RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 SCAF1Q9H7N4 1312 aaKnown RBP19.21■□□□□ 0.67
TUBD1-210ENST00000590498 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
TUBD1-210ENST00000590498 CEP170Q5SW79 1584 aa19.17■□□□□ 0.66
TUBD1-210ENST00000590498 NUP160Q12769 1436 aa19.17■□□□□ 0.66
TUBD1-210ENST00000590498 ADAMTS12P58397 1594 aa19.16■□□□□ 0.66
TUBD1-210ENST00000590498 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
TUBD1-210ENST00000590498 BIVM-ERCC5R4GMW8 1640 aa19.14■□□□□ 0.66
TUBD1-210ENST00000590498 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
TUBD1-210ENST00000590498 SHROOM2Q13796 1616 aa19.08■□□□□ 0.65
TUBD1-210ENST00000590498 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
TUBD1-210ENST00000590498 PRG4Q92954 1404 aaPredicted RBP19■□□□□ 0.63
TUBD1-210ENST00000590498 JPH4Q96JJ6 628 aa18.99■□□□□ 0.63
TUBD1-210ENST00000590498 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
TUBD1-210ENST00000590498 KIF13AQ9H1H9 1805 aa18.89■□□□□ 0.61
TUBD1-210ENST00000590498 IGF1RP08069 1367 aa18.87■□□□□ 0.61
TUBD1-210ENST00000590498 FAM69CQ0P6D2 419 aa18.81■□□□□ 0.6
TUBD1-210ENST00000590498 ABCC10Q5T3U5 1492 aa18.81■□□□□ 0.6
TUBD1-210ENST00000590498 ADCY10Q96PN6 1610 aa18.8■□□□□ 0.6
TUBD1-210ENST00000590498 KIAA0586Q9BVV6 1533 aa18.79■□□□□ 0.6
TUBD1-210ENST00000590498 MAPKBP1O60336 1514 aa18.77■□□□□ 0.6
TUBD1-210ENST00000590498 NPM1P06748 294 aaKnown RBP eCLIP18.76■□□□□ 0.59
TUBD1-210ENST00000590498 KIF27Q86VH2 1401 aa18.75■□□□□ 0.59
TUBD1-210ENST00000590498 DIP2BQ9P265 1576 aa18.74■□□□□ 0.59
TUBD1-210ENST00000590498 CUL7Q14999 1698 aa18.7■□□□□ 0.58
TUBD1-210ENST00000590498 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
TUBD1-210ENST00000590498 PTPRGP23470 1445 aa18.66■□□□□ 0.58
TUBD1-210ENST00000590498 CACNB1Q02641 598 aaPredicted RBP18.65■□□□□ 0.58
TUBD1-210ENST00000590498 TTBK1Q5TCY1 1321 aaPredicted RBP18.64■□□□□ 0.57
TUBD1-210ENST00000590498 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
TUBD1-210ENST00000590498 TNIKQ9UKE5 1360 aa18.6■□□□□ 0.57
TUBD1-210ENST00000590498 KDM6BO15054 1643 aa18.59■□□□□ 0.57
TUBD1-210ENST00000590498 ABCC2Q92887 1545 aa18.58■□□□□ 0.56
TUBD1-210ENST00000590498 TSPOAP1O95153 1857 aa18.57■□□□□ 0.56
TUBD1-210ENST00000590498 CARMIL2Q6F5E8 1435 aa18.57■□□□□ 0.56
TUBD1-210ENST00000590498 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
TUBD1-210ENST00000590498 IQGAP2Q13576 1575 aa18.55■□□□□ 0.56
TUBD1-210ENST00000590498 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
TUBD1-210ENST00000590498 ASXL2Q76L83 1435 aa18.55■□□□□ 0.56
TUBD1-210ENST00000590498 UHRF1BP1LA0JNW5 1464 aa18.52■□□□□ 0.56
TUBD1-210ENST00000590498 UACAQ9BZF9 1416 aa18.51■□□□□ 0.55
TUBD1-210ENST00000590498 DCAF8L1A6NGE4 600 aa18.51■□□□□ 0.55
TUBD1-210ENST00000590498 PPRC1Q5VV67 1664 aaKnown RBP18.5■□□□□ 0.55
TUBD1-210ENST00000590498 PLB1Q6P1J6 1458 aa18.49■□□□□ 0.55
TUBD1-210ENST00000590498 GLI2P10070 1586 aa18.49■□□□□ 0.55
TUBD1-210ENST00000590498 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
TUBD1-210ENST00000590498 RAPGEF2Q9Y4G8 1499 aa18.47■□□□□ 0.55
TUBD1-210ENST00000590498 HOXD11P31277 338 aaPredicted RBP18.47■□□□□ 0.55
TUBD1-210ENST00000590498 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
TUBD1-210ENST00000590498 KDM5BQ9UGL1 1544 aa18.46■□□□□ 0.55
TUBD1-210ENST00000590498 EPRSP07814 1512 aaKnown RBP18.44■□□□□ 0.54
TUBD1-210ENST00000590498 KIAA0556O60303 1618 aa18.41■□□□□ 0.54
TUBD1-210ENST00000590498 ZCCHC11Q5TAX3 1644 aaKnown RBP18.39■□□□□ 0.53
TUBD1-210ENST00000590498 MAP3K4Q9Y6R4 1608 aa18.39■□□□□ 0.53
TUBD1-210ENST00000590498 ADGRL1O94910 1474 aa18.33■□□□□ 0.53
TUBD1-210ENST00000590498 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
TUBD1-210ENST00000590498 WDR7Q9Y4E6 1490 aa18.31■□□□□ 0.52
TUBD1-210ENST00000590498 RNF39Q9H2S5 420 aa18.3■□□□□ 0.52
TUBD1-210ENST00000590498 TEX14Q8IWB6 1497 aa18.29■□□□□ 0.52
TUBD1-210ENST00000590498 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
TUBD1-210ENST00000590498 ABCA8O94911 1581 aa18.28■□□□□ 0.52
TUBD1-210ENST00000590498 CTTNBP2Q8WZ74 1663 aa18.27■□□□□ 0.52
TUBD1-210ENST00000590498 KCNH8Q96L42 1107 aa18.26■□□□□ 0.51
TUBD1-210ENST00000590498 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
TUBD1-210ENST00000590498 GOLGA3Q08378 1498 aa18.24■□□□□ 0.51
TUBD1-210ENST00000590498 CD109Q6YHK3 1445 aa18.23■□□□□ 0.51
TUBD1-210ENST00000590498 MAGI3Q5TCQ9 1506 aa18.22■□□□□ 0.51
TUBD1-210ENST00000590498 ILDR1Q86SU0 546 aaPredicted RBP18.2■□□□□ 0.5
TUBD1-210ENST00000590498 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
TUBD1-210ENST00000590498 ARID3CA6NKF2 412 aa18.18■□□□□ 0.5
TUBD1-210ENST00000590498 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
TUBD1-210ENST00000590498 ATP10BO94823 1461 aa18.16■□□□□ 0.5
TUBD1-210ENST00000590498 HECW2Q9P2P5 1572 aa18.13■□□□□ 0.49
TUBD1-210ENST00000590498 ARAP3Q8WWN8 1544 aa18.1■□□□□ 0.49
TUBD1-210ENST00000590498 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
TUBD1-210ENST00000590498 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
TUBD1-210ENST00000590498 KIF21BO75037 1637 aa18.06■□□□□ 0.48
TUBD1-210ENST00000590498 ABCA9Q8IUA7 1624 aa18.05■□□□□ 0.48
TUBD1-210ENST00000590498 RAPGEF3O95398 923 aa18.04■□□□□ 0.48
TUBD1-210ENST00000590498 C1QBPQ07021 282 aaKnown RBP18.04■□□□□ 0.48
TUBD1-210ENST00000590498 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
TUBD1-210ENST00000590498 NUP153P49790 1475 aaKnown RBP18.01■□□□□ 0.47
TUBD1-210ENST00000590498 RANGAP1P46060 587 aaPredicted RBP17.99■□□□□ 0.47
TUBD1-210ENST00000590498 FAM9AQ8IZU1 332 aaPredicted RBP17.98■□□□□ 0.47
TUBD1-210ENST00000590498 PHLDB1Q86UU1 1377 aa17.98■□□□□ 0.47
TUBD1-210ENST00000590498 FHOD3Q2V2M9 1422 aa17.97■□□□□ 0.47
TUBD1-210ENST00000590498 FRMPD1Q5SYB0 1578 aa17.96■□□□□ 0.47
TUBD1-210ENST00000590498 NEO1Q92859 1461 aa17.96■□□□□ 0.47
TUBD1-210ENST00000590498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
TUBD1-210ENST00000590498 HNRNPUL2Q1KMD3 747 aaKnown RBP17.96■□□□□ 0.47
TUBD1-210ENST00000590498 ADAMTSL3P82987 1691 aa17.95■□□□□ 0.46
TUBD1-210ENST00000590498 PTPRMP28827 1452 aa17.94■□□□□ 0.46
TUBD1-210ENST00000590498 EEA1Q15075 1411 aa17.89■□□□□ 0.45
TUBD1-210ENST00000590498 PLEKHD1A6NEE1 506 aa17.88■□□□□ 0.45
TUBD1-210ENST00000590498 BCORL1Q5H9F3 1711 aa17.87■□□□□ 0.45
TUBD1-210ENST00000590498 AKNAQ7Z591 1439 aa17.86■□□□□ 0.45
TUBD1-210ENST00000590498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.86■□□□□ 0.45
TUBD1-210ENST00000590498 MADDQ8WXG6 1647 aa17.84■□□□□ 0.45
TUBD1-210ENST00000590498 DENND4BO75064 1496 aaPredicted RBP17.84■□□□□ 0.45
TUBD1-210ENST00000590498 ARID4BQ4LE39 1312 aaPredicted RBP17.84■□□□□ 0.45
TUBD1-210ENST00000590498 RICTORQ6R327 1708 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms