RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 KIF13AQ9H1H9 1805 aa19.98■□□□□ 0.79
PRKCSH-207ENST00000588269 JPH4Q96JJ6 628 aa19.98■□□□□ 0.79
PRKCSH-207ENST00000588269 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
PRKCSH-207ENST00000588269 IGF1RP08069 1367 aa19.92■□□□□ 0.78
PRKCSH-207ENST00000588269 CARMIL1Q5VZK9 1371 aa19.86■□□□□ 0.77
PRKCSH-207ENST00000588269 ADCY10Q96PN6 1610 aa19.86■□□□□ 0.77
PRKCSH-207ENST00000588269 FAM69CQ0P6D2 419 aa19.83■□□□□ 0.77
PRKCSH-207ENST00000588269 KIAA0586Q9BVV6 1533 aa19.81■□□□□ 0.76
PRKCSH-207ENST00000588269 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
PRKCSH-207ENST00000588269 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
PRKCSH-207ENST00000588269 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
PRKCSH-207ENST00000588269 RAPGEF2Q9Y4G8 1499 aa19.77■□□□□ 0.76
PRKCSH-207ENST00000588269 NPM1P06748 294 aaKnown RBP eCLIP19.76■□□□□ 0.75
PRKCSH-207ENST00000588269 MAPKBP1O60336 1514 aa19.76■□□□□ 0.75
PRKCSH-207ENST00000588269 TSPOAP1O95153 1857 aa19.75■□□□□ 0.75
PRKCSH-207ENST00000588269 IQGAP2Q13576 1575 aa19.71■□□□□ 0.75
PRKCSH-207ENST00000588269 EEA1Q15075 1411 aa19.7■□□□□ 0.74
PRKCSH-207ENST00000588269 CARMIL2Q6F5E8 1435 aa19.67■□□□□ 0.74
PRKCSH-207ENST00000588269 PTPRGP23470 1445 aa19.66■□□□□ 0.74
PRKCSH-207ENST00000588269 KDM6BO15054 1643 aa19.65■□□□□ 0.74
PRKCSH-207ENST00000588269 PRXQ9BXM0 1461 aa19.63■□□□□ 0.73
PRKCSH-207ENST00000588269 CTTNBP2Q8WZ74 1663 aa19.61■□□□□ 0.73
PRKCSH-207ENST00000588269 TNIKQ9UKE5 1360 aa19.59■□□□□ 0.73
PRKCSH-207ENST00000588269 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
PRKCSH-207ENST00000588269 UGGT2Q9NYU1 1516 aa19.57■□□□□ 0.72
PRKCSH-207ENST00000588269 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
PRKCSH-207ENST00000588269 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
PRKCSH-207ENST00000588269 ASXL2Q76L83 1435 aa19.56■□□□□ 0.72
PRKCSH-207ENST00000588269 DISP1Q96F81 1524 aa19.56■□□□□ 0.72
PRKCSH-207ENST00000588269 PPRC1Q5VV67 1664 aaKnown RBP19.55■□□□□ 0.72
PRKCSH-207ENST00000588269 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
PRKCSH-207ENST00000588269 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
PRKCSH-207ENST00000588269 UACAQ9BZF9 1416 aa19.51■□□□□ 0.71
PRKCSH-207ENST00000588269 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
PRKCSH-207ENST00000588269 UHRF1BP1LA0JNW5 1464 aa19.48■□□□□ 0.71
PRKCSH-207ENST00000588269 PLB1Q6P1J6 1458 aa19.47■□□□□ 0.71
PRKCSH-207ENST00000588269 GLI2P10070 1586 aa19.45■□□□□ 0.7
PRKCSH-207ENST00000588269 KIF21BO75037 1637 aa19.45■□□□□ 0.7
PRKCSH-207ENST00000588269 ZCCHC11Q5TAX3 1644 aaKnown RBP19.45■□□□□ 0.7
PRKCSH-207ENST00000588269 COL17A1Q9UMD9 1497 aaPredicted RBP19.45■□□□□ 0.7
PRKCSH-207ENST00000588269 FAM9AQ8IZU1 332 aaPredicted RBP19.44■□□□□ 0.7
PRKCSH-207ENST00000588269 EPRSP07814 1512 aaKnown RBP19.43■□□□□ 0.7
PRKCSH-207ENST00000588269 KDM5BQ9UGL1 1544 aa19.42■□□□□ 0.7
PRKCSH-207ENST00000588269 MAP3K4Q9Y6R4 1608 aa19.4■□□□□ 0.7
PRKCSH-207ENST00000588269 ADGRL1O94910 1474 aa19.36■□□□□ 0.69
PRKCSH-207ENST00000588269 SAMD9Q5K651 1589 aa19.32■□□□□ 0.68
PRKCSH-207ENST00000588269 WDR7Q9Y4E6 1490 aa19.31■□□□□ 0.68
PRKCSH-207ENST00000588269 EFCAB5A4FU69 1503 aa19.3■□□□□ 0.68
PRKCSH-207ENST00000588269 ARID3CA6NKF2 412 aa19.3■□□□□ 0.68
PRKCSH-207ENST00000588269 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
PRKCSH-207ENST00000588269 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
PRKCSH-207ENST00000588269 ABCA8O94911 1581 aa19.27■□□□□ 0.68
PRKCSH-207ENST00000588269 P3H3Q8IVL6 736 aa19.25■□□□□ 0.67
PRKCSH-207ENST00000588269 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-207ENST00000588269 CD109Q6YHK3 1445 aa19.21■□□□□ 0.67
PRKCSH-207ENST00000588269 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
PRKCSH-207ENST00000588269 RANGAP1P46060 587 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-207ENST00000588269 RAPGEF6Q8TEU7 1601 aa19.18■□□□□ 0.66
PRKCSH-207ENST00000588269 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
PRKCSH-207ENST00000588269 ILDR1Q86SU0 546 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-207ENST00000588269 MAGI3Q5TCQ9 1506 aa19.16■□□□□ 0.66
PRKCSH-207ENST00000588269 HECW2Q9P2P5 1572 aa19.16■□□□□ 0.66
PRKCSH-207ENST00000588269 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
PRKCSH-207ENST00000588269 ATP10BO94823 1461 aa19.13■□□□□ 0.65
PRKCSH-207ENST00000588269 FMN1Q68DA7 1419 aa19.11■□□□□ 0.65
PRKCSH-207ENST00000588269 NUP153P49790 1475 aaKnown RBP19.06■□□□□ 0.64
PRKCSH-207ENST00000588269 ARHGAP35Q9NRY4 1499 aa19.05■□□□□ 0.64
PRKCSH-207ENST00000588269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
PRKCSH-207ENST00000588269 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
PRKCSH-207ENST00000588269 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
PRKCSH-207ENST00000588269 ABCA9Q8IUA7 1624 aa19.03■□□□□ 0.64
PRKCSH-207ENST00000588269 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.64
PRKCSH-207ENST00000588269 RAPGEF3O95398 923 aa19.02■□□□□ 0.64
PRKCSH-207ENST00000588269 FRMPD1Q5SYB0 1578 aa18.97■□□□□ 0.63
PRKCSH-207ENST00000588269 CLIP1P30622 1438 aa18.96■□□□□ 0.63
PRKCSH-207ENST00000588269 PLEKHD1A6NEE1 506 aa18.95■□□□□ 0.62
PRKCSH-207ENST00000588269 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
PRKCSH-207ENST00000588269 ADAMTSL3P82987 1691 aa18.92■□□□□ 0.62
PRKCSH-207ENST00000588269 CCDC18Q5T9S5 1454 aa18.91■□□□□ 0.62
PRKCSH-207ENST00000588269 CDK13Q14004 1512 aaKnown RBP18.91■□□□□ 0.62
PRKCSH-207ENST00000588269 ATP1B4Q9UN42 357 aaPredicted RBP18.91■□□□□ 0.62
PRKCSH-207ENST00000588269 PTPRMP28827 1452 aa18.9■□□□□ 0.62
PRKCSH-207ENST00000588269 NEO1Q92859 1461 aa18.9■□□□□ 0.62
PRKCSH-207ENST00000588269 FYCO1Q9BQS8 1478 aa18.9■□□□□ 0.62
PRKCSH-207ENST00000588269 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
PRKCSH-207ENST00000588269 CASKIN1Q8WXD9 1431 aa18.89■□□□□ 0.61
PRKCSH-207ENST00000588269 ARID4BQ4LE39 1312 aaPredicted RBP18.88■□□□□ 0.61
PRKCSH-207ENST00000588269 PCF11O94913 1555 aaKnown RBP18.88■□□□□ 0.61
PRKCSH-207ENST00000588269 MADDQ8WXG6 1647 aa18.88■□□□□ 0.61
PRKCSH-207ENST00000588269 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
PRKCSH-207ENST00000588269 TTC37Q6PGP7 1564 aa18.86■□□□□ 0.61
PRKCSH-207ENST00000588269 CFAP74Q9C0B2 1584 aa18.86■□□□□ 0.61
PRKCSH-207ENST00000588269 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.85■□□□□ 0.612e-23■□□□□ 8.5
PRKCSH-207ENST00000588269 RICTORQ6R327 1708 aa18.84■□□□□ 0.61
PRKCSH-207ENST00000588269 PLPPR3Q6T4P5 718 aa18.84■□□□□ 0.61
PRKCSH-207ENST00000588269 KIF14Q15058 1648 aa18.84■□□□□ 0.61
PRKCSH-207ENST00000588269 CEP162Q5TB80 1403 aa18.83■□□□□ 0.61
PRKCSH-207ENST00000588269 SIGLEC1Q9BZZ2 1709 aa18.83■□□□□ 0.61
PRKCSH-207ENST00000588269 ARHGEF40Q8TER5 1519 aa18.82■□□□□ 0.6
PRKCSH-207ENST00000588269 RIMS1Q86UR5 1692 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms