RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
VAT1-206ENST00000589709 KIAA0586Q9BVV6 1533 aa21.17■□□□□ 0.98
VAT1-206ENST00000589709 CUL7Q14999 1698 aa21.17■□□□□ 0.98
VAT1-206ENST00000589709 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
VAT1-206ENST00000589709 NPM1P06748 294 aaKnown RBP eCLIP21.02■□□□□ 0.96
VAT1-206ENST00000589709 PTPRGP23470 1445 aa20.95■□□□□ 0.95
VAT1-206ENST00000589709 CARMIL2Q6F5E8 1435 aa20.95■□□□□ 0.95
VAT1-206ENST00000589709 RAPGEF2Q9Y4G8 1499 aa20.94■□□□□ 0.94
VAT1-206ENST00000589709 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
VAT1-206ENST00000589709 ADCY10Q96PN6 1610 aa20.94■□□□□ 0.94
VAT1-206ENST00000589709 TNIKQ9UKE5 1360 aa20.93■□□□□ 0.94
VAT1-206ENST00000589709 IQGAP2Q13576 1575 aa20.93■□□□□ 0.94
VAT1-206ENST00000589709 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
VAT1-206ENST00000589709 KIF13AQ9H1H9 1805 aa20.9■□□□□ 0.94
VAT1-206ENST00000589709 FAM69CQ0P6D2 419 aa20.9■□□□□ 0.94
VAT1-206ENST00000589709 DISP1Q96F81 1524 aa20.84■□□□□ 0.93
VAT1-206ENST00000589709 UGGT2Q9NYU1 1516 aa20.83■□□□□ 0.93
VAT1-206ENST00000589709 TTBK1Q5TCY1 1321 aaPredicted RBP20.82■□□□□ 0.92
VAT1-206ENST00000589709 DIP2BQ9P265 1576 aa20.82■□□□□ 0.92
VAT1-206ENST00000589709 ABCC2Q92887 1545 aa20.81■□□□□ 0.92
VAT1-206ENST00000589709 UHRF1BP1LA0JNW5 1464 aa20.81■□□□□ 0.92
VAT1-206ENST00000589709 UACAQ9BZF9 1416 aa20.79■□□□□ 0.92
VAT1-206ENST00000589709 PRXQ9BXM0 1461 aa20.77■□□□□ 0.92
VAT1-206ENST00000589709 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
VAT1-206ENST00000589709 KIAA0556O60303 1618 aa20.72■□□□□ 0.91
VAT1-206ENST00000589709 ASXL2Q76L83 1435 aa20.71■□□□□ 0.91
VAT1-206ENST00000589709 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
VAT1-206ENST00000589709 KDM5BQ9UGL1 1544 aa20.7■□□□□ 0.9
VAT1-206ENST00000589709 GOLGA3Q08378 1498 aa20.69■□□□□ 0.9
VAT1-206ENST00000589709 CTTNBP2Q8WZ74 1663 aa20.67■□□□□ 0.9
VAT1-206ENST00000589709 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
VAT1-206ENST00000589709 GLI2P10070 1586 aa20.66■□□□□ 0.9
VAT1-206ENST00000589709 TSPOAP1O95153 1857 aa20.6■□□□□ 0.89
VAT1-206ENST00000589709 KDM6BO15054 1643 aa20.6■□□□□ 0.89
VAT1-206ENST00000589709 EPRSP07814 1512 aaKnown RBP20.59■□□□□ 0.89
VAT1-206ENST00000589709 EEA1Q15075 1411 aa20.59■□□□□ 0.89
VAT1-206ENST00000589709 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.89
VAT1-206ENST00000589709 ABCA8O94911 1581 aa20.55■□□□□ 0.88
VAT1-206ENST00000589709 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
VAT1-206ENST00000589709 WDR7Q9Y4E6 1490 aa20.53■□□□□ 0.88
VAT1-206ENST00000589709 PPRC1Q5VV67 1664 aaKnown RBP20.52■□□□□ 0.88
VAT1-206ENST00000589709 MAP3K4Q9Y6R4 1608 aa20.5■□□□□ 0.87
VAT1-206ENST00000589709 TEX14Q8IWB6 1497 aa20.49■□□□□ 0.87
VAT1-206ENST00000589709 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
VAT1-206ENST00000589709 COL17A1Q9UMD9 1497 aaPredicted RBP20.44■□□□□ 0.86
VAT1-206ENST00000589709 SAMD9Q5K651 1589 aa20.44■□□□□ 0.86
VAT1-206ENST00000589709 KCNH8Q96L42 1107 aa20.43■□□□□ 0.86
VAT1-206ENST00000589709 KDM4FA0A1W2PPD8 638 aa20.42■□□□□ 0.86
VAT1-206ENST00000589709 CD109Q6YHK3 1445 aa20.41■□□□□ 0.86
VAT1-206ENST00000589709 ATP10BO94823 1461 aa20.41■□□□□ 0.86
VAT1-206ENST00000589709 MAGI3Q5TCQ9 1506 aa20.41■□□□□ 0.86
VAT1-206ENST00000589709 CFAP43Q8NDM7 1665 aa20.37■□□□□ 0.85
VAT1-206ENST00000589709 KIF21BO75037 1637 aa20.35■□□□□ 0.85
VAT1-206ENST00000589709 ARID3CA6NKF2 412 aa20.35■□□□□ 0.85
VAT1-206ENST00000589709 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
VAT1-206ENST00000589709 RAPGEF6Q8TEU7 1601 aa20.32■□□□□ 0.84
VAT1-206ENST00000589709 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
VAT1-206ENST00000589709 FHOD3Q2V2M9 1422 aa20.3■□□□□ 0.84
VAT1-206ENST00000589709 NUP153P49790 1475 aaKnown RBP20.29■□□□□ 0.84
VAT1-206ENST00000589709 EFCAB5A4FU69 1503 aa20.28■□□□□ 0.84
VAT1-206ENST00000589709 PHLDB1Q86UU1 1377 aa20.27■□□□□ 0.84
VAT1-206ENST00000589709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
VAT1-206ENST00000589709 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.84
VAT1-206ENST00000589709 ABCA9Q8IUA7 1624 aa20.25■□□□□ 0.83
VAT1-206ENST00000589709 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
VAT1-206ENST00000589709 ADGRL1O94910 1474 aa20.24■□□□□ 0.83
VAT1-206ENST00000589709 PLEKHD1A6NEE1 506 aa20.23■□□□□ 0.83
VAT1-206ENST00000589709 UBTFP17480 764 aaKnown RBP20.23■□□□□ 0.83
VAT1-206ENST00000589709 NEO1Q92859 1461 aa20.18■□□□□ 0.82
VAT1-206ENST00000589709 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
VAT1-206ENST00000589709 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
VAT1-206ENST00000589709 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
VAT1-206ENST00000589709 RAPGEF3O95398 923 aa20.11■□□□□ 0.81
VAT1-206ENST00000589709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.07■□□□□ 0.85e-8■■■■■ 28.6
VAT1-206ENST00000589709 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
VAT1-206ENST00000589709 AKNAQ7Z591 1439 aa20.04■□□□□ 0.8
VAT1-206ENST00000589709 CDK11AQ9UQ88 783 aaPredicted RBP20.04■□□□□ 0.8
VAT1-206ENST00000589709 FANCAO15360 1455 aa20.04■□□□□ 0.8
VAT1-206ENST00000589709 ATP1B4Q9UN42 357 aaPredicted RBP20.03■□□□□ 0.8
VAT1-206ENST00000589709 HECW1Q76N89 1606 aa20.02■□□□□ 0.8
VAT1-206ENST00000589709 DENND4BO75064 1496 aaPredicted RBP20.02■□□□□ 0.8
VAT1-206ENST00000589709 FRMPD1Q5SYB0 1578 aa20■□□□□ 0.79
VAT1-206ENST00000589709 TTC37Q6PGP7 1564 aa20■□□□□ 0.79
VAT1-206ENST00000589709 PLCH2O75038 1416 aa20■□□□□ 0.79
VAT1-206ENST00000589709 CFAP74Q9C0B2 1584 aa20■□□□□ 0.79
VAT1-206ENST00000589709 TROQ12816 1431 aaPredicted RBP19.94■□□□□ 0.78
VAT1-206ENST00000589709 RICTORQ6R327 1708 aa19.94■□□□□ 0.78
VAT1-206ENST00000589709 EFCAB2Q5VUJ9 269 aa19.94■□□□□ 0.78
VAT1-206ENST00000589709 ADAMTSL3P82987 1691 aa19.92■□□□□ 0.78
VAT1-206ENST00000589709 ARID4BQ4LE39 1312 aaPredicted RBP19.92■□□□□ 0.78
VAT1-206ENST00000589709 CASKIN1Q8WXD9 1431 aa19.92■□□□□ 0.78
VAT1-206ENST00000589709 SCAPERQ9BY12 1400 aa19.92■□□□□ 0.78
VAT1-206ENST00000589709 MAGI2Q86UL8 1455 aa19.92■□□□□ 0.78
VAT1-206ENST00000589709 ZMYM4Q5VZL5 1548 aa19.92■□□□□ 0.78
VAT1-206ENST00000589709 ARHGEF40Q8TER5 1519 aa19.91■□□□□ 0.78
VAT1-206ENST00000589709 CLIP1P30622 1438 aa19.9■□□□□ 0.78
VAT1-206ENST00000589709 HECW2Q9P2P5 1572 aa19.9■□□□□ 0.78
VAT1-206ENST00000589709 PTPRMP28827 1452 aa19.88■□□□□ 0.77
VAT1-206ENST00000589709 POGZQ7Z3K3 1410 aa19.88■□□□□ 0.77
VAT1-206ENST00000589709 KIF14Q15058 1648 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms