RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 CUL7Q14999 1698 aa14.19□□□□□ -0.14
KDM4B-207ENST00000588961 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
KDM4B-207ENST00000588961 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
KDM4B-207ENST00000588961 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
KDM4B-207ENST00000588961 NUP160Q12769 1436 aa14.15□□□□□ -0.14
KDM4B-207ENST00000588961 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
KDM4B-207ENST00000588961 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
KDM4B-207ENST00000588961 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
KDM4B-207ENST00000588961 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
KDM4B-207ENST00000588961 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
KDM4B-207ENST00000588961 ARHGEF11O15085 1522 aa14.11□□□□□ -0.15
KDM4B-207ENST00000588961 EEA1Q15075 1411 aa14.09□□□□□ -0.15
KDM4B-207ENST00000588961 MAPK8IP2Q13387 824 aaPredicted RBP14.08□□□□□ -0.16
KDM4B-207ENST00000588961 PRXQ9BXM0 1461 aa14.07□□□□□ -0.16
KDM4B-207ENST00000588961 JPH4Q96JJ6 628 aa14.07□□□□□ -0.16
KDM4B-207ENST00000588961 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
KDM4B-207ENST00000588961 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
KDM4B-207ENST00000588961 EHMT2Q96KQ7 1210 aa14.04□□□□□ -0.16
KDM4B-207ENST00000588961 ERCC6L2Q5T890 1561 aa14.04□□□□□ -0.16
KDM4B-207ENST00000588961 SHROOM2Q13796 1616 aa14.02□□□□□ -0.16
KDM4B-207ENST00000588961 PRG4Q92954 1404 aaPredicted RBP14.02□□□□□ -0.16
KDM4B-207ENST00000588961 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
KDM4B-207ENST00000588961 IQGAP2Q13576 1575 aa13.99□□□□□ -0.17
KDM4B-207ENST00000588961 CTTNBP2Q8WZ74 1663 aa13.95□□□□□ -0.18
KDM4B-207ENST00000588961 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
KDM4B-207ENST00000588961 KIF21BO75037 1637 aa13.94□□□□□ -0.18
KDM4B-207ENST00000588961 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
KDM4B-207ENST00000588961 RANGAP1P46060 587 aaPredicted RBP13.93□□□□□ -0.18
KDM4B-207ENST00000588961 DMRT2Q9Y5R5 561 aa13.93□□□□□ -0.18
KDM4B-207ENST00000588961 UBTFP17480 764 aaKnown RBP13.92□□□□□ -0.18
KDM4B-207ENST00000588961 CARMIL2Q6F5E8 1435 aa13.9□□□□□ -0.18
KDM4B-207ENST00000588961 UGGT2Q9NYU1 1516 aa13.9□□□□□ -0.18
KDM4B-207ENST00000588961 DISP1Q96F81 1524 aa13.9□□□□□ -0.19
KDM4B-207ENST00000588961 GOLGA3Q08378 1498 aa13.89□□□□□ -0.19
KDM4B-207ENST00000588961 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
KDM4B-207ENST00000588961 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
KDM4B-207ENST00000588961 PTPRGP23470 1445 aa13.86□□□□□ -0.19
KDM4B-207ENST00000588961 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
KDM4B-207ENST00000588961 LOC105371045A0A1W2PR82 267 aa13.84□□□□□ -0.19
KDM4B-207ENST00000588961 CNKSR2Q8WXI2 1034 aa13.84□□□□□ -0.19
KDM4B-207ENST00000588961 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
KDM4B-207ENST00000588961 SAMD9Q5K651 1589 aa13.78□□□□□ -0.2
KDM4B-207ENST00000588961 ADCY10Q96PN6 1610 aa13.77□□□□□ -0.21
KDM4B-207ENST00000588961 UACAQ9BZF9 1416 aa13.76□□□□□ -0.21
KDM4B-207ENST00000588961 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
KDM4B-207ENST00000588961 FHOD3Q2V2M9 1422 aa13.75□□□□□ -0.21
KDM4B-207ENST00000588961 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
KDM4B-207ENST00000588961 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
KDM4B-207ENST00000588961 EFCAB5A4FU69 1503 aa13.72□□□□□ -0.21
KDM4B-207ENST00000588961 ABCC2Q92887 1545 aa13.71□□□□□ -0.21
KDM4B-207ENST00000588961 KCNA4P22459 653 aa13.71□□□□□ -0.21
KDM4B-207ENST00000588961 UHRF1BP1LA0JNW5 1464 aa13.71□□□□□ -0.21
KDM4B-207ENST00000588961 ARHGAP35Q9NRY4 1499 aa13.71□□□□□ -0.21
KDM4B-207ENST00000588961 ARID3CA6NKF2 412 aa13.7□□□□□ -0.22
KDM4B-207ENST00000588961 ABCA8O94911 1581 aa13.7□□□□□ -0.22
KDM4B-207ENST00000588961 CLIP1P30622 1438 aa13.66□□□□□ -0.22
KDM4B-207ENST00000588961 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
KDM4B-207ENST00000588961 KDM5BQ9UGL1 1544 aa13.65□□□□□ -0.22
KDM4B-207ENST00000588961 ATP1B4Q9UN42 357 aaPredicted RBP13.65□□□□□ -0.22
KDM4B-207ENST00000588961 ZCCHC11Q5TAX3 1644 aaKnown RBP13.64□□□□□ -0.23
KDM4B-207ENST00000588961 RAPGEF6Q8TEU7 1601 aa13.64□□□□□ -0.23
KDM4B-207ENST00000588961 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
KDM4B-207ENST00000588961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
KDM4B-207ENST00000588961 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
KDM4B-207ENST00000588961 CEP162Q5TB80 1403 aa13.63□□□□□ -0.23
KDM4B-207ENST00000588961 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
KDM4B-207ENST00000588961 FAM69CQ0P6D2 419 aa13.62□□□□□ -0.23
KDM4B-207ENST00000588961 ATP10BO94823 1461 aa13.61□□□□□ -0.23
KDM4B-207ENST00000588961 FMN1Q68DA7 1419 aa13.61□□□□□ -0.23
KDM4B-207ENST00000588961 NUP153P49790 1475 aaKnown RBP13.61□□□□□ -0.23
KDM4B-207ENST00000588961 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
KDM4B-207ENST00000588961 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
KDM4B-207ENST00000588961 ABCC10Q5T3U5 1492 aa13.59□□□□□ -0.23
KDM4B-207ENST00000588961 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
KDM4B-207ENST00000588961 KCNH8Q96L42 1107 aa13.58□□□□□ -0.24
KDM4B-207ENST00000588961 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
KDM4B-207ENST00000588961 DIP2BQ9P265 1576 aa13.57□□□□□ -0.24
KDM4B-207ENST00000588961 WDR7Q9Y4E6 1490 aa13.55□□□□□ -0.24
KDM4B-207ENST00000588961 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
KDM4B-207ENST00000588961 PCGF6Q9BYE7 350 aa13.54□□□□□ -0.24
KDM4B-207ENST00000588961 EPRSP07814 1512 aaKnown RBP13.54□□□□□ -0.24
KDM4B-207ENST00000588961 HECW1Q76N89 1606 aa13.53□□□□□ -0.24
KDM4B-207ENST00000588961 CASKIN1Q8WXD9 1431 aa13.53□□□□□ -0.24
KDM4B-207ENST00000588961 PCF11O94913 1555 aaKnown RBP13.53□□□□□ -0.24
KDM4B-207ENST00000588961 PLEKHD1A6NEE1 506 aa13.52□□□□□ -0.25
KDM4B-207ENST00000588961 HRCP23327 699 aa13.5□□□□□ -0.25
KDM4B-207ENST00000588961 LRRIQ1Q96JM4 1722 aa13.5□□□□□ -0.25
KDM4B-207ENST00000588961 GLI2P10070 1586 aa13.49□□□□□ -0.25
KDM4B-207ENST00000588961 TSPOAP1O95153 1857 aa13.48□□□□□ -0.25
KDM4B-207ENST00000588961 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
KDM4B-207ENST00000588961 CDK11AQ9UQ88 783 aaPredicted RBP13.46□□□□□ -0.25
KDM4B-207ENST00000588961 MAP3K4Q9Y6R4 1608 aa13.45□□□□□ -0.26
KDM4B-207ENST00000588961 CCDC18Q5T9S5 1454 aa13.44□□□□□ -0.26
KDM4B-207ENST00000588961 CD109Q6YHK3 1445 aa13.44□□□□□ -0.26
KDM4B-207ENST00000588961 VPS8Q8N3P4 1428 aa13.44□□□□□ -0.26
KDM4B-207ENST00000588961 ZEB1P37275 1124 aaPredicted RBP13.42□□□□□ -0.26
KDM4B-207ENST00000588961 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
KDM4B-207ENST00000588961 CFAP43Q8NDM7 1665 aa13.41□□□□□ -0.26
KDM4B-207ENST00000588961 MAGI3Q5TCQ9 1506 aa13.41□□□□□ -0.26
KDM4B-207ENST00000588961 TROQ12816 1431 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms