM1Q13009 1591 aa30.82■■■□□ 2.52
GCDH-214ENST00000591043 AQRO60306 1485 aaKnown RBP eCLIP30.8■■■□□ 2.521e-6■■■■■ 36.8
GCDH-214ENST00000591043 THOC2Q8NI27 1593 aaKnown RBP30.8■■■□□ 2.52
GCDH-214ENST00000591043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.77■■■□□ 2.52
GCDH-214ENST00000591043 CFAP43Q8NDM7 1665 aa30.77■■■□□ 2.52
GCDH-214ENST00000591043 FYCO1Q9BQS8 1478 aa30.74■■■□□ 2.51
GCDH-214ENST00000591043 GRIN2BQ13224 1484 aa30.74■■■□□ 2.51
GCDH-214ENST00000591043 SAMD9Q5K651 1589 aa30.73■■■□□ 2.51
GCDH-214ENST00000591043 RRBP1Q9P2E9 1410 aaKnown RBP30.73■■■□□ 2.51
GCDH-214ENST00000591043 ADAMTS12P58397 1594 aa30.73■■■□□ 2.51
GCDH-214ENST00000591043 PCF11O94913 1555 aaKnown RBP30.71■■■□□ 2.51
GCDH-214ENST00000591043 FMN1Q68DA7 1419 aa30.71■■■□□ 2.51
GCDH-214ENST00000591043 KANK4Q5T7N3 995 aaPredicted RBP30.71■■■□□ 2.51
GCDH-214ENST00000591043 CASKIN1Q8WXD9 1431 aa30.68■■■□□ 2.5
GCDH-214ENST00000591043 FHOD3Q2V2M9 1422 aa30.64■■■□□ 2.5
GCDH-214ENST00000591043 LRRC9Q6ZRR7 1453 aa30.64■■■□□ 2.49
GCDH-214ENST00000591043 HNRNPUL2Q1KMD3 747 aaKnown RBP30.59■■■□□ 2.49
GCDH-214ENST00000591043 CCNB3Q8WWL7 1395 aa30.55■■■□□ 2.48
GCDH-214ENST00000591043 IQGAP2Q13576 1575 aa30.55■■■□□ 2.48
GCDH-214ENST00000591043 SNAPC4Q5SXM2 1469 aa30.51■■■□□ 2.47
GCDH-214ENST00000591043 EIF4G3O43432 1585 aaKnown RBP30.51■■■□□ 2.47
GCDH-214ENST00000591043 P3H3Q8IVL6 736 aa30.5■■■□□ 2.47
GCDH-214ENST00000591043 ZNF608Q9ULD9 1512 aaPredicted RBP30.49■■■□□ 2.47
GCDH-214ENST00000591043 MAGI1Q96QZ7 1491 aaPredicted RBP30.44■■■□□ 2.46
GCDH-214ENST00000591043 UGGT2Q9NYU1 1516 aa30.42■■■□□ 2.46
GCDH-214ENST00000591043 CLSPNQ9HAW4 1339 aa30.4■■■□□ 2.46
GCDH-214ENST00000591043 KIAA0586Q9BVV6 1533 aa30.36■■■□□ 2.45
GCDH-214ENST00000591043 CCDC18Q5T9S5 1454 aa30.36■■■□□ 2.45
GCDH-214ENST00000591043 GRIN2AQ12879 1464 aa30.35■■■□□ 2.45
GCDH-214ENST00000591043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.35■■■□□ 2.45
GCDH-214ENST00000591043 HECW1Q76N89 1606 aa30.33■■■□□ 2.45
GCDH-214ENST00000591043 ATP1B4Q9UN42 357 aaPredicted RBP30.33■■■□□ 2.45
GCDH-214ENST00000591043 LRRIQ1Q96JM4 1722 aa30.31■■■□□ 2.44
GCDH-214ENST00000591043 PHLDB1Q86UU1 1377 aa30.31■■■□□ 2.44
GCDH-214ENST00000591043 SYNJ2O15056 1496 aa30.28■■■□□ 2.44
GCDH-214ENST00000591043 EHBP1L1Q8N3D4 1523 aa30.28■■■□□ 2.44
GCDH-214ENST00000591043 SUPT6HQ7KZ85 1726 aaKnown RBP30.25■■■□□ 2.43
GCDH-214ENST00000591043 MTUS2Q5JR59 1369 aa30.25■■■□□ 2.43
GCDH-214ENST00000591043 KIAA0556O60303 1618 aa30.21■■■□□ 2.43
GCDH-214ENST00000591043 DHX57Q6P158 1386 aaKnown RBP30.18■■■□□ 2.42
GCDH-214ENST00000591043 FGD6Q6ZV73 1430 aa30.14■■■□□ 2.41
GCDH-214ENST00000591043 DISP1Q96F81 1524 aa30.13■■■□□ 2.41
GCDH-214ENST00000591043 CHMP7Q8WUX9 453 aaPredicted RBP30.11■■■□□ 2.41
GCDH-214ENST00000591043 EPRSP07814 1512 aaKnown RBP30.11■■■□□ 2.41
GCDH-214ENST00000591043 CEP170Q5SW79 1584 aa30.1■■■□□ 2.41
GCDH-214ENST00000591043 NCOA2Q15596 1464 aa30.1■■■□□ 2.41
GCDH-214ENST00000591043 NUP160Q12769 1436 aa30.1■■■□□ 2.41
GCDH-214ENST00000591043 SETD5Q9C0A6 1442 aa30.1■■■□□ 2.41
GCDH-214ENST00000591043 ARHGEF11O15085 1522 aa30.09■■■□□ 2.41
GCDH-214ENST00000591043 MYOM3Q5VTT5 1437 aa30.08■■■□□ 2.41
GCDH-214ENST00000591043 FAM50AQ14320 339 aaKnown RBP30.07■■■□□ 2.4
GCDH-214ENST00000591043 RAB3GAP2Q9H2M9 1393 aa30.03■■■□□ 2.4
GCDH-214ENST00000591043 RAPGEF6Q8TEU7 1601 aa30.02■■■□□ 2.4
GCDH-214ENST00000591043 ITGAEP38570 1179 aa30.02■■■□□ 2.4
GCDH-214ENST00000591043 CARMIL2Q6F5E8 1435 aa29.99■■■□□ 2.39
GCDH-214ENST00000591043 MAGI3Q5TCQ9 1506 aa29.99■■■□□ 2.39
GCDH-214ENST00000591043 PTPN23Q9H3S7 1636 aa29.95■■■□□ 2.38
GCDH-214ENST00000591043 TCOF1Q13428 1488 aaKnown RBP29.92■■■□□ 2.38
GCDH-214ENST00000591043 MIA2Q96PC5 1412 aa29.92■■■□□ 2.38
GCDH-214ENST00000591043 CDK13Q14004 1512 aaKnown RBP29.91■■■□□ 2.38
GCDH-214ENST00000591043 ZNF316A6NFI3 1004 aaPredicted RBP29.91■■■□□ 2.38
GCDH-214ENST00000591043 NUP153P49790 1475 aaKnown RBP29.89■■■□□ 2.38
GCDH-214ENST00000591043 OSCARQ8IYS5 282 aa29.89■■■□□ 2.38
GCDH-214ENST00000591043 CDK11AQ9UQ88 783 aaPredicted RBP29.87■■■□□ 2.37
GCDH-214ENST00000591043 FBLN2P98095 1184 aa29.86■■■□□ 2.37
GCDH-214ENST00000591043 JPH4Q96JJ6 628 aa29.84■■■□□ 2.37
GCDH-214ENST00000591043 HFM1A2PYH4 1435 aa29.83■■■□□ 2.37
GCDH-214ENST00000591043 MAPKBP1O60336 1514 aa29.81■■■□□ 2.36
GCDH-214ENST00000591043 DIEXFQ68CQ4 756 aaKnown RBP29.78■■■□□ 2.36
GCDH-214ENST00000591043 AKNAQ7Z591 1439 aa29.77■■■□□ 2.36
GCDH-214ENST00000591043 CHD1O14646 1710 aa29.75■■■□□ 2.35
GCDH-214ENST00000591043 ADCY10Q96PN6 1610 aa29.75■■■□□ 2.35
GCDH-214ENST00000591043 GCC2Q8IWJ2 1684 aa29.72■■■□□ 2.35
GCDH-214ENST00000591043 ABCA8O94911 1581 aa29.72■■■□□ 2.35
GCDH-214ENST00000591043 TROQ12816 1431 aaPredicted RBP29.72■■■□□ 2.35
GCDH-214ENST00000591043 ACIN1Q9UKV3 1341 aaKnown RBP29.71■■■□□ 2.35
GCDH-214ENST00000591043 ITSN2Q9NZM3 1697 aa29.71■■■□□ 2.35
GCDH-214ENST00000591043 PTPRKQ15262 1439 aa29.7■■■□□ 2.34
GCDH-214ENST00000591043 TIMELESSQ9UNS1 1208 aa29.69■■■□□ 2.34
GCDH-214ENST00000591043 PLB1Q6P1J6 1458 aa29.69■■■□□ 2.34
GCDH-214ENST00000591043 NAIPQ13075 1403 aa29.68■■■□□ 2.34
GCDH-214ENST00000591043 UACAQ9BZF9 1416 aa29.67■■■□□ 2.34
GCDH-214ENST00000591043 SHROOM2Q13796 1616 aa29.65■■■□□ 2.34
GCDH-214ENST00000591043 DNMT1P26358 1616 aaKnown RBP29.61■■■□□ 2.33
GCDH-214ENST00000591043 PRG4Q92954 1404 aaPredicted RBP29.6■■■□□ 2.33
GCDH-214ENST00000591043 ROCK1Q13464 1354 aa29.57■■■□□ 2.32
GCDH-214ENST00000591043 RIMBP3CA6NJZ7 1639 aa29.57■■■□□ 2.32
GCDH-214ENST00000591043 RIMBP3BA6NNM3 1639 aa29.57■■■□□ 2.32
GCDH-214ENST00000591043 RIMBP3Q9UFD9 1639 aa29.57■■■□□ 2.32
GCDH-214ENST00000591043 ARID3CA6NKF2 412 aa29.55■■■□□ 2.32
GCDH-214ENST00000591043 KIF14Q15058 1648 aa29.54■■■□□ 2.32
GCDH-214ENST00000591043 PTPRGP23470 1445 aa29.53■■■□□ 2.32
GCDH-214ENST00000591043 DAPK1P53355 1430 aa29.52■■■□□ 2.32
GCDH-214ENST00000591043 ATP10BO94823 1461 aa29.49■■■□□ 2.31
GCDH-214ENST00000591043 PLEKHD1A6NEE1 506 aa29.48■■■□□ 2.31
GCDH-214ENST00000591043 GPATCH8Q9UKJ3 1502 aaKnown RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms