RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 RAPGEF2Q9Y4G8 1499 aa29.44■■■□□ 2.3
DNMT1-215ENST00000588913 PRXQ9BXM0 1461 aa29.42■■■□□ 2.3
DNMT1-215ENST00000588913 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
DNMT1-215ENST00000588913 KIAA0586Q9BVV6 1533 aa29.37■■■□□ 2.29
DNMT1-215ENST00000588913 CSRNP3Q8WYN3 585 aa29.34■■■□□ 2.29
DNMT1-215ENST00000588913 CYB5RLQ6IPT4 315 aa29.32■■■□□ 2.28
DNMT1-215ENST00000588913 JPH4Q96JJ6 628 aa29.32■■■□□ 2.28
DNMT1-215ENST00000588913 EEA1Q15075 1411 aa29.31■■■□□ 2.28
DNMT1-215ENST00000588913 PRG4Q92954 1404 aaPredicted RBP29.3■■■□□ 2.28
DNMT1-215ENST00000588913 IQGAP2Q13576 1575 aa29.25■■■□□ 2.27
DNMT1-215ENST00000588913 CTTNBP2Q8WZ74 1663 aa29.23■■■□□ 2.27
DNMT1-215ENST00000588913 KIF21BO75037 1637 aa29.14■■■□□ 2.26
DNMT1-215ENST00000588913 DISP1Q96F81 1524 aa29.11■■■□□ 2.25
DNMT1-215ENST00000588913 UGGT2Q9NYU1 1516 aa29.11■■■□□ 2.25
DNMT1-215ENST00000588913 EHMT2Q96KQ7 1210 aa29.06■■■□□ 2.24
DNMT1-215ENST00000588913 KIAA0556O60303 1618 aa29.02■■■□□ 2.24
DNMT1-215ENST00000588913 CARMIL2Q6F5E8 1435 aa28.97■■■□□ 2.23
DNMT1-215ENST00000588913 TTBK1Q5TCY1 1321 aaPredicted RBP28.95■■■□□ 2.23
DNMT1-215ENST00000588913 TNIKQ9UKE5 1360 aa28.93■■■□□ 2.22
DNMT1-215ENST00000588913 ADCY10Q96PN6 1610 aa28.93■■■□□ 2.22
DNMT1-215ENST00000588913 GOLGA3Q08378 1498 aa28.92■■■□□ 2.22
DNMT1-215ENST00000588913 PTPRGP23470 1445 aa28.91■■■□□ 2.22
DNMT1-215ENST00000588913 SAMD9Q5K651 1589 aa28.88■■■□□ 2.21
DNMT1-215ENST00000588913 RANGAP1P46060 587 aaPredicted RBP28.84■■■□□ 2.21
DNMT1-215ENST00000588913 P3H3Q8IVL6 736 aa28.83■■■□□ 2.21
DNMT1-215ENST00000588913 UBTFP17480 764 aaKnown RBP28.8■■■□□ 2.2
DNMT1-215ENST00000588913 PLB1Q6P1J6 1458 aa28.75■■■□□ 2.19
DNMT1-215ENST00000588913 UACAQ9BZF9 1416 aa28.74■■■□□ 2.19
DNMT1-215ENST00000588913 ABCC2Q92887 1545 aa28.72■■■□□ 2.19
DNMT1-215ENST00000588913 FHOD3Q2V2M9 1422 aa28.71■■■□□ 2.19
DNMT1-215ENST00000588913 UHRF1BP1LA0JNW5 1464 aa28.7■■■□□ 2.19
DNMT1-215ENST00000588913 ABCA8O94911 1581 aa28.7■■■□□ 2.19
DNMT1-215ENST00000588913 EFCAB5A4FU69 1503 aa28.65■■■□□ 2.18
DNMT1-215ENST00000588913 ARHGAP35Q9NRY4 1499 aa28.65■■■□□ 2.18
DNMT1-215ENST00000588913 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
DNMT1-215ENST00000588913 MAPKBP1O60336 1514 aa28.62■■■□□ 2.17
DNMT1-215ENST00000588913 ZCCHC11Q5TAX3 1644 aaKnown RBP28.61■■■□□ 2.17
DNMT1-215ENST00000588913 KDM5BQ9UGL1 1544 aa28.6■■■□□ 2.17
DNMT1-215ENST00000588913 KIF13AQ9H1H9 1805 aa28.59■■■□□ 2.17
DNMT1-215ENST00000588913 NPM1P06748 294 aaKnown RBP eCLIP28.56■■■□□ 2.16
DNMT1-215ENST00000588913 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
DNMT1-215ENST00000588913 RAPGEF6Q8TEU7 1601 aa28.55■■■□□ 2.16
DNMT1-215ENST00000588913 DIP2BQ9P265 1576 aa28.51■■■□□ 2.15
DNMT1-215ENST00000588913 ARID3CA6NKF2 412 aa28.51■■■□□ 2.15
DNMT1-215ENST00000588913 ASXL2Q76L83 1435 aa28.5■■■□□ 2.15
DNMT1-215ENST00000588913 ABCC10Q5T3U5 1492 aa28.49■■■□□ 2.15
DNMT1-215ENST00000588913 NUP153P49790 1475 aaKnown RBP28.48■■■□□ 2.15
DNMT1-215ENST00000588913 ATP10BO94823 1461 aa28.46■■■□□ 2.15
DNMT1-215ENST00000588913 CLIP1P30622 1438 aa28.42■■■□□ 2.14
DNMT1-215ENST00000588913 FAM69CQ0P6D2 419 aa28.39■■■□□ 2.14
DNMT1-215ENST00000588913 LRRIQ1Q96JM4 1722 aa28.36■■■□□ 2.13
DNMT1-215ENST00000588913 CEP162Q5TB80 1403 aa28.36■■■□□ 2.13
DNMT1-215ENST00000588913 EPRSP07814 1512 aaKnown RBP28.35■■■□□ 2.13
DNMT1-215ENST00000588913 WDR7Q9Y4E6 1490 aa28.35■■■□□ 2.13
DNMT1-215ENST00000588913 FMN1Q68DA7 1419 aa28.34■■■□□ 2.13
DNMT1-215ENST00000588913 CDK13Q14004 1512 aaKnown RBP28.32■■■□□ 2.12
DNMT1-215ENST00000588913 PCF11O94913 1555 aaKnown RBP28.32■■■□□ 2.12
DNMT1-215ENST00000588913 TSPOAP1O95153 1857 aa28.31■■■□□ 2.12
DNMT1-215ENST00000588913 GLI2P10070 1586 aa28.3■■■□□ 2.12
DNMT1-215ENST00000588913 PPRC1Q5VV67 1664 aaKnown RBP28.27■■■□□ 2.12
DNMT1-215ENST00000588913 HECW1Q76N89 1606 aa28.27■■■□□ 2.12
DNMT1-215ENST00000588913 MAP3K4Q9Y6R4 1608 aa28.24■■■□□ 2.11
DNMT1-215ENST00000588913 KCNH8Q96L42 1107 aa28.23■■■□□ 2.11
DNMT1-215ENST00000588913 ATP1B4Q9UN42 357 aaPredicted RBP28.22■■■□□ 2.11
DNMT1-215ENST00000588913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.22■■■□□ 2.11
DNMT1-215ENST00000588913 HNRNPUL2Q1KMD3 747 aaKnown RBP28.22■■■□□ 2.11
DNMT1-215ENST00000588913 CASKIN1Q8WXD9 1431 aa28.21■■■□□ 2.11
DNMT1-215ENST00000588913 FYCO1Q9BQS8 1478 aa28.13■■■□□ 2.09
DNMT1-215ENST00000588913 CFAP43Q8NDM7 1665 aa28.12■■■□□ 2.09
DNMT1-215ENST00000588913 ABCA9Q8IUA7 1624 aa28.11■■■□□ 2.09
DNMT1-215ENST00000588913 MAGI3Q5TCQ9 1506 aa28.09■■■□□ 2.09
DNMT1-215ENST00000588913 PLEKHD1A6NEE1 506 aa28.06■■■□□ 2.08
DNMT1-215ENST00000588913 CD109Q6YHK3 1445 aa28.06■■■□□ 2.08
DNMT1-215ENST00000588913 KIF14Q15058 1648 aa28.05■■■□□ 2.08
DNMT1-215ENST00000588913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.05■■■□□ 2.08
DNMT1-215ENST00000588913 TTC37Q6PGP7 1564 aa28.05■■■□□ 2.08
DNMT1-215ENST00000588913 CCDC18Q5T9S5 1454 aa28.02■■■□□ 2.08
DNMT1-215ENST00000588913 COL17A1Q9UMD9 1497 aaPredicted RBP28■■■□□ 2.07
DNMT1-215ENST00000588913 TROQ12816 1431 aaPredicted RBP27.98■■■□□ 2.07
DNMT1-215ENST00000588913 KDM6BO15054 1643 aa27.98■■■□□ 2.07
DNMT1-215ENST00000588913 VPS8Q8N3P4 1428 aa27.97■■■□□ 2.07
DNMT1-215ENST00000588913 TEX14Q8IWB6 1497 aa27.93■■■□□ 2.06
DNMT1-215ENST00000588913 CDK11AQ9UQ88 783 aaPredicted RBP27.88■■■□□ 2.05
DNMT1-215ENST00000588913 MYO5CQ9NQX4 1742 aa27.84■■■□□ 2.05
DNMT1-215ENST00000588913 TIAM1Q13009 1591 aa27.84■■■□□ 2.05
DNMT1-215ENST00000588913 PLCH2O75038 1416 aa27.8■■■□□ 2.04
DNMT1-215ENST00000588913 CDC42BPBQ9Y5S2 1711 aa27.79■■■□□ 2.04
DNMT1-215ENST00000588913 FANCAO15360 1455 aa27.78■■■□□ 2.04
DNMT1-215ENST00000588913 NEO1Q92859 1461 aa27.78■■■□□ 2.04
DNMT1-215ENST00000588913 CDC42BPAQ5VT25 1732 aa27.78■■■□□ 2.04
DNMT1-215ENST00000588913 ARAP3Q8WWN8 1544 aa27.76■■■□□ 2.04
DNMT1-215ENST00000588913 EHBP1L1Q8N3D4 1523 aa27.75■■■□□ 2.03
DNMT1-215ENST00000588913 MTUS2Q5JR59 1369 aa27.75■■■□□ 2.03
DNMT1-215ENST00000588913 PREX2Q70Z35 1606 aa27.75■■■□□ 2.03
DNMT1-215ENST00000588913 FRMPD1Q5SYB0 1578 aa27.74■■■□□ 2.03
DNMT1-215ENST00000588913 AKNAQ7Z591 1439 aa27.73■■■□□ 2.03
DNMT1-215ENST00000588913 KANK4Q5T7N3 995 aaPredicted RBP27.71■■■□□ 2.03
DNMT1-215ENST00000588913 CFAP74Q9C0B2 1584 aa27.71■■■□□ 2.03
DNMT1-215ENST00000588913 ARHGAP5Q13017 1502 aa27.69■■■□□ 2.02
DNMT1-215ENST00000588913 RAPGEF3O95398 923 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms