RNA–Protein interactions for RNA: ENST00000588316.1

GFAP-212, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 787 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-212ENST00000588316 CUL7Q14999 1698 aa30.13■■■□□ 2.41
GFAP-212ENST00000588316 CARMIL1Q5VZK9 1371 aa30.1■■■□□ 2.41
GFAP-212ENST00000588316 RUSC2Q8N2Y8 1516 aa30.08■■■□□ 2.41
GFAP-212ENST00000588316 KIAA0586Q9BVV6 1533 aa30.02■■■□□ 2.4
GFAP-212ENST00000588316 TTBK1Q5TCY1 1321 aaPredicted RBP29.92■■■□□ 2.38
GFAP-212ENST00000588316 NPM1P06748 294 aaKnown RBP eCLIP29.9■■■□□ 2.38
GFAP-212ENST00000588316 RAPGEF2Q9Y4G8 1499 aa29.82■■■□□ 2.36
GFAP-212ENST00000588316 CARMIL2Q6F5E8 1435 aa29.78■■■□□ 2.36
GFAP-212ENST00000588316 PTPRGP23470 1445 aa29.77■■■□□ 2.36
GFAP-212ENST00000588316 IQGAP2Q13576 1575 aa29.77■■■□□ 2.36
GFAP-212ENST00000588316 ADCY10Q96PN6 1610 aa29.71■■■□□ 2.35
GFAP-212ENST00000588316 TNIKQ9UKE5 1360 aa29.7■■■□□ 2.35
GFAP-212ENST00000588316 FAM69CQ0P6D2 419 aa29.68■■■□□ 2.34
GFAP-212ENST00000588316 KIF13AQ9H1H9 1805 aa29.64■■■□□ 2.34
GFAP-212ENST00000588316 DISP1Q96F81 1524 aa29.6■■■□□ 2.33
GFAP-212ENST00000588316 MAPKBP1O60336 1514 aa29.58■■■□□ 2.33
GFAP-212ENST00000588316 ABCC10Q5T3U5 1492 aa29.57■■■□□ 2.32
GFAP-212ENST00000588316 UGGT2Q9NYU1 1516 aa29.56■■■□□ 2.32
GFAP-212ENST00000588316 PRXQ9BXM0 1461 aa29.54■■■□□ 2.32
GFAP-212ENST00000588316 CSRNP3Q8WYN3 585 aa29.53■■■□□ 2.32
GFAP-212ENST00000588316 CTTNBP2Q8WZ74 1663 aa29.53■■■□□ 2.32
GFAP-212ENST00000588316 UACAQ9BZF9 1416 aa29.51■■■□□ 2.31
GFAP-212ENST00000588316 ABCC2Q92887 1545 aa29.48■■■□□ 2.31
GFAP-212ENST00000588316 KIAA0556O60303 1618 aa29.48■■■□□ 2.31
GFAP-212ENST00000588316 DIP2BQ9P265 1576 aa29.47■■■□□ 2.31
GFAP-212ENST00000588316 FAM9AQ8IZU1 332 aaPredicted RBP29.46■■■□□ 2.31
GFAP-212ENST00000588316 UHRF1BP1LA0JNW5 1464 aa29.43■■■□□ 2.3
GFAP-212ENST00000588316 GOLGA3Q08378 1498 aa29.41■■■□□ 2.3
GFAP-212ENST00000588316 TSPOAP1O95153 1857 aa29.4■■■□□ 2.3
GFAP-212ENST00000588316 ASXL2Q76L83 1435 aa29.4■■■□□ 2.3
GFAP-212ENST00000588316 P3H3Q8IVL6 736 aa29.38■■■□□ 2.29
GFAP-212ENST00000588316 PLB1Q6P1J6 1458 aa29.36■■■□□ 2.29
GFAP-212ENST00000588316 AEBP2Q6ZN18 517 aaPredicted RBP29.33■■■□□ 2.29
GFAP-212ENST00000588316 EEA1Q15075 1411 aa29.33■■■□□ 2.29
GFAP-212ENST00000588316 KDM5BQ9UGL1 1544 aa29.31■■■□□ 2.28
GFAP-212ENST00000588316 RANGAP1P46060 587 aaPredicted RBP29.31■■■□□ 2.28
GFAP-212ENST00000588316 ZCCHC11Q5TAX3 1644 aaKnown RBP29.29■■■□□ 2.28
GFAP-212ENST00000588316 CHIC1Q5VXU3 224 aa29.25■■■□□ 2.27
GFAP-212ENST00000588316 EHMT2Q96KQ7 1210 aa29.21■■■□□ 2.27
GFAP-212ENST00000588316 GLI2P10070 1586 aa29.21■■■□□ 2.27
GFAP-212ENST00000588316 KDM6BO15054 1643 aa29.2■■■□□ 2.27
GFAP-212ENST00000588316 ARID3CA6NKF2 412 aa29.2■■■□□ 2.26
GFAP-212ENST00000588316 ABCA8O94911 1581 aa29.19■■■□□ 2.26
GFAP-212ENST00000588316 KCNH8Q96L42 1107 aa29.19■■■□□ 2.26
GFAP-212ENST00000588316 EPRSP07814 1512 aaKnown RBP29.19■■■□□ 2.26
GFAP-212ENST00000588316 WDR7Q9Y4E6 1490 aa29.12■■■□□ 2.25
GFAP-212ENST00000588316 PPRC1Q5VV67 1664 aaKnown RBP29.09■■■□□ 2.25
GFAP-212ENST00000588316 SAMD9Q5K651 1589 aa29.09■■■□□ 2.25
GFAP-212ENST00000588316 UBTFP17480 764 aaKnown RBP29.07■■■□□ 2.24
GFAP-212ENST00000588316 MAP3K4Q9Y6R4 1608 aa29.06■■■□□ 2.24
GFAP-212ENST00000588316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.06■■■□□ 2.24
GFAP-212ENST00000588316 HNRNPUL2Q1KMD3 747 aaKnown RBP29.06■■■□□ 2.24
GFAP-212ENST00000588316 KIF21BO75037 1637 aa29.05■■■□□ 2.24
GFAP-212ENST00000588316 ATP10BO94823 1461 aa29.02■■■□□ 2.24
GFAP-212ENST00000588316 TEX14Q8IWB6 1497 aa29.01■■■□□ 2.23
GFAP-212ENST00000588316 FHOD3Q2V2M9 1422 aa29■■■□□ 2.23
GFAP-212ENST00000588316 CD109Q6YHK3 1445 aa28.99■■■□□ 2.23
GFAP-212ENST00000588316 RAPGEF6Q8TEU7 1601 aa28.97■■■□□ 2.23
GFAP-212ENST00000588316 COL17A1Q9UMD9 1497 aaPredicted RBP28.92■■■□□ 2.22
GFAP-212ENST00000588316 CFAP43Q8NDM7 1665 aa28.91■■■□□ 2.22
GFAP-212ENST00000588316 EFCAB5A4FU69 1503 aa28.86■■■□□ 2.21
GFAP-212ENST00000588316 MAGI3Q5TCQ9 1506 aa28.85■■■□□ 2.21
GFAP-212ENST00000588316 NUP153P49790 1475 aaKnown RBP28.85■■■□□ 2.21
GFAP-212ENST00000588316 KDM4FA0A1W2PPD8 638 aa28.84■■■□□ 2.21
GFAP-212ENST00000588316 ATP1B4Q9UN42 357 aaPredicted RBP28.84■■■□□ 2.21
GFAP-212ENST00000588316 PLEKHD1A6NEE1 506 aa28.82■■■□□ 2.2
GFAP-212ENST00000588316 ABCA9Q8IUA7 1624 aa28.73■■■□□ 2.19
GFAP-212ENST00000588316 ARHGAP35Q9NRY4 1499 aa28.7■■■□□ 2.18
GFAP-212ENST00000588316 FMN1Q68DA7 1419 aa28.67■■■□□ 2.18
GFAP-212ENST00000588316 CDK13Q14004 1512 aaKnown RBP28.64■■■□□ 2.17
GFAP-212ENST00000588316 PHLDB1Q86UU1 1377 aa28.63■■■□□ 2.17
GFAP-212ENST00000588316 ADGRL1O94910 1474 aa28.63■■■□□ 2.17
GFAP-212ENST00000588316 ARAP3Q8WWN8 1544 aa28.63■■■□□ 2.17
GFAP-212ENST00000588316 RAPGEF3O95398 923 aa28.62■■■□□ 2.17
GFAP-212ENST00000588316 NEO1Q92859 1461 aa28.58■■■□□ 2.17
GFAP-212ENST00000588316 CDK11AQ9UQ88 783 aaPredicted RBP28.57■■■□□ 2.16
GFAP-212ENST00000588316 HECW1Q76N89 1606 aa28.56■■■□□ 2.16
GFAP-212ENST00000588316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.54■■■□□ 2.16
GFAP-212ENST00000588316 AKNAQ7Z591 1439 aa28.49■■■□□ 2.15
GFAP-212ENST00000588316 TTC37Q6PGP7 1564 aa28.49■■■□□ 2.15
GFAP-212ENST00000588316 FANCAO15360 1455 aa28.47■■■□□ 2.15
GFAP-212ENST00000588316 DENND4BO75064 1496 aaPredicted RBP28.43■■■□□ 2.14
GFAP-212ENST00000588316 CFAP74Q9C0B2 1584 aa28.41■■■□□ 2.14
GFAP-212ENST00000588316 CLIP1P30622 1438 aa28.41■■■□□ 2.14
GFAP-212ENST00000588316 ARID4BQ4LE39 1312 aaPredicted RBP28.41■■■□□ 2.14
GFAP-212ENST00000588316 PLCH2O75038 1416 aa28.39■■■□□ 2.14
GFAP-212ENST00000588316 LRRIQ1Q96JM4 1722 aa28.39■■■□□ 2.14
GFAP-212ENST00000588316 CASKIN1Q8WXD9 1431 aa28.38■■■□□ 2.13
GFAP-212ENST00000588316 FRMPD1Q5SYB0 1578 aa28.37■■■□□ 2.13
GFAP-212ENST00000588316 TROQ12816 1431 aaPredicted RBP28.37■■■□□ 2.13
GFAP-212ENST00000588316 EFCAB2Q5VUJ9 269 aa28.37■■■□□ 2.13
GFAP-212ENST00000588316 PCF11O94913 1555 aaKnown RBP28.36■■■□□ 2.13
GFAP-212ENST00000588316 KIF14Q15058 1648 aa28.35■■■□□ 2.13
GFAP-212ENST00000588316 SCAPERQ9BY12 1400 aa28.33■■■□□ 2.13
GFAP-212ENST00000588316 RICTORQ6R327 1708 aa28.32■■■□□ 2.12
GFAP-212ENST00000588316 MYO5CQ9NQX4 1742 aa28.32■■■□□ 2.12
GFAP-212ENST00000588316 CCDC18Q5T9S5 1454 aa28.3■■■□□ 2.12
GFAP-212ENST00000588316 ARHGAP5Q13017 1502 aa28.26■■■□□ 2.11
GFAP-212ENST00000588316 FYCO1Q9BQS8 1478 aa28.25■■■□□ 2.11
GFAP-212ENST00000588316 MYT1LQ9UL68 1186 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms