RNA–Protein interactions for RNA: ENST00000590234.5

CXXC1-213, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-213ENST00000590234 KIAA0586Q9BVV6 1533 aa24.56■■□□□ 1.52
CXXC1-213ENST00000590234 CYB5RLQ6IPT4 315 aa24.56■■□□□ 1.52
CXXC1-213ENST00000590234 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
CXXC1-213ENST00000590234 EEA1Q15075 1411 aa24.52■■□□□ 1.52
CXXC1-213ENST00000590234 JPH4Q96JJ6 628 aa24.52■■□□□ 1.52
CXXC1-213ENST00000590234 PRXQ9BXM0 1461 aa24.51■■□□□ 1.51
CXXC1-213ENST00000590234 PRG4Q92954 1404 aaPredicted RBP24.5■■□□□ 1.51
CXXC1-213ENST00000590234 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
CXXC1-213ENST00000590234 IQGAP2Q13576 1575 aa24.46■■□□□ 1.51
CXXC1-213ENST00000590234 FAM9AQ8IZU1 332 aaPredicted RBP24.4■■□□□ 1.5
CXXC1-213ENST00000590234 CTTNBP2Q8WZ74 1663 aa24.39■■□□□ 1.49
CXXC1-213ENST00000590234 CARMIL2Q6F5E8 1435 aa24.31■■□□□ 1.48
CXXC1-213ENST00000590234 UGGT2Q9NYU1 1516 aa24.3■■□□□ 1.48
CXXC1-213ENST00000590234 KIF21BO75037 1637 aa24.28■■□□□ 1.48
CXXC1-213ENST00000590234 DISP1Q96F81 1524 aa24.26■■□□□ 1.47
CXXC1-213ENST00000590234 KIAA0556O60303 1618 aa24.23■■□□□ 1.47
CXXC1-213ENST00000590234 TNIKQ9UKE5 1360 aa24.22■■□□□ 1.47
CXXC1-213ENST00000590234 PTPRGP23470 1445 aa24.2■■□□□ 1.46
CXXC1-213ENST00000590234 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
CXXC1-213ENST00000590234 TTBK1Q5TCY1 1321 aaPredicted RBP24.16■■□□□ 1.46
CXXC1-213ENST00000590234 ADCY10Q96PN6 1610 aa24.14■■□□□ 1.46
CXXC1-213ENST00000590234 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
CXXC1-213ENST00000590234 TRHP20396 242 aaPredicted RBP24.07■■□□□ 1.44
CXXC1-213ENST00000590234 SAMD9Q5K651 1589 aa24.07■■□□□ 1.44
CXXC1-213ENST00000590234 UACAQ9BZF9 1416 aa24.05■■□□□ 1.44
CXXC1-213ENST00000590234 NPM1P06748 294 aaKnown RBP eCLIP24.05■■□□□ 1.44
CXXC1-213ENST00000590234 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
CXXC1-213ENST00000590234 UHRF1BP1LA0JNW5 1464 aa24.03■■□□□ 1.44
CXXC1-213ENST00000590234 ABCC2Q92887 1545 aa24.02■■□□□ 1.44
CXXC1-213ENST00000590234 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
CXXC1-213ENST00000590234 P3H3Q8IVL6 736 aa24■■□□□ 1.43
CXXC1-213ENST00000590234 MAPKBP1O60336 1514 aa23.99■■□□□ 1.43
CXXC1-213ENST00000590234 EFCAB5A4FU69 1503 aa23.96■■□□□ 1.43
CXXC1-213ENST00000590234 PLB1Q6P1J6 1458 aa23.96■■□□□ 1.43
CXXC1-213ENST00000590234 ABCA8O94911 1581 aa23.95■■□□□ 1.42
CXXC1-213ENST00000590234 KDM5BQ9UGL1 1544 aa23.91■■□□□ 1.42
CXXC1-213ENST00000590234 FHOD3Q2V2M9 1422 aa23.91■■□□□ 1.42
CXXC1-213ENST00000590234 ZCCHC11Q5TAX3 1644 aaKnown RBP23.88■■□□□ 1.41
CXXC1-213ENST00000590234 ABCC10Q5T3U5 1492 aa23.87■■□□□ 1.41
CXXC1-213ENST00000590234 KIF13AQ9H1H9 1805 aa23.87■■□□□ 1.41
CXXC1-213ENST00000590234 ASXL2Q76L83 1435 aa23.84■■□□□ 1.41
CXXC1-213ENST00000590234 DIP2BQ9P265 1576 aa23.84■■□□□ 1.41
CXXC1-213ENST00000590234 RAPGEF6Q8TEU7 1601 aa23.84■■□□□ 1.41
CXXC1-213ENST00000590234 ARHGAP35Q9NRY4 1499 aa23.83■■□□□ 1.41
CXXC1-213ENST00000590234 FAM69CQ0P6D2 419 aa23.8■■□□□ 1.4
CXXC1-213ENST00000590234 ARID3CA6NKF2 412 aa23.73■■□□□ 1.39
CXXC1-213ENST00000590234 FMN1Q68DA7 1419 aa23.73■■□□□ 1.39
CXXC1-213ENST00000590234 ATP10BO94823 1461 aa23.73■■□□□ 1.39
CXXC1-213ENST00000590234 NUP153P49790 1475 aaKnown RBP23.73■■□□□ 1.39
CXXC1-213ENST00000590234 WDR7Q9Y4E6 1490 aa23.73■■□□□ 1.39
CXXC1-213ENST00000590234 GLI2P10070 1586 aa23.7■■□□□ 1.38
CXXC1-213ENST00000590234 EPRSP07814 1512 aaKnown RBP23.7■■□□□ 1.38
CXXC1-213ENST00000590234 CLIP1P30622 1438 aa23.69■■□□□ 1.38
CXXC1-213ENST00000590234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.65■■□□□ 1.38
CXXC1-213ENST00000590234 HNRNPUL2Q1KMD3 747 aaKnown RBP23.65■■□□□ 1.38
CXXC1-213ENST00000590234 HECW1Q76N89 1606 aa23.64■■□□□ 1.38
CXXC1-213ENST00000590234 TSPOAP1O95153 1857 aa23.63■■□□□ 1.37
CXXC1-213ENST00000590234 MAP3K4Q9Y6R4 1608 aa23.6■■□□□ 1.37
CXXC1-213ENST00000590234 LOC105371045A0A1W2PR82 267 aa23.6■■□□□ 1.37
CXXC1-213ENST00000590234 KCNH8Q96L42 1107 aa23.6■■□□□ 1.37
CXXC1-213ENST00000590234 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
CXXC1-213ENST00000590234 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
CXXC1-213ENST00000590234 CDK13Q14004 1512 aaKnown RBP23.57■■□□□ 1.36
CXXC1-213ENST00000590234 PCF11O94913 1555 aaKnown RBP23.57■■□□□ 1.36
CXXC1-213ENST00000590234 PPRC1Q5VV67 1664 aaKnown RBP23.56■■□□□ 1.36
CXXC1-213ENST00000590234 CFAP43Q8NDM7 1665 aa23.55■■□□□ 1.36
CXXC1-213ENST00000590234 CASKIN1Q8WXD9 1431 aa23.54■■□□□ 1.36
CXXC1-213ENST00000590234 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.36
CXXC1-213ENST00000590234 FYCO1Q9BQS8 1478 aa23.5■■□□□ 1.35
CXXC1-213ENST00000590234 LRRIQ1Q96JM4 1722 aa23.5■■□□□ 1.35
CXXC1-213ENST00000590234 CD109Q6YHK3 1445 aa23.5■■□□□ 1.35
CXXC1-213ENST00000590234 TEX14Q8IWB6 1497 aa23.49■■□□□ 1.35
CXXC1-213ENST00000590234 ABCA9Q8IUA7 1624 aa23.49■■□□□ 1.35
CXXC1-213ENST00000590234 CCDC18Q5T9S5 1454 aa23.47■■□□□ 1.35
CXXC1-213ENST00000590234 KDM6BO15054 1643 aa23.47■■□□□ 1.35
CXXC1-213ENST00000590234 MAGI3Q5TCQ9 1506 aa23.46■■□□□ 1.35
CXXC1-213ENST00000590234 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
CXXC1-213ENST00000590234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.39■■□□□ 1.34
CXXC1-213ENST00000590234 TROQ12816 1431 aaPredicted RBP23.38■■□□□ 1.33
CXXC1-213ENST00000590234 TTC37Q6PGP7 1564 aa23.37■■□□□ 1.33
CXXC1-213ENST00000590234 KIF14Q15058 1648 aa23.35■■□□□ 1.33
CXXC1-213ENST00000590234 VPS8Q8N3P4 1428 aa23.32■■□□□ 1.32
CXXC1-213ENST00000590234 COL17A1Q9UMD9 1497 aaPredicted RBP23.31■■□□□ 1.32
CXXC1-213ENST00000590234 NEO1Q92859 1461 aa23.29■■□□□ 1.32
CXXC1-213ENST00000590234 PHLDB1Q86UU1 1377 aa23.27■■□□□ 1.32
CXXC1-213ENST00000590234 MYO5CQ9NQX4 1742 aa23.26■■□□□ 1.31
CXXC1-213ENST00000590234 CFAP74Q9C0B2 1584 aa23.26■■□□□ 1.31
CXXC1-213ENST00000590234 ARAP3Q8WWN8 1544 aa23.25■■□□□ 1.31
CXXC1-213ENST00000590234 PLCH2O75038 1416 aa23.25■■□□□ 1.31
CXXC1-213ENST00000590234 FANCAO15360 1455 aa23.24■■□□□ 1.31
CXXC1-213ENST00000590234 MTUS2Q5JR59 1369 aa23.21■■□□□ 1.31
CXXC1-213ENST00000590234 AKNAQ7Z591 1439 aa23.2■■□□□ 1.3
CXXC1-213ENST00000590234 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
CXXC1-213ENST00000590234 TIAM1Q13009 1591 aa23.18■■□□□ 1.3
CXXC1-213ENST00000590234 PREX2Q70Z35 1606 aa23.16■■□□□ 1.3
CXXC1-213ENST00000590234 ARHGAP5Q13017 1502 aa23.16■■□□□ 1.3
CXXC1-213ENST00000590234 EFCAB2Q5VUJ9 269 aa23.14■■□□□ 1.29
CXXC1-213ENST00000590234 CDC42BPBQ9Y5S2 1711 aa23.13■■□□□ 1.29
CXXC1-213ENST00000590234 DENND4BO75064 1496 aaPredicted RBP23.13■■□□□ 1.29
CXXC1-213ENST00000590234 CDC42BPAQ5VT25 1732 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms