RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
NEDD4L-228ENST00000590248 PRG4Q92954 1404 aaPredicted RBP23.58■■□□□ 1.36
NEDD4L-228ENST00000590248 CARMIL1Q5VZK9 1371 aa23.56■■□□□ 1.36
NEDD4L-228ENST00000590248 KIAA0586Q9BVV6 1533 aa23.49■■□□□ 1.35
NEDD4L-228ENST00000590248 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
NEDD4L-228ENST00000590248 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
NEDD4L-228ENST00000590248 IQGAP2Q13576 1575 aa23.33■■□□□ 1.33
NEDD4L-228ENST00000590248 ADCY10Q96PN6 1610 aa23.28■■□□□ 1.32
NEDD4L-228ENST00000590248 PTPRGP23470 1445 aa23.25■■□□□ 1.31
NEDD4L-228ENST00000590248 NPM1P06748 294 aaKnown RBP eCLIP23.24■■□□□ 1.31
NEDD4L-228ENST00000590248 KIF13AQ9H1H9 1805 aa23.24■■□□□ 1.31
NEDD4L-228ENST00000590248 CARMIL2Q6F5E8 1435 aa23.24■■□□□ 1.31
NEDD4L-228ENST00000590248 TNIKQ9UKE5 1360 aa23.21■■□□□ 1.31
NEDD4L-228ENST00000590248 DISP1Q96F81 1524 aa23.21■■□□□ 1.31
NEDD4L-228ENST00000590248 CTTNBP2Q8WZ74 1663 aa23.21■■□□□ 1.31
NEDD4L-228ENST00000590248 PRXQ9BXM0 1461 aa23.19■■□□□ 1.3
NEDD4L-228ENST00000590248 UGGT2Q9NYU1 1516 aa23.17■■□□□ 1.3
NEDD4L-228ENST00000590248 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
NEDD4L-228ENST00000590248 FAM9AQ8IZU1 332 aaPredicted RBP23.13■■□□□ 1.29
NEDD4L-228ENST00000590248 KIAA0556O60303 1618 aa23.12■■□□□ 1.29
NEDD4L-228ENST00000590248 FAM69CQ0P6D2 419 aa23.12■■□□□ 1.29
NEDD4L-228ENST00000590248 MAPKBP1O60336 1514 aa23.12■■□□□ 1.29
NEDD4L-228ENST00000590248 ABCC10Q5T3U5 1492 aa23.09■■□□□ 1.29
NEDD4L-228ENST00000590248 UACAQ9BZF9 1416 aa23.07■■□□□ 1.28
NEDD4L-228ENST00000590248 DIP2BQ9P265 1576 aa23.06■■□□□ 1.28
NEDD4L-228ENST00000590248 ABCC2Q92887 1545 aa23.04■■□□□ 1.28
NEDD4L-228ENST00000590248 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
NEDD4L-228ENST00000590248 TSPOAP1O95153 1857 aa23.04■■□□□ 1.28
NEDD4L-228ENST00000590248 UHRF1BP1LA0JNW5 1464 aa23.01■■□□□ 1.27
NEDD4L-228ENST00000590248 P3H3Q8IVL6 736 aa23■■□□□ 1.27
NEDD4L-228ENST00000590248 EEA1Q15075 1411 aa22.99■■□□□ 1.27
NEDD4L-228ENST00000590248 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
NEDD4L-228ENST00000590248 ASXL2Q76L83 1435 aa22.97■■□□□ 1.27
NEDD4L-228ENST00000590248 PLB1Q6P1J6 1458 aa22.97■■□□□ 1.27
NEDD4L-228ENST00000590248 RANGAP1P46060 587 aaPredicted RBP22.95■■□□□ 1.26
NEDD4L-228ENST00000590248 ZCCHC11Q5TAX3 1644 aaKnown RBP22.95■■□□□ 1.26
NEDD4L-228ENST00000590248 KDM5BQ9UGL1 1544 aa22.93■■□□□ 1.26
NEDD4L-228ENST00000590248 EHMT2Q96KQ7 1210 aa22.93■■□□□ 1.26
NEDD4L-228ENST00000590248 ABCA8O94911 1581 aa22.89■■□□□ 1.25
NEDD4L-228ENST00000590248 ARID3CA6NKF2 412 aa22.85■■□□□ 1.25
NEDD4L-228ENST00000590248 KIF21BO75037 1637 aa22.85■■□□□ 1.25
NEDD4L-228ENST00000590248 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
NEDD4L-228ENST00000590248 GLI2P10070 1586 aa22.83■■□□□ 1.25
NEDD4L-228ENST00000590248 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
NEDD4L-228ENST00000590248 PPRC1Q5VV67 1664 aaKnown RBP22.82■■□□□ 1.24
NEDD4L-228ENST00000590248 KDM6BO15054 1643 aa22.79■■□□□ 1.24
NEDD4L-228ENST00000590248 KCNH8Q96L42 1107 aa22.78■■□□□ 1.24
NEDD4L-228ENST00000590248 WDR7Q9Y4E6 1490 aa22.77■■□□□ 1.24
NEDD4L-228ENST00000590248 UBTFP17480 764 aaKnown RBP22.76■■□□□ 1.23
NEDD4L-228ENST00000590248 MAP3K4Q9Y6R4 1608 aa22.75■■□□□ 1.23
NEDD4L-228ENST00000590248 FHOD3Q2V2M9 1422 aa22.75■■□□□ 1.23
NEDD4L-228ENST00000590248 ATP10BO94823 1461 aa22.73■■□□□ 1.23
NEDD4L-228ENST00000590248 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
NEDD4L-228ENST00000590248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.67■■□□□ 1.22
NEDD4L-228ENST00000590248 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
NEDD4L-228ENST00000590248 AEBP2Q6ZN18 517 aaPredicted RBP22.67■■□□□ 1.22
NEDD4L-228ENST00000590248 EFCAB5A4FU69 1503 aa22.64■■□□□ 1.21
NEDD4L-228ENST00000590248 COL17A1Q9UMD9 1497 aaPredicted RBP22.64■■□□□ 1.21
NEDD4L-228ENST00000590248 CFAP43Q8NDM7 1665 aa22.63■■□□□ 1.21
NEDD4L-228ENST00000590248 NUP153P49790 1475 aaKnown RBP22.63■■□□□ 1.21
NEDD4L-228ENST00000590248 CD109Q6YHK3 1445 aa22.63■■□□□ 1.21
NEDD4L-228ENST00000590248 TEX14Q8IWB6 1497 aa22.61■■□□□ 1.21
NEDD4L-228ENST00000590248 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
NEDD4L-228ENST00000590248 MAGI3Q5TCQ9 1506 aa22.55■■□□□ 1.2
NEDD4L-228ENST00000590248 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
NEDD4L-228ENST00000590248 ABCA9Q8IUA7 1624 aa22.51■■□□□ 1.19
NEDD4L-228ENST00000590248 PLEKHD1A6NEE1 506 aa22.5■■□□□ 1.19
NEDD4L-228ENST00000590248 CDK13Q14004 1512 aaKnown RBP22.48■■□□□ 1.19
NEDD4L-228ENST00000590248 KDM4FA0A1W2PPD8 638 aa22.48■■□□□ 1.19
NEDD4L-228ENST00000590248 FMN1Q68DA7 1419 aa22.44■■□□□ 1.18
NEDD4L-228ENST00000590248 LRRIQ1Q96JM4 1722 aa22.4■■□□□ 1.18
NEDD4L-228ENST00000590248 HECW1Q76N89 1606 aa22.4■■□□□ 1.18
NEDD4L-228ENST00000590248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.38■■□□□ 1.17
NEDD4L-228ENST00000590248 ARAP3Q8WWN8 1544 aa22.36■■□□□ 1.17
NEDD4L-228ENST00000590248 TTC37Q6PGP7 1564 aa22.35■■□□□ 1.17
NEDD4L-228ENST00000590248 RAPGEF3O95398 923 aa22.35■■□□□ 1.17
NEDD4L-228ENST00000590248 ADGRL1O94910 1474 aa22.32■■□□□ 1.16
NEDD4L-228ENST00000590248 NEO1Q92859 1461 aa22.32■■□□□ 1.16
NEDD4L-228ENST00000590248 PHLDB1Q86UU1 1377 aa22.31■■□□□ 1.16
NEDD4L-228ENST00000590248 CLIP1P30622 1438 aa22.3■■□□□ 1.16
NEDD4L-228ENST00000590248 PCF11O94913 1555 aaKnown RBP22.29■■□□□ 1.16
NEDD4L-228ENST00000590248 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
NEDD4L-228ENST00000590248 FANCAO15360 1455 aa22.28■■□□□ 1.16
NEDD4L-228ENST00000590248 KIF14Q15058 1648 aa22.28■■□□□ 1.16
NEDD4L-228ENST00000590248 AKNAQ7Z591 1439 aa22.26■■□□□ 1.15
NEDD4L-228ENST00000590248 CASKIN1Q8WXD9 1431 aa22.25■■□□□ 1.15
NEDD4L-228ENST00000590248 FRMPD1Q5SYB0 1578 aa22.25■■□□□ 1.15
NEDD4L-228ENST00000590248 RICTORQ6R327 1708 aa22.23■■□□□ 1.15
NEDD4L-228ENST00000590248 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
NEDD4L-228ENST00000590248 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
NEDD4L-228ENST00000590248 PLCH2O75038 1416 aa22.22■■□□□ 1.15
NEDD4L-228ENST00000590248 CFAP74Q9C0B2 1584 aa22.21■■□□□ 1.15
NEDD4L-228ENST00000590248 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
NEDD4L-228ENST00000590248 DENND4BO75064 1496 aaPredicted RBP22.2■■□□□ 1.14
NEDD4L-228ENST00000590248 CCDC18Q5T9S5 1454 aa22.17■■□□□ 1.14
NEDD4L-228ENST00000590248 FYCO1Q9BQS8 1478 aa22.16■■□□□ 1.14
NEDD4L-228ENST00000590248 EFCAB2Q5VUJ9 269 aa22.14■■□□□ 1.13
NEDD4L-228ENST00000590248 CDC42BPBQ9Y5S2 1711 aa22.14■■□□□ 1.13
NEDD4L-228ENST00000590248 SCAPERQ9BY12 1400 aa22.14■■□□□ 1.13
NEDD4L-228ENST00000590248 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms