RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

Gene TREM1, Length 1,876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-206ENST00000589882 DDX10Q13206 875 aaKnown RBP16.22■□□□□ 0.19
TREM1-206ENST00000589882 CEP164Q9UPV0 1460 aa16.22■□□□□ 0.19
TREM1-206ENST00000589882 WASHC2AQ641Q2 1341 aa16.21■□□□□ 0.19
TREM1-206ENST00000589882 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
TREM1-206ENST00000589882 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.19
TREM1-206ENST00000589882 KIF21BO75037 1637 aa16.21■□□□□ 0.19
TREM1-206ENST00000589882 RTN4Q9NQC3 1192 aaKnown RBP16.2■□□□□ 0.18
TREM1-206ENST00000589882 MROH2BQ7Z745 1585 aa16.19■□□□□ 0.18
TREM1-206ENST00000589882 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
TREM1-206ENST00000589882 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
TREM1-206ENST00000589882 WASHC2CQ9Y4E1 1318 aa16.16■□□□□ 0.18
TREM1-206ENST00000589882 WIZO95785 1651 aa16.15■□□□□ 0.18
TREM1-206ENST00000589882 GLIPR1L2Q4G1C9 344 aa16.15■□□□□ 0.18
TREM1-206ENST00000589882 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
TREM1-206ENST00000589882 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
TREM1-206ENST00000589882 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
TREM1-206ENST00000589882 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
TREM1-206ENST00000589882 IRX6P78412 446 aaPredicted RBP16.1■□□□□ 0.17
TREM1-206ENST00000589882 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.16
TREM1-206ENST00000589882 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
TREM1-206ENST00000589882 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
TREM1-206ENST00000589882 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
TREM1-206ENST00000589882 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
TREM1-206ENST00000589882 HMGXB3Q12766 1538 aa16.06■□□□□ 0.16
TREM1-206ENST00000589882 WDR97A6NE52 1622 aa16.05■□□□□ 0.16
TREM1-206ENST00000589882 PPM1GO15355 546 aaPredicted RBP16.04■□□□□ 0.16
TREM1-206ENST00000589882 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
TREM1-206ENST00000589882 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
TREM1-206ENST00000589882 B4GALNT3Q6L9W6 998 aa16.01■□□□□ 0.15
TREM1-206ENST00000589882 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
TREM1-206ENST00000589882 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
TREM1-206ENST00000589882 NEFMP07197 916 aa16■□□□□ 0.15
TREM1-206ENST00000589882 DAXXQ9UER7 740 aaPredicted RBP15.98■□□□□ 0.15
TREM1-206ENST00000589882 CCNB3Q8WWL7 1395 aa15.97■□□□□ 0.15
TREM1-206ENST00000589882 ERCC6Q03468 1493 aa15.96■□□□□ 0.15
TREM1-206ENST00000589882 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
TREM1-206ENST00000589882 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
TREM1-206ENST00000589882 FAM43AQ8N2R8 423 aa15.94■□□□□ 0.14
TREM1-206ENST00000589882 GSE1Q14687 1217 aa15.93■□□□□ 0.14
TREM1-206ENST00000589882 BRPF3Q9ULD4 1205 aa15.93■□□□□ 0.14
TREM1-206ENST00000589882 ZBED9Q6R2W3 1325 aa15.89■□□□□ 0.13
TREM1-206ENST00000589882 PODXL2Q9NZ53 605 aa15.88■□□□□ 0.13
TREM1-206ENST00000589882 SETD5Q9C0A6 1442 aa15.88■□□□□ 0.13
TREM1-206ENST00000589882 NESP48681 1621 aa15.88■□□□□ 0.13
TREM1-206ENST00000589882 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
TREM1-206ENST00000589882 SYNJ1O43426 1573 aa15.83■□□□□ 0.12
TREM1-206ENST00000589882 ZMYND15Q9H091 742 aa15.83■□□□□ 0.12
TREM1-206ENST00000589882 RAPGEF2Q9Y4G8 1499 aa15.83■□□□□ 0.12
TREM1-206ENST00000589882 DDRGK1Q96HY6 314 aa15.82■□□□□ 0.12
TREM1-206ENST00000589882 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
TREM1-206ENST00000589882 THOC2Q8NI27 1593 aaKnown RBP15.81■□□□□ 0.12
TREM1-206ENST00000589882 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
TREM1-206ENST00000589882 TCERG1O14776 1098 aaKnown RBP15.8■□□□□ 0.12
TREM1-206ENST00000589882 KANK4Q5T7N3 995 aaPredicted RBP15.8■□□□□ 0.12
TREM1-206ENST00000589882 SMG6Q86US8 1419 aaKnown RBP15.79■□□□□ 0.12
TREM1-206ENST00000589882 VSIG10Q8N0Z9 540 aa15.79■□□□□ 0.12
TREM1-206ENST00000589882 RNF123Q5XPI4 1314 aa15.78■□□□□ 0.12
TREM1-206ENST00000589882 FHAD1B1AJZ9 1412 aa15.77■□□□□ 0.12
TREM1-206ENST00000589882 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.11
TREM1-206ENST00000589882 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.11
TREM1-206ENST00000589882 MS4A1P11836 297 aa15.76■□□□□ 0.11
TREM1-206ENST00000589882 RRP9O43818 475 aaKnown RBP15.75■□□□□ 0.11
TREM1-206ENST00000589882 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
TREM1-206ENST00000589882 TONSLQ96HA7 1378 aa15.73■□□□□ 0.11
TREM1-206ENST00000589882 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
TREM1-206ENST00000589882 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
TREM1-206ENST00000589882 FRAT1Q92837 279 aaPredicted RBP15.73■□□□□ 0.11
TREM1-206ENST00000589882 NCOA2Q15596 1464 aa15.71■□□□□ 0.1
TREM1-206ENST00000589882 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
TREM1-206ENST00000589882 CNTLNQ9NXG0 1405 aa15.7■□□□□ 0.1
TREM1-206ENST00000589882 NFKBIBQ15653 356 aa15.69■□□□□ 0.1
TREM1-206ENST00000589882 MAP3K1Q13233 1512 aa15.69■□□□□ 0.1
TREM1-206ENST00000589882 PDE4AP27815 886 aa15.68■□□□□ 0.1
TREM1-206ENST00000589882 HSP90AA2PQ14568 343 aaPredicted RBP15.68■□□□□ 0.1
TREM1-206ENST00000589882 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
TREM1-206ENST00000589882 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
TREM1-206ENST00000589882 PDS5BQ9NTI5 1447 aa15.66■□□□□ 0.1
TREM1-206ENST00000589882 MRS2Q9HD23 443 aa15.65■□□□□ 0.1
TREM1-206ENST00000589882 HSP90AA1P07900 732 aaKnown RBP15.64■□□□□ 0.09
TREM1-206ENST00000589882 AKNAQ7Z591 1439 aa15.64■□□□□ 0.09
TREM1-206ENST00000589882 FAM9BQ8IZU0 186 aa15.63■□□□□ 0.09
TREM1-206ENST00000589882 RANGAP1P46060 587 aaPredicted RBP15.62■□□□□ 0.09
TREM1-206ENST00000589882 PRKRIP1Q9H875 184 aaPredicted RBP15.61■□□□□ 0.09
TREM1-206ENST00000589882 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
TREM1-206ENST00000589882 PRXQ9BXM0 1461 aa15.59■□□□□ 0.09
TREM1-206ENST00000589882 L1TD1Q5T7N2 865 aaKnown RBP15.59■□□□□ 0.09
TREM1-206ENST00000589882 TIAM1Q13009 1591 aa15.57■□□□□ 0.08
TREM1-206ENST00000589882 WDR62O43379 1518 aa15.57■□□□□ 0.08
TREM1-206ENST00000589882 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
TREM1-206ENST00000589882 CCDC184Q52MB2 194 aa15.55■□□□□ 0.08
TREM1-206ENST00000589882 NAP1L5Q96NT1 182 aaPredicted RBP15.55■□□□□ 0.08
TREM1-206ENST00000589882 PNNQ9H307 717 aaKnown RBP15.54■□□□□ 0.08
TREM1-206ENST00000589882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.54■□□□□ 0.08
TREM1-206ENST00000589882 DCAF11Q8TEB1 546 aa15.54■□□□□ 0.08
TREM1-206ENST00000589882 RRAGDQ9NQL2 400 aaPredicted RBP15.52■□□□□ 0.08
TREM1-206ENST00000589882 HSPA5P11021 654 aaKnown RBP15.51■□□□□ 0.07
TREM1-206ENST00000589882 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
TREM1-206ENST00000589882 CENPJQ9HC77 1338 aaPredicted RBP15.5■□□□□ 0.07
TREM1-206ENST00000589882 CLCN1P35523 988 aa15.5■□□□□ 0.07
TREM1-206ENST00000589882 NCOA1Q15788 1441 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms