RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 JPH4Q96JJ6 628 aa36.58■■■■□ 3.45
LRP3-202ENST00000590275 PRG4Q92954 1404 aaPredicted RBP36.53■■■■□ 3.44
LRP3-202ENST00000590275 KIAA0586Q9BVV6 1533 aa36.49■■■■□ 3.43
LRP3-202ENST00000590275 RAPGEF2Q9Y4G8 1499 aa36.34■■■■□ 3.41
LRP3-202ENST00000590275 TRHP20396 242 aaPredicted RBP36.25■■■■□ 3.39
LRP3-202ENST00000590275 PRXQ9BXM0 1461 aa36.22■■■■□ 3.39
LRP3-202ENST00000590275 IQGAP2Q13576 1575 aa36.19■■■■□ 3.38
LRP3-202ENST00000590275 CHIC1Q5VXU3 224 aa36.09■■■■□ 3.37
LRP3-202ENST00000590275 DISP1Q96F81 1524 aa36.08■■■■□ 3.37
LRP3-202ENST00000590275 CSRNP3Q8WYN3 585 aa36.06■■■■□ 3.36
LRP3-202ENST00000590275 UGGT2Q9NYU1 1516 aa36.03■■■■□ 3.36
LRP3-202ENST00000590275 ADCY10Q96PN6 1610 aa36.03■■■■□ 3.36
LRP3-202ENST00000590275 PTPRGP23470 1445 aa36.02■■■■□ 3.36
LRP3-202ENST00000590275 TTBK1Q5TCY1 1321 aaPredicted RBP36.01■■■■□ 3.35
LRP3-202ENST00000590275 TNIKQ9UKE5 1360 aa36.01■■■■□ 3.35
LRP3-202ENST00000590275 CARMIL2Q6F5E8 1435 aa36■■■■□ 3.35
LRP3-202ENST00000590275 FAM9AQ8IZU1 332 aaPredicted RBP35.95■■■■□ 3.35
LRP3-202ENST00000590275 EEA1Q15075 1411 aa35.91■■■■□ 3.34
LRP3-202ENST00000590275 CTTNBP2Q8WZ74 1663 aa35.9■■■■□ 3.34
LRP3-202ENST00000590275 KIAA0556O60303 1618 aa35.89■■■■□ 3.34
LRP3-202ENST00000590275 NPM1P06748 294 aaKnown RBP eCLIP35.8■■■■□ 3.32
LRP3-202ENST00000590275 MAPKBP1O60336 1514 aa35.79■■■■□ 3.32
LRP3-202ENST00000590275 UACAQ9BZF9 1416 aa35.77■■■■□ 3.32
LRP3-202ENST00000590275 UHRF1BP1LA0JNW5 1464 aa35.75■■■■□ 3.31
LRP3-202ENST00000590275 ABCC2Q92887 1545 aa35.73■■■■□ 3.31
LRP3-202ENST00000590275 ABCC10Q5T3U5 1492 aa35.72■■■■□ 3.31
LRP3-202ENST00000590275 KIF13AQ9H1H9 1805 aa35.71■■■■□ 3.31
LRP3-202ENST00000590275 GOLGA3Q08378 1498 aa35.68■■■■□ 3.3
LRP3-202ENST00000590275 FAM69CQ0P6D2 419 aa35.67■■■■□ 3.3
LRP3-202ENST00000590275 PLB1Q6P1J6 1458 aa35.66■■■■□ 3.3
LRP3-202ENST00000590275 P3H3Q8IVL6 736 aa35.64■■■■□ 3.3
LRP3-202ENST00000590275 DIP2BQ9P265 1576 aa35.64■■■■□ 3.3
LRP3-202ENST00000590275 KIF21BO75037 1637 aa35.63■■■■□ 3.29
LRP3-202ENST00000590275 KDM5BQ9UGL1 1544 aa35.61■■■■□ 3.29
LRP3-202ENST00000590275 ASXL2Q76L83 1435 aa35.58■■■■□ 3.29
LRP3-202ENST00000590275 ABCA8O94911 1581 aa35.56■■■■□ 3.28
LRP3-202ENST00000590275 EHMT2Q96KQ7 1210 aa35.56■■■■□ 3.28
LRP3-202ENST00000590275 SAMD9Q5K651 1589 aa35.55■■■■□ 3.28
LRP3-202ENST00000590275 RANGAP1P46060 587 aaPredicted RBP35.52■■■■□ 3.28
LRP3-202ENST00000590275 ZCCHC11Q5TAX3 1644 aaKnown RBP35.5■■■■□ 3.27
LRP3-202ENST00000590275 FHOD3Q2V2M9 1422 aa35.4■■■■□ 3.26
LRP3-202ENST00000590275 EPRSP07814 1512 aaKnown RBP35.37■■■■□ 3.25
LRP3-202ENST00000590275 ARID3CA6NKF2 412 aa35.35■■■■□ 3.25
LRP3-202ENST00000590275 UBTFP17480 764 aaKnown RBP35.35■■■■□ 3.25
LRP3-202ENST00000590275 GLI2P10070 1586 aa35.34■■■■□ 3.25
LRP3-202ENST00000590275 ATP10BO94823 1461 aa35.31■■■■□ 3.24
LRP3-202ENST00000590275 WDR7Q9Y4E6 1490 aa35.3■■■■□ 3.24
LRP3-202ENST00000590275 TSPOAP1O95153 1857 aa35.26■■■■□ 3.24
LRP3-202ENST00000590275 PPRC1Q5VV67 1664 aaKnown RBP35.24■■■■□ 3.23
LRP3-202ENST00000590275 EFCAB5A4FU69 1503 aa35.24■■■■□ 3.23
LRP3-202ENST00000590275 RAPGEF6Q8TEU7 1601 aa35.23■■■■□ 3.23
LRP3-202ENST00000590275 NUP153P49790 1475 aaKnown RBP35.22■■■■□ 3.23
LRP3-202ENST00000590275 MAP3K4Q9Y6R4 1608 aa35.18■■■■□ 3.22
LRP3-202ENST00000590275 ARHGAP35Q9NRY4 1499 aa35.18■■■■□ 3.22
LRP3-202ENST00000590275 KCNH8Q96L42 1107 aa35.17■■■■□ 3.22
LRP3-202ENST00000590275 KDM6BO15054 1643 aa35.09■■■■□ 3.21
LRP3-202ENST00000590275 COL17A1Q9UMD9 1497 aaPredicted RBP35.08■■■■□ 3.21
LRP3-202ENST00000590275 CD109Q6YHK3 1445 aa35.02■■■■□ 3.2
LRP3-202ENST00000590275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35■■■■□ 3.19
LRP3-202ENST00000590275 HNRNPUL2Q1KMD3 747 aaKnown RBP35■■■■□ 3.19
LRP3-202ENST00000590275 MAGI3Q5TCQ9 1506 aa34.96■■■■□ 3.19
LRP3-202ENST00000590275 TEX14Q8IWB6 1497 aa34.95■■■■□ 3.19
LRP3-202ENST00000590275 CFAP43Q8NDM7 1665 aa34.95■■■■□ 3.18
LRP3-202ENST00000590275 CDK13Q14004 1512 aaKnown RBP34.94■■■■□ 3.18
LRP3-202ENST00000590275 FMN1Q68DA7 1419 aa34.92■■■■□ 3.18
LRP3-202ENST00000590275 ABCA9Q8IUA7 1624 aa34.88■■■■□ 3.17
LRP3-202ENST00000590275 PLEKHD1A6NEE1 506 aa34.84■■■■□ 3.17
LRP3-202ENST00000590275 ATP1B4Q9UN42 357 aaPredicted RBP34.83■■■■□ 3.17
LRP3-202ENST00000590275 CLIP1P30622 1438 aa34.79■■■■□ 3.16
LRP3-202ENST00000590275 HECW1Q76N89 1606 aa34.78■■■■□ 3.16
LRP3-202ENST00000590275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.74■■■■□ 3.15
LRP3-202ENST00000590275 LRRIQ1Q96JM4 1722 aa34.72■■■■□ 3.15
LRP3-202ENST00000590275 PCF11O94913 1555 aaKnown RBP34.71■■■■□ 3.15
LRP3-202ENST00000590275 CASKIN1Q8WXD9 1431 aa34.7■■■■□ 3.15
LRP3-202ENST00000590275 LOC105371045A0A1W2PR82 267 aa34.68■■■■□ 3.14
LRP3-202ENST00000590275 TTC37Q6PGP7 1564 aa34.68■■■■□ 3.14
LRP3-202ENST00000590275 ARAP3Q8WWN8 1544 aa34.67■■■■□ 3.14
LRP3-202ENST00000590275 KDM4FA0A1W2PPD8 638 aa34.64■■■■□ 3.14
LRP3-202ENST00000590275 NEO1Q92859 1461 aa34.61■■■■□ 3.13
LRP3-202ENST00000590275 TROQ12816 1431 aaPredicted RBP34.58■■■■□ 3.13
LRP3-202ENST00000590275 CEP162Q5TB80 1403 aa34.58■■■■□ 3.13
LRP3-202ENST00000590275 RAPGEF3O95398 923 aa34.58■■■■□ 3.13
LRP3-202ENST00000590275 KIF14Q15058 1648 aa34.57■■■■□ 3.12
LRP3-202ENST00000590275 AEBP2Q6ZN18 517 aaPredicted RBP34.57■■■■□ 3.12
LRP3-202ENST00000590275 PHLDB1Q86UU1 1377 aa34.56■■■■□ 3.12
LRP3-202ENST00000590275 FYCO1Q9BQS8 1478 aa34.55■■■■□ 3.12
LRP3-202ENST00000590275 CDK11AQ9UQ88 783 aaPredicted RBP34.53■■■■□ 3.12
LRP3-202ENST00000590275 FANCAO15360 1455 aa34.52■■■■□ 3.12
LRP3-202ENST00000590275 PLCH2O75038 1416 aa34.51■■■■□ 3.12
LRP3-202ENST00000590275 FRMPD1Q5SYB0 1578 aa34.51■■■■□ 3.12
LRP3-202ENST00000590275 AKNAQ7Z591 1439 aa34.51■■■■□ 3.12
LRP3-202ENST00000590275 CCDC18Q5T9S5 1454 aa34.5■■■■□ 3.11
LRP3-202ENST00000590275 ADGRL1O94910 1474 aa34.42■■■■□ 3.1
LRP3-202ENST00000590275 DENND4BO75064 1496 aaPredicted RBP34.39■■■■□ 3.1
LRP3-202ENST00000590275 CFAP74Q9C0B2 1584 aa34.36■■■■□ 3.09
LRP3-202ENST00000590275 RICTORQ6R327 1708 aa34.34■■■■□ 3.09
LRP3-202ENST00000590275 MYO5CQ9NQX4 1742 aa34.33■■■■□ 3.09
LRP3-202ENST00000590275 SCAPERQ9BY12 1400 aa34.32■■■■□ 3.08
LRP3-202ENST00000590275 EFCAB2Q5VUJ9 269 aa34.32■■■■□ 3.08
LRP3-202ENST00000590275 ARHGAP5Q13017 1502 aa34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms