RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
VPS25-202ENST00000589219 GRIN2AQ12879 1464 aa15.74■□□□□ 0.11
VPS25-202ENST00000589219 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
VPS25-202ENST00000589219 ADAMTS12P58397 1594 aa15.73■□□□□ 0.11
VPS25-202ENST00000589219 ERICH3Q5RHP9 1530 aa15.72■□□□□ 0.11
VPS25-202ENST00000589219 FHAD1B1AJZ9 1412 aa15.71■□□□□ 0.11
VPS25-202ENST00000589219 RUSC2Q8N2Y8 1516 aa15.71■□□□□ 0.11
VPS25-202ENST00000589219 CEP162Q5TB80 1403 aa15.69■□□□□ 0.1
VPS25-202ENST00000589219 HRCP23327 699 aa15.69■□□□□ 0.1
VPS25-202ENST00000589219 NUP160Q12769 1436 aa15.68■□□□□ 0.1
VPS25-202ENST00000589219 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
VPS25-202ENST00000589219 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
VPS25-202ENST00000589219 SHROOM2Q13796 1616 aa15.61■□□□□ 0.09
VPS25-202ENST00000589219 ERCC6L2Q5T890 1561 aa15.59■□□□□ 0.09
VPS25-202ENST00000589219 KIF27Q86VH2 1401 aa15.55■□□□□ 0.08
VPS25-202ENST00000589219 PLPPR3Q6T4P5 718 aa15.55■□□□□ 0.08
VPS25-202ENST00000589219 JPH4Q96JJ6 628 aa15.54■□□□□ 0.08
VPS25-202ENST00000589219 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
VPS25-202ENST00000589219 PRG4Q92954 1404 aaPredicted RBP15.53■□□□□ 0.08
VPS25-202ENST00000589219 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
VPS25-202ENST00000589219 RAPGEF2Q9Y4G8 1499 aa15.52■□□□□ 0.08
VPS25-202ENST00000589219 CUL7Q14999 1698 aa15.51■□□□□ 0.07
VPS25-202ENST00000589219 IGF1RP08069 1367 aa15.49■□□□□ 0.07
VPS25-202ENST00000589219 CLIP1P30622 1438 aa15.49■□□□□ 0.07
VPS25-202ENST00000589219 KIAA0586Q9BVV6 1533 aa15.45■□□□□ 0.06
VPS25-202ENST00000589219 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
VPS25-202ENST00000589219 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
VPS25-202ENST00000589219 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
VPS25-202ENST00000589219 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
VPS25-202ENST00000589219 KIF13AQ9H1H9 1805 aa15.38■□□□□ 0.05
VPS25-202ENST00000589219 ADCY10Q96PN6 1610 aa15.34■□□□□ 0.05
VPS25-202ENST00000589219 CARMIL2Q6F5E8 1435 aa15.34■□□□□ 0.05
VPS25-202ENST00000589219 MAPKBP1O60336 1514 aa15.33■□□□□ 0.05
VPS25-202ENST00000589219 ABCC10Q5T3U5 1492 aa15.32■□□□□ 0.04
VPS25-202ENST00000589219 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
VPS25-202ENST00000589219 PTPRGP23470 1445 aa15.31■□□□□ 0.04
VPS25-202ENST00000589219 FAM69CQ0P6D2 419 aa15.3■□□□□ 0.04
VPS25-202ENST00000589219 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
VPS25-202ENST00000589219 DIP2BQ9P265 1576 aa15.27■□□□□ 0.03
VPS25-202ENST00000589219 PPARGC1BQ86YN6 1023 aaKnown RBP15.26■□□□□ 0.03
VPS25-202ENST00000589219 TTBK1Q5TCY1 1321 aaPredicted RBP15.24■□□□□ 0.03
VPS25-202ENST00000589219 ARHGAP35Q9NRY4 1499 aa15.22■□□□□ 0.03
VPS25-202ENST00000589219 ABCC2Q92887 1545 aa15.22■□□□□ 0.03
VPS25-202ENST00000589219 APLP2Q06481 763 aa15.21■□□□□ 0.03
VPS25-202ENST00000589219 DISP1Q96F81 1524 aa15.21■□□□□ 0.03
VPS25-202ENST00000589219 UGGT2Q9NYU1 1516 aa15.21■□□□□ 0.03
VPS25-202ENST00000589219 MSH5O43196 834 aa15.2■□□□□ 0.02
VPS25-202ENST00000589219 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
VPS25-202ENST00000589219 UHRF1BP1LA0JNW5 1464 aa15.2■□□□□ 0.02
VPS25-202ENST00000589219 UACAQ9BZF9 1416 aa15.18■□□□□ 0.02
VPS25-202ENST00000589219 ADRA2BP18089 450 aa15.18■□□□□ 0.02
VPS25-202ENST00000589219 PLB1Q6P1J6 1458 aa15.18■□□□□ 0.02
VPS25-202ENST00000589219 CTTNBP2Q8WZ74 1663 aa15.18■□□□□ 0.02
VPS25-202ENST00000589219 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
VPS25-202ENST00000589219 KIAA0556O60303 1618 aa15.16■□□□□ 0.02
VPS25-202ENST00000589219 KDM6BO15054 1643 aa15.15■□□□□ 0.02
VPS25-202ENST00000589219 ASXL2Q76L83 1435 aa15.15■□□□□ 0.02
VPS25-202ENST00000589219 MAP3K1Q13233 1512 aa15.14■□□□□ 0.01
VPS25-202ENST00000589219 PIAS4Q8N2W9 510 aaPredicted RBP15.14■□□□□ 0.01
VPS25-202ENST00000589219 GLI2P10070 1586 aa15.13■□□□□ 0.01
VPS25-202ENST00000589219 KDM5BQ9UGL1 1544 aa15.12■□□□□ 0.01
VPS25-202ENST00000589219 ZCCHC11Q5TAX3 1644 aaKnown RBP15.1■□□□□ 0.01
VPS25-202ENST00000589219 RANGAP1P46060 587 aaPredicted RBP15.09■□□□□ 0.01
VPS25-202ENST00000589219 TIAM1Q13009 1591 aa15.07■□□□□ 0
VPS25-202ENST00000589219 CFAP43Q8NDM7 1665 aa15.06■□□□□ 0
VPS25-202ENST00000589219 EPRSP07814 1512 aaKnown RBP15.06■□□□□ 0
VPS25-202ENST00000589219 CCER1Q8TC90 406 aaPredicted RBP15.05■□□□□ -0
VPS25-202ENST00000589219 PPRC1Q5VV67 1664 aaKnown RBP15.05■□□□□ -0
VPS25-202ENST00000589219 MAP3K4Q9Y6R4 1608 aa15.04■□□□□ -0
VPS25-202ENST00000589219 PCF11O94913 1555 aaKnown RBP15.03■□□□□ -0
VPS25-202ENST00000589219 TEX14Q8IWB6 1497 aa15.03■□□□□ -0
VPS25-202ENST00000589219 FYCO1Q9BQS8 1478 aa15.03■□□□□ -0
VPS25-202ENST00000589219 RRBP1Q9P2E9 1410 aaKnown RBP15.03■□□□□ -0
VPS25-202ENST00000589219 WDR7Q9Y4E6 1490 aa15.02■□□□□ -0
VPS25-202ENST00000589219 ABCA8O94911 1581 aa15.02□□□□□ -0.01
VPS25-202ENST00000589219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
VPS25-202ENST00000589219 SAMD9Q5K651 1589 aa15.01□□□□□ -0.01
VPS25-202ENST00000589219 CASKIN1Q8WXD9 1431 aa14.98□□□□□ -0.01
VPS25-202ENST00000589219 FMN1Q68DA7 1419 aa14.97□□□□□ -0.01
VPS25-202ENST00000589219 LRRC9Q6ZRR7 1453 aa14.96□□□□□ -0.01
VPS25-202ENST00000589219 FHOD3Q2V2M9 1422 aa14.95□□□□□ -0.02
VPS25-202ENST00000589219 KDM4FA0A1W2PPD8 638 aa14.94□□□□□ -0.02
VPS25-202ENST00000589219 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
VPS25-202ENST00000589219 P3H3Q8IVL6 736 aa14.94□□□□□ -0.02
VPS25-202ENST00000589219 KCNH8Q96L42 1107 aa14.94□□□□□ -0.02
VPS25-202ENST00000589219 CD109Q6YHK3 1445 aa14.93□□□□□ -0.02
VPS25-202ENST00000589219 CCNB3Q8WWL7 1395 aa14.92□□□□□ -0.02
VPS25-202ENST00000589219 MAGI3Q5TCQ9 1506 aa14.92□□□□□ -0.02
VPS25-202ENST00000589219 COL17A1Q9UMD9 1497 aaPredicted RBP14.91□□□□□ -0.02
VPS25-202ENST00000589219 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
VPS25-202ENST00000589219 ATP10BO94823 1461 aa14.89□□□□□ -0.03
VPS25-202ENST00000589219 RAPGEF6Q8TEU7 1601 aa14.88□□□□□ -0.03
VPS25-202ENST00000589219 ARID3CA6NKF2 412 aa14.86□□□□□ -0.03
VPS25-202ENST00000589219 CLSPNQ9HAW4 1339 aa14.86□□□□□ -0.03
VPS25-202ENST00000589219 ADGRL1O94910 1474 aa14.85□□□□□ -0.03
VPS25-202ENST00000589219 CCDC18Q5T9S5 1454 aa14.83□□□□□ -0.03
VPS25-202ENST00000589219 ABCA9Q8IUA7 1624 aa14.83□□□□□ -0.04
VPS25-202ENST00000589219 HECW1Q76N89 1606 aa14.82□□□□□ -0.04
VPS25-202ENST00000589219 PHLDB1Q86UU1 1377 aa14.82□□□□□ -0.04
VPS25-202ENST00000589219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms